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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-31

575 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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GSC_CHICK ENSGALT00000017878 Homeobox protein goosecoid. [Source:Uniprot/SWISSPROT;Acc:P53545]
17.1692 -19.88 2.51903e-07 167 9 4 29 [+] picture button
ERD22_CHICK ENSGALT00000011481 ER lumen protein retaining receptor 2 (KDEL receptor 2) (KDEL endoplasmic reticulum protein retention receptor 2). [Source:Uniprot/SWISSPROT;Acc:Q5ZKX9]
16.1207 -20.87 4.54102e-07 1181 8 6 9 [+] picture button
FAM78A ENSGALT00000006013 Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0]
17.1226 -19.93 6.2273e-06 600 13 4 20 [+] picture button
Q75W80_CHICK ENSGALT00000014214 Prohormone convertase2 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q75W80]
16.0322 -18.44 8.18932e-06 117 3 3 10 [+] picture button
GSG1L ENSGALT00000021511 GSG1-like [Source:RefSeq_peptide;Acc:NP_653276]
17.7066 -25 9.36221e-06 600 16 2 18 [+] picture button
SLC25A28 ENSGALT00000012088 Mitoferrin-2 (Mitochondrial iron transporter 2) (Solute carrier family 25 member 28) (Mitochondrial RNA-splicing protein 3/4 homolog) (MRS3/4) (hMRS3/4). [Source:Uniprot/SWISSPROT;Acc:Q96A46]
18.2336 -26.69 1.12945e-05 600 18 5 26 [+] picture button
MAP4K5 ENSGALT00000020133 Mitogen-activated protein kinase kinase kinase kinase 5 (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 5) (MEK kinase kinase 5) (MEKKK 5) (Kinase homologous to SPS1/STE20) (KHS). [Source:Uniprot/SWISSPROT;Acc:Q9Y4K4]
17.9253 -19.93 1.44951e-05 478 11 7 23 [+] picture button
Q5ZL09_CHICK ENSGALT00000039032 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZL09]
16.244 -15.83 1.59758e-05 387 17 2 34 [+] picture button
NP_001012587.1 ENSGALT00000024267 S-adenosylmethionine decarboxylase 1 [Source:RefSeq_peptide;Acc:NP_001012587]
15.9283 -22.06 2.99503e-05 525 17 6 29 [+] picture button
APBB2 ENSGALT00000037427 Amyloid beta A4 precursor protein-binding family B member 2 (Fe65-like protein). [Source:Uniprot/SWISSPROT;Acc:Q92870]
16.5974 -16.78 5.3396e-05 339 14 7 27 [+] picture button
HMOX1_CHICK ENSGALT00000037765 Heme oxygenase 1 (EC 1.14.99.3) (HO-1). [Source:Uniprot/SWISSPROT;Acc:P14791]
18.6472 -23.88 7.61996e-05 586 12 2 22 [+] picture button
TAF1A ENSGALT00000015371 TATA box-binding protein-associated factor RNA polymerase I subunit A (TATA box-binding protein-associated factor 1A) (TBP-associated factor 1A) (TBP-associated factor RNA polymerase I 48 kDa) (TAFI48) (Transcription factor SL1). [Source:Uniprot/SWISSPROT;Acc:Q15573]
15.9185 -15.81 8.04623e-05 204 12 4 34 [+] picture button
GALE ENSGALT00000006441 UDP-glucose 4-epimerase (EC 5.1.3.2) (Galactowaldenase) (UDP-galactose 4-epimerase). [Source:Uniprot/SWISSPROT;Acc:Q14376]
16.4222 -19.69 8.32024e-05 580 16 3 27 [+] picture button
LIN52_CHICK ENSGALT00000032565 Lin-52 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5ZJQ3]
16.7581 -18.44 8.36109e-05 600 17 1 20 [+] picture button
A0M8U1_CHICK ENSGALT00000015281 Suppression of tumorigenicity 7, isoform a. [Source:Uniprot/SPTREMBL;Acc:A0M8U1]
17.0555 -16.27 9.0518e-05 225 11 11 36 [+] picture button
TMTC4 ENSGALT00000027257 Transmembrane and TPR repeat-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q5T4D3]
16.6527 -21.59 9.14221e-05 600 18 9 27 [+] picture button
GPR37L1 ENSGALT00000000849 Endothelin B receptor-like protein 2 precursor (ETBR-LP-2) (G-protein coupled receptor 37-like 1). [Source:Uniprot/SWISSPROT;Acc:O60883]
16.2311 -20.99 9.89844e-05 600 19 2 24 [+] picture button
TAF7 ENSGALT00000008006 Transcription initiation factor TFIID subunit 7 (Transcription initiation factor TFIID 55 kDa subunit) (TAF(II)55) (TAFII-55) (TAFII55). [Source:Uniprot/SWISSPROT;Acc:Q15545]
17.5626 -15.29 0.000108715 367 17 6 45 [+] picture button
TRIM42 ENSGALT00000008477 Tripartite motif-containing protein 42. [Source:Uniprot/SWISSPROT;Acc:Q8IWZ5]
18.289 -21.6 0.000112952 600 6 1 10 [+] picture button
ACSS2 ENSGALT00000005318 Acetyl-coenzyme A synthetase, cytoplasmic (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) (Acyl-CoA synthetase short-chain family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9NR19]
16.4732 -17.09 0.00011394 435 12 3 23 [+] picture button
NP_001001603.1 ENSGALT00000014117 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:RefSeq_peptide;Acc:NP_001001603]
16.0203 -18.3 0.000130659 600 16 1 26 [+] picture button
NP_001006296.1 ENSGALT00000012207 VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:RefSeq_peptide;Acc:NP_001006296]
17.2734 -17.4 0.00013589 437 16 4 34 [+] picture button
Q8AYS3_CHICK ENSGALT00000003814 RECQL5 protein. [Source:Uniprot/SPTREMBL;Acc:Q8AYS3]
16.2627 -14.95 0.000140826 383 13 2 29 [+] picture button
NP_001073942.1 ENSGALT00000026615 PREDICTED: similar to hypothetical protein FLJ14490 [Source:RefSeq_peptide_predicted;Acc:XP_371481] [from human gene ENSG00000173957]PREDICTED: similar to hypothetical protein FLJ14490 [Source:RefSeq_peptide_predicted;Acc:XP_371481] [from human gene ENSG00000173957] BY ORTHOLOGY TO:ENSXETT00000039480
16.7101 -17.68 0.000153338 600 9 2 16 [+] picture button
Q5F358_CHICK ENSGALT00000008057 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5F358]
16.0322 -15.19 0.000156788 255 12 8 28 [+] picture button
NP_989643.1 ENSGALT00000027671 Sin3A-associated protein, 18kDa [Source:RefSeq_peptide;Acc:NP_989643]
16.7318 -21.87 0.000170654 343 14 2 34 [+] picture button
NP_940961.1 ENSGALT00000029291 hypothetical protein LOC767803 [Source:RefSeq_peptide;Acc:NP_001070238]hypothetical protein LOC767803 [Source:RefSeq_peptide;Acc:NP_001070238] BY ORTHOLOGY TO:ENSDART00000091700
17.0864 -19.73 0.000183036 600 15 3 35 [+] picture button
COIL ENSGALT00000004998 Coilin (p80). [Source:Uniprot/SWISSPROT;Acc:P38432]
17.9737 -22.26 0.00018518 362 14 2 29 [+] picture button
CACNA2D4 ENSGALT00000037501 voltage-gated calcium channel alpha(2)delta-4 subunit [Source:RefSeq_peptide;Acc:NP_758952]
17.42 -24.44 0.000206703 497 22 2 43 [+] picture button
POP4 ENSGALT00000039493 Ribonuclease P protein subunit p29 (EC 3.1.26.5) (hPOP4). [Source:Uniprot/SWISSPROT;Acc:O95707]
18.4199 -17.95 0.000266618 247 12 5 39 [+] picture button
SEPT2 ENSGALT00000009328 Septin-2 (Protein NEDD5). [Source:Uniprot/SWISSPROT;Acc:Q15019]
16.4359 -17.18 0.000274319 472 21 2 36 [+] picture button
PGK_CHICK ENSGALT00000012893 Phosphoglycerate kinase (EC 2.7.2.3). [Source:Uniprot/SWISSPROT;Acc:P51903]
17.1943 -15.28 0.000277888 445 13 4 20 [+] picture button
CD109 ENSGALT00000025644 CD109 antigen precursor (p180) (150 KDa TGF-beta-1-binding protein) (r150) (Platelet-specific Gov antigen). [Source:Uniprot/SWISSPROT;Acc:Q6YHK3]
16.3655 -14.31 0.000278217 600 14 2 25 [+] picture button
SFRS12 ENSGALT00000023839 Splicing factor, arginine/serine-rich 12 (Serine-arginine-rich- splicing regulatory protein 86) (SRrp86) (Splicing regulatory protein 508) (SRrp508). [Source:Uniprot/SWISSPROT;Acc:Q8WXA9]
17.3429 -17.45 0.000283898 518 10 3 14 [+] picture button
RSU1 ENSGALT00000038283 Ras suppressor protein 1 (Rsu-1) (RSP-1). [Source:Uniprot/SWISSPROT;Acc:Q15404]
16.3365 -25.48 0.000299432 600 16 3 20 [+] picture button
NP_001004403.1 ENSGALT00000025338 stem-loop (histone) binding protein [Source:RefSeq_peptide;Acc:NP_001004403]
17.0961 -24.82 0.000304037 893 7 2 8 [+] picture button
CD2AP ENSGALT00000036677 CD2-associated protein (Cas ligand with multiple SH3 domains) (Adapter protein CMS). [Source:Uniprot/SWISSPROT;Acc:Q9Y5K6]
16.4104 -14.46 0.000308606 611 13 4 17 [+] picture button
BEGIN_HUMAN ENSGALT00000018326 Brain-enriched guanylate kinase-associated protein. [Source:Uniprot/SWISSPROT;Acc:Q9BUH8]
16.8429 -18.72 0.000313587 600 9 1 13 [+] picture button
NP_001026181.1 ENSGALT00000022169 geminin [Source:RefSeq_peptide;Acc:NP_001026181]
16.3783 -16.63 0.000319379 406 12 6 24 [+] picture button
RSBN1 ENSGALT00000002879 round spermatid basic protein 1 [Source:RefSeq_peptide;Acc:NP_060834]
16.6912 -14.83 0.000321261 600 13 7 23 [+] picture button
AHSG ENSGALT00000014007 Alpha-2-HS-glycoprotein precursor (Fetuin-A) (Alpha-2-Z-globulin) (Ba- alpha-2-glycoprotein) [Contains: Alpha-2-HS-glycoprotein chain A; Alpha-2-HS-glycoprotein chain B]. [Source:Uniprot/SWISSPROT;Acc:P02765]
18.0788 -29.19 0.0003572 296 15 2 39 [+] picture button
ENSGALT00000035901 NOT ANNOTATED
18.1925 -21.62 0.000360208 600 10 1 13 [+] picture button
C8orf76 ENSGALT00000026420 Uncharacterized protein C8orf76. [Source:Uniprot/SWISSPROT;Acc:Q96K31]
16.2596 -14.52 0.000363644 125 7 2 15 [+] picture button
NLE1 ENSGALT00000007475 Notchless homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q9NVX2]
16.2311 -19.74 0.000390677 600 17 2 23 [+] picture button
ACOX2 ENSGALT00000011555 Acyl-coenzyme A oxidase 2, peroxisomal (EC 1.17.99.3) (3-alpha,7- alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA 24-hydroxylase) (3- alpha,7-alpha,12-alpha-trihydroxy-5-beta-cholestanoyl-CoA oxidase) (Trihydroxycoprostanoyl-CoA oxidase) (THCCox) (THCA- [Source:Uniprot/SWISSPROT;Acc:Q99424]
16.2049 -12.4 0.000417236 476 13 1 22 [+] picture button
MYOHD1 ENSGALT00000039165 myosin head domain containing 1 isoform 1 [Source:RefSeq_peptide;Acc:NP_079385]
16.1946 -17.89 0.000428149 652 15 2 23 [+] picture button
PRPF39 ENSGALT00000020376 Pre-mRNA-processing factor 39 (PRP39 homolog). [Source:Uniprot/SWISSPROT;Acc:Q86UA1]
16.1815 -19.33 0.00044244 322 13 2 35 [+] picture button
SLC7A6OS ENSGALT00000001165 solute carrier family 7, member 6 opposite strand [Source:RefSeq_peptide;Acc:NP_115554]
19.3295 -18.53 0.000444427 265 12 2 38 [+] picture button
TCPQ_CHICK ENSGALT00000025510 T-complex protein 1 subunit theta (TCP-1-theta) (CCT-theta). [Source:Uniprot/SWISSPROT;Acc:Q6EE31]
17.6214 -14.72 0.000445771 473 14 2 25 [+] picture button
D2HGDH ENSGALT00000010258 D-2-hydroxyglutarate dehydrogenase, mitochondrial precursor (EC 1.1.99.-). [Source:Uniprot/SWISSPROT;Acc:Q8N465]
16.8635 -13.79 0.000449771 600 16 1 20 [+] picture button

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Download table: GFF TXT
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