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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-1b

561 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NP_001025767.1 ENSGALT00000009145 inositol hexaphosphate kinase 2 [Source:RefSeq_peptide;Acc:NP_001025767]
18.1443 -17.91 0.000000000162292 600 11 10 16 [+] picture button
Q5ZIZ0_CHICK ENSGALT00000004426 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZIZ0]
16.5746 -9.51 0.000000000479126 162 10 7 30 [+] picture button
P25A_HUMAN ENSGALT00000020444 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
18.7465 -16.06 0.00000000271308 268 12 10 32 [+] picture button
CLCN3 ENSGALT00000015746 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51790]
17.9802 -16.63 0.000000018002 412 14 8 32 [+] picture button
NP_001005427.1 ENSGALT00000017555 mesenchyme homeobox 2 [Source:RefSeq_peptide;Acc:NP_001005427]
16.7767 -15.91 0.00000003623 944 7 8 8 [+] picture button
NUCL_CHICK ENSGALT00000012486 Nucleolin (Protein C23). [Source:Uniprot/SWISSPROT;Acc:P15771]
16.6422 -16.67 0.0000000802243 391 14 11 26 [+] picture button
GTF2B ENSGALT00000010015 Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II). [Source:Uniprot/SWISSPROT;Acc:Q00403]
16.5746 -13.32 0.00000013063 196 9 3 39 [+] picture button
MON2 ENSGALT00000038683 MON2 homolog [Source:RefSeq_peptide;Acc:NP_055841]
18.024 -19.05 0.000000240968 492 14 12 26 [+] picture button
LMBR1_CHICK ENSGALT00000031265 Limb region 1 protein homolog. [Source:Uniprot/SWISSPROT;Acc:Q7ZUA6]
16.1106 -14.85 0.000000428826 611 17 4 27 [+] picture button
NP_990158.1 ENSGALT00000034644 DEAD (Asp-Glu-Ala-Asp) box polypeptide 5 [Source:RefSeq_peptide;Acc:NP_990158]
19.2782 -18.96 0.000000971838 417 13 12 44 [+] picture button
NP_001006179.1 ENSGALT00000014296 Sec23 homolog B [Source:RefSeq_peptide;Acc:NP_001006179]
16.0681 -7.78 0.00000126223 349 13 5 27 [+] picture button
NP_001034376.1 ENSGALT00000019060 acetyl-Coenzyme A acetyltransferase 2 (acetoacetyl Coenzyme A thiolase) [Source:RefSeq_peptide;Acc:NP_001034376]
18.7465 -15.04 0.00000134754 282 12 2 30 [+] picture button
C4orf34 ENSGALT00000023145 Uncharacterized protein C4orf34. [Source:Uniprot/SWISSPROT;Acc:Q96QK8]
17.5528 -17.12 0.00000142361 365 14 7 35 [+] picture button
CNN3 ENSGALT00000039077 Calponin-3 (Calponin, acidic isoform). [Source:Uniprot/SWISSPROT;Acc:Q15417]
16.4685 -15.22 0.00000204061 430 14 8 33 [+] picture button
KLHL11 ENSGALT00000005592 Kelch-like protein 11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NVR0]
17.0525 -13.4 0.00000397616 600 16 5 30 [+] picture button
RSBN1L ENSGALT00000013555 round spermatid basic protein 1-like [Source:RefSeq_peptide;Acc:NP_940869]
18.6412 -15.92 0.00000484532 600 14 7 33 [+] picture button
PHF12 ENSGALT00000006417 PHD finger protein 12 (PHD factor 1) (Pf1). [Source:Uniprot/SWISSPROT;Acc:Q96QT6]
16.0763 -13.6 0.00000511698 600 17 9 34 [+] picture button
STC2 ENSGALT00000004561 Stanniocalcin-2 precursor (STC-2) (Stanniocalcin-related protein) (STCRP) (STC-related protein). [Source:Uniprot/SWISSPROT;Acc:O76061]
16.237 -14.28 0.00000513494 600 13 8 22 [+] picture button
CH60_CHICK ENSGALT00000013137 60 kDa heat shock protein, mitochondrial precursor (Hsp60) (60 kDa chaperonin) (CPN60) (Heat shock protein 60) (HSP-60). [Source:Uniprot/SWISSPROT;Acc:Q5ZL72]
17.0086 -10.7 0.00000644668 652 10 6 20 [+] picture button
RASA1 ENSGALT00000037665 Ras GTPase-activating protein 1 (GTPase-activating protein) (GAP) (Ras p21 protein activator) (p120GAP) (RasGAP). [Source:Uniprot/SWISSPROT;Acc:P20936]
16.1765 -11.36 0.00000707328 657 19 10 31 [+] picture button
GNPDA2 ENSGALT00000022980 glucosamine-6-phosphate deaminase 2 [Source:RefSeq_peptide;Acc:NP_612208]
17.7551 -15.54 0.00000741368 656 11 9 15 [+] picture button
NP_989988.1 ENSGALT00000037121 branched chain keto acid dehydrogenase E1, beta polypeptide [Source:RefSeq_peptide;Acc:NP_989988]
17.6932 -14.07 0.00000767986 340 12 3 31 [+] picture button
Q8UUQ8_CHICK ENSGALT00000008250 Clathrin heavy-chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8UUR0]
17.7028 -17.03 0.00000886571 884 9 10 11 [+] picture button
SHPRH ENSGALT00000020082 SNF2 histone linker PHD RING helicase isoform a [Source:RefSeq_peptide;Acc:NP_001036148]
16.1794 -11.09 0.0000123154 514 14 2 23 [+] picture button
NP_001026113.1 ENSGALT00000025501 E2F transcription factor 5 [Source:RefSeq_peptide;Acc:NP_001026113]
16.8033 -12.81 0.0000124521 298 16 9 44 [+] picture button
DOCK9 ENSGALT00000027273 Dedicator of cytokinesis protein 9 (Cdc42 guanine nucleotide exchange factor zizimin-1). [Source:Uniprot/SWISSPROT;Acc:Q9BZ29]
17.8731 -15.02 0.0000154325 435 17 5 35 [+] picture button
NP_001026547.1 ENSGALT00000001824 embryonic ectoderm development [Source:RefSeq_peptide;Acc:NP_001026547]
16.1174 -7.85 0.000016718 206 10 9 29 [+] picture button
XR_027038.1 ENSGALT00000024902 PREDICTED: Gallus gallus similar to choline transporter-like protein 1, splice (LOC427301), mRNA. [Source:RefSeq_dna;Acc:XR_027038]
17.954 -15.51 0.0000174364 355 10 3 22 [+] picture button
SPTLC1 ENSGALT00000021979 Serine palmitoyltransferase 1 (EC 2.3.1.50) (Long chain base biosynthesis protein 1) (LCB 1) (Serine-palmitoyl-CoA transferase 1) (SPT 1) (SPT1). [Source:Uniprot/SWISSPROT;Acc:O15269]
16.2876 -13.83 0.0000195349 604 12 1 15 [+] picture button
Q2MHD2_CHICK ENSGALT00000017361 Scaffold attachment factor A (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q2MHD2]
18.3343 -18.92 0.000020977 600 17 9 35 [+] picture button
ENSGALT00000003371 cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase]cpb-3 encodes a cytoplasmic polyadenylation element binding (CPEB) protein homolog. CPB-3 is dispensable for oogenesis, in contrast to CPEBs in vertebrates (Xenopus), arthropods (Drosophila), and molluscs (Spisula), which all participate in oogenesis. [Source: WormBase] BY ORTHOLOGY TO:B0414.5
17.8114 -15.85 0.0000214711 562 22 9 46 [+] picture button
ENSGALT00000034804 LOC565764 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P426]LOC565764 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q0P426] BY ORTHOLOGY TO:ENSDART00000023509
17.2875 -14.55 0.0000220753 352 14 3 31 [+] picture button
PDIK1L ENSGALT00000002218 Serine/threonine-protein kinase PDIK1L (EC 2.7.11.1) (PDLIM1- interacting kinase 1-like). [Source:Uniprot/SWISSPROT;Acc:Q8N165]
16.5229 -15.07 0.0000231441 600 18 7 31 [+] picture button
CCD93_CHICK ENSGALT00000019817 Coiled-coil domain-containing protein 93. [Source:Uniprot/SWISSPROT;Acc:Q5ZKI4]
17.9278 -16.82 0.0000248222 1110 12 1 12 [+] picture button
NBEA_CHICK ENSGALT00000027557 Protein neurobeachin (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9DDD5]
17.1644 -11.38 0.0000263304 354 11 6 26 [+] picture button
GDAP1L1 ENSGALT00000006862 Ganglioside-induced differentiation-associated protein 1-like 1 (GDAP1-L1). [Source:Uniprot/SWISSPROT;Acc:Q96MZ0]
16.5643 -14.62 0.0000266958 600 13 10 20 [+] picture button
HMGN1_CHICK ENSGALT00000025884 Nonhistone chromosomal protein HMG-14B. [Source:Uniprot/SWISSPROT;Acc:P12274]
16.0488 -15.41 0.0000277706 803 6 1 7 [+] picture button
NP_001006291.1 ENSGALT00000006710 tumor differentially expressed protein 1 [Source:RefSeq_peptide;Acc:NP_001006291]
16.4561 -16.04 0.0000281525 795 7 1 13 [+] picture button
TRIM2 ENSGALT00000014990 Tripartite motif-containing protein 2 (RING finger protein 86). [Source:Uniprot/SWISSPROT;Acc:Q9C040]
16.417 -13 0.0000285199 600 14 3 22 [+] picture button
SNF5_CHICK ENSGALT00000009622 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1. [Source:Uniprot/SWISSPROT;Acc:Q5ZK40]
16.4073 -10.69 0.000032214 328 15 8 42 [+] picture button
GUCY1B3 ENSGALT00000015246 Guanylate cyclase soluble subunit beta-1 (EC 4.6.1.2) (GCS-beta-1) (Soluble guanylate cyclase small subunit) (GCS-beta-3). [Source:Uniprot/SWISSPROT;Acc:Q02153]
16.346 -9.42 0.0000331225 255 11 2 37 [+] picture button
NP_001006299.1 ENSGALT00000040509 WD repeat domain 8 [Source:RefSeq_peptide;Acc:NP_001006299]
16.823 -20.47 0.0000339122 515 13 3 25 [+] picture button
PUR2_CHICK ENSGALT00000025758 Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6. [Source:Uniprot/SWISSPROT;Acc:P21872]
17.2507 -15.17 0.0000341221 520 15 2 20 [+] picture button
NP_001025773.1 ENSGALT00000036221 eukaryotic translation initiation factor 4E member 3 [Source:RefSeq_peptide;Acc:NP_001025773]
16.5974 -13.04 0.0000357075 495 16 5 27 [+] picture button
NP_990094.1 ENSGALT00000025442 ubiquitin-conjugating enzyme E2, J1 (UBC6 homolog, yeast) [Source:RefSeq_peptide;Acc:NP_990094]
16.2698 -12.91 0.0000370898 433 14 5 19 [+] picture button
ANXA2_CHICK ENSGALT00000039485 Annexin A2 (Annexin-2) (Annexin II) (Lipocortin II) (Calpactin I heavy chain) (Chromobindin-8) (p36) (Protein I) (Placental anticoagulant protein IV) (PAP-IV). [Source:Uniprot/SWISSPROT;Acc:P17785]
16.261 -11.1 0.0000373889 483 14 6 24 [+] picture button
APAF1 ENSGALT00000038230 Apoptotic protease-activating factor 1 (Apaf-1). [Source:Uniprot/SWISSPROT;Acc:O14727]
18.6322 -15.13 0.0000378675 264 11 5 25 [+] picture button
NP_001026626.1 ENSGALT00000007014 cell cycle progression 1 [Source:RefSeq_peptide;Acc:NP_001026626]
17.2951 -19.49 0.0000379886 609 13 3 23 [+] picture button
NP_989637.1 ENSGALT00000034278 platelet-derived growth factor alpha polypeptide [Source:RefSeq_peptide;Acc:NP_989637]
20.0039 -17.46 0.0000484823 269 13 5 40 [+] picture button
NP_001012625.1 ENSGALT00000008561 hypothetical protein LOC426797 [Source:RefSeq_peptide;Acc:NP_001012625]
17.7589 -15.6 0.0000550543 436 19 10 41 [+] picture button

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Download table: GFF TXT
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