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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-29b

749 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PXDN ENSGALT00000026413 peroxidasin homolog [Source:RefSeq_peptide;Acc:NP_036425]
17.9191 -19.71 4.22318e-10 485 14 7 30 [+] picture button
COL4A5 ENSGALT00000013221 Collagen alpha-5(IV) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P29400]
17.4142 -20.26 5.94948e-10 600 13 10 16 [+] picture button
GRIP1 ENSGALT00000016088 Glutamate receptor-interacting protein 1 (GRIP1 protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3R0]
15.8092 -16.66 1.49618e-09 600 12 11 18 [+] picture button
CO9A1_CHICK ENSGALT00000037052 Collagen alpha-1(IX) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12106]
16.4037 -19.24 2.63657e-09 947 15 1 19 [+] picture button
Q9I9K3_CHICK ENSGALT00000027197 Collagen IV a1 chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9I9K3]
16.9127 -20.52 9.27711e-09 506 16 7 31 [+] picture button
FEM1B ENSGALT00000038276 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]
16.6799 -19.24 1.25157e-08 600 12 1 18 [+] picture button
SESTD1 ENSGALT00000014692 SEC14 and spectrin domains 1 [Source:RefSeq_peptide;Acc:NP_835224]
18.6829 -17.04 1.52961e-08 606 12 10 14 [+] picture button
REV3L ENSGALT00000024245 DNA polymerase zeta catalytic subunit (EC 2.7.7.7) (hREV3). [Source:Uniprot/SWISSPROT;Acc:O60673]
18.8033 -15.72 1.65594e-08 330 16 9 45 [+] picture button
HDAC4_CHICK ENSGALT00000006822 Histone deacetylase 4 (HD4). [Source:Uniprot/SWISSPROT;Acc:P83038]
16.7848 -13.81 1.79166e-08 600 11 7 16 [+] picture button
ADAMTS7 ENSGALT00000013266 ADAM metallopeptidase with thrombospondin type 1 motif, 7 preproprotein [Source:RefSeq_peptide;Acc:NP_055087]
17.2154 -15.82 2.07757e-08 501 11 8 20 [+] picture button
Q9HCM6_HUMAN ENSGALT00000017236 Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]"Homolog of Homo sapiens "CXXC finger 6 [Source:UniGene;Acc:Hs.156905]" BY ORTHOLOGY TO:SINFRUT00000166785
15.9116 -15.1 3.40622e-08 600 8 3 12 [+] picture button
MAD2L1BP ENSGALT00000016766 MAD2L1-binding protein (Caught by MAD2 protein). [Source:Uniprot/SWISSPROT;Acc:Q15013]
16.3652 -21.06 3.83458e-08 600 13 1 19 [+] picture button
DGKD ENSGALT00000002654 Diacylglycerol kinase delta (EC 2.7.1.107) (Diglyceride kinase delta) (DGK-delta) (DAG kinase delta) (130 kDa diacylglycerol kinase). [Source:Uniprot/SWISSPROT;Acc:Q16760]
16.5224 -16.86 8.2816e-08 457 18 4 33 [+] picture button
BACH2 ENSGALT00000025160 Transcription regulator protein BACH2 (BTB and CNC homolog 2). [Source:Uniprot/SWISSPROT;Acc:Q9BYV9]
17.8448 -18.95 1.53955e-07 600 17 8 30 [+] picture button
NP_001026625.1 ENSGALT00000005028 iron-responsive element binding protein 2 [Source:RefSeq_peptide;Acc:NP_001026625]
19.0906 -17.7 2.28504e-07 304 15 9 44 [+] picture button
NM_001004400.2 ENSGALT00000037216 Gallus gallus tubulin, beta 2B (TUBB2B), mRNA. [Source:RefSeq_dna;Acc:NM_001004400]
17.3091 -16.55 2.41838e-07 230 10 8 32 [+] picture button
CO6A3_CHICK ENSGALT00000006250 Collagen alpha-3(VI) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P15989]
17.7739 -19.3 2.47284e-07 353 16 8 34 [+] picture button
FIGN ENSGALT00000018023 Fidgetin. [Source:Uniprot/SWISSPROT;Acc:Q5HY92]
16.1984 -17.43 2.77854e-07 600 18 11 30 [+] picture button
XR_026935.1 ENSGALT00000022483 PREDICTED: Gallus gallus similar to Tumor necrosis factor, alpha-induced protein 3 (Putative DNA-binding protein A20) (Zinc finger protein A20) (LOC421684), mRNA. [Source:RefSeq_dna;Acc:XR_026935]
17.6241 -19.94 3.08488e-07 600 12 2 23 [+] picture button
ENSGALT00000002304 ATPase family AAA domain-containing protein 3A. [Source:Uniprot/SWISSPROT;Acc:Q9NVI7]ATPase family AAA domain-containing protein 3A. [Source:Uniprot/SWISSPROT;Acc:Q9NVI7] BY ORTHOLOGY TO:SINFRUT00000174538
15.9515 -14.97 3.63771e-07 250 13 2 42 [+] picture button
PITPNM2 ENSGALT00000005779 Membrane-associated phosphatidylinositol transfer protein 2 (Phosphatidylinositol transfer protein, membrane-associated 2) (Pyk2 N-terminal domain-interacting receptor 3) (NIR-3). [Source:Uniprot/SWISSPROT;Acc:Q9BZ72]
16.3007 -15.78 4.98419e-07 600 15 2 23 [+] picture button
Q5TF58_HUMAN ENSGALT00000006046 Novel protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5TF58]
15.9176 -17.97 5.6273e-07 600 7 6 8 [+] picture button
CHIC2 ENSGALT00000022578 Cysteine-rich hydrophobic domain 2 protein (BrX-like translocated in leukemia). [Source:Uniprot/SWISSPROT;Acc:Q9UKJ5]
17.3091 -18.76 6.16868e-07 297 13 10 42 [+] picture button
NP_001013014.1 ENSGALT00000020009 KDEL receptor 3 [Source:RefSeq_peptide;Acc:NP_001013014]
16.7154 -14.53 8.6671e-07 793 10 3 11 [+] picture button
C9orf126 ENSGALT00000001535 Uncharacterized protein C9orf126. [Source:Uniprot/SWISSPROT;Acc:Q8N9R8]
19.2951 -21.34 1.32693e-06 307 14 3 29 [+] picture button
C20orf159 ENSGALT00000010442 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]
16.7064 -20.94 1.34755e-06 600 19 9 32 [+] picture button
PHF5A ENSGALT00000019497 PHD finger-like domain-containing protein 5A (PHD finger-like domain protein 5A) (Splicing factor 3B-associated 14 kDa protein) (SF3b14b). [Source:Uniprot/SWISSPROT;Acc:Q7RTV0]
17.0758 -18.89 1.42549e-06 621 15 2 17 [+] picture button
PHF10 ENSGALT00000018250 PHD finger protein 10 (XAP135). [Source:Uniprot/SWISSPROT;Acc:Q8WUB8]
16.4041 -16.52 2.08877e-06 142 6 5 14 [+] picture button
ENSGALT00000018906 KIF26A protein. [Source:Uniprot/SPTREMBL;Acc:Q96GK3]KIF26A protein. [Source:Uniprot/SPTREMBL;Acc:Q96GK3] BY ORTHOLOGY TO:ENSXETT00000049917
17.1239 -16.25 2.37861e-06 371 10 4 16 [+] picture button
NP_055654.2 ENSGALT00000008772 plasticity related gene 1 [Source:RefSeq_peptide;Acc:NP_055654]
16.575 -16.62 2.59077e-06 600 15 7 21 [+] picture button
CO3A1_CHICK ENSGALT00000004033 Collagen alpha-1(III) chain precursor (Fragments). [Source:Uniprot/SWISSPROT;Acc:P12105]
16.8801 -17.79 2.85587e-06 542 12 7 18 [+] picture button
NP_001009993.2 ENSGALT00000003405 p20 (LOC130074), mRNA [Source:RefSeq_dna;Acc:NM_001009993]
17.4374 -19.66 2.97085e-06 471 19 5 32 [+] picture button
KIAA1166 ENSGALT00000007513 Hepatocellular carcinoma-associated antigen 127. [Source:Uniprot/SWISSPROT;Acc:Q9NQZ6]
17.4142 -15.29 3.02846e-06 600 13 5 15 [+] picture button
NP_001006249.1 ENSGALT00000023070 polyhomeotic 1-like [Source:RefSeq_peptide;Acc:NP_001006249]
17.4118 -19.18 3.04098e-06 859 8 6 9 [+] picture button
NP_001010866.1 ENSGALT00000003980 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5SNT2]
16.7578 -16.27 3.10257e-06 600 12 3 19 [+] picture button
USP22 ENSGALT00000007615 Ubiquitin carboxyl-terminal hydrolase 22 (EC 3.1.2.15) (Ubiquitin thioesterase 22) (Ubiquitin-specific-processing protease 22) (Deubiquitinating enzyme 22). [Source:Uniprot/SWISSPROT;Acc:Q9UPT9]
16.3913 -13.53 3.13884e-06 579 14 4 19 [+] picture button
Q5F395_CHICK ENSGALT00000005217 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5F395]
17.2494 -15.04 4.5699e-06 438 15 1 23 [+] picture button
Q90796_CHICK ENSGALT00000008321 Alpha-1 type XI collagen (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90796]
16.7304 -14.91 5.12005e-06 474 15 9 22 [+] picture button
XR_027110.1 ENSGALT00000017913 PREDICTED: Gallus gallus similar to TAR RNA loop binding protein (LOC426665), mRNA. [Source:RefSeq_dna;Acc:XR_027110]
19.0061 -22.05 5.85521e-06 174 8 5 20 [+] picture button
MAP4K4 ENSGALT00000027092 Mitogen-activated protein kinase kinase kinase kinase 4 (EC 2.7.11.1) (MAPK/ERK kinase kinase kinase 4) (MEK kinase kinase 4) (MEKKK 4) (HPK/GCK-like kinase HGK) (Nck-interacting kinase). [Source:Uniprot/SWISSPROT;Acc:O95819]
17.4662 -19.46 6.70846e-06 329 13 4 38 [+] picture button
ELF2 ENSGALT00000015895 ETS-related transcription factor Elf-2 (E74-like factor 2) (New ETS- related factor). [Source:Uniprot/SWISSPROT;Acc:Q15723]
17.5192 -18.89 6.8394e-06 600 17 8 28 [+] picture button
TMEM38A ENSGALT00000035004 Transmembrane protein 38A. [Source:Uniprot/SWISSPROT;Acc:Q9H6F2]
16.0775 -16.14 8.0152e-06 317 14 4 35 [+] picture button
CXXC6 ENSGALT00000006478 CXXC-type zinc finger protein 6 (Leukemia-associated protein with a CXXC domain). [Source:Uniprot/SWISSPROT;Acc:Q8NFU7]
16.9362 -14.67 9.26551e-06 600 11 5 25 [+] picture button
NP_001026406.1 ENSGALT00000013413 TBP-associated factor 5 [Source:RefSeq_peptide;Acc:NP_001026406]
16.7902 -17.94 9.84141e-06 600 13 1 21 [+] picture button
ARPC3 ENSGALT00000006056 Actin-related protein 2/3 complex subunit 3 (ARP2/3 complex 21 kDa subunit) (p21-ARC). [Source:Uniprot/SWISSPROT;Acc:O15145]
17.1032 -15.55 1.07629e-05 475 14 4 28 [+] picture button
NP_001034869.1 ENSGALT00000039902 similar to cyclin I (FLJ16793), mRNA [Source:RefSeq_dna;Acc:NM_001039780]
16.1554 -18.91 1.10111e-05 600 13 1 23 [+] picture button
NP_116019.1 ENSGALT00000018551 cyclin-dependent kinase 2-interacting protein [Source:RefSeq_peptide;Acc:NP_116019]
16.4041 -16.03 1.12207e-05 131 5 2 9 [+] picture button
Q9PT85_CHICK ENSGALT00000011615 Proprotein convertase PACE4 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9PT85]
17.9373 -18.21 1.23636e-05 508 17 3 29 [+] picture button
DDX24 ENSGALT00000017692 ATP-dependent RNA helicase DDX24 (EC 3.6.1.-) (DEAD box protein 24). [Source:Uniprot/SWISSPROT;Acc:Q9GZR7]
18.7696 -20.98 1.30454e-05 415 16 4 36 [+] picture button
OTUD7A ENSGALT00000006032 OTU domain-containing protein 7A (EC 3.-.-.-) (Zinc finger protein Cezanne 2). [Source:Uniprot/SWISSPROT;Acc:Q8TE49]
16.2603 -16.8 1.32711e-05 600 10 1 16 [+] picture button

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Download table: GFF TXT
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