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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Gallus gallus and gga-miR-148a

697 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SOS2 ENSGALT00000020050 Son of sevenless homolog 2 (SOS-2). [Source:Uniprot/SWISSPROT;Acc:Q07890]
18.0283 -18.31 0.00000000466656 600 17 10 34 [+] picture button
DYNLL2 ENSGALT00000008859 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
17.997 -21.09 0.00000000512357 510 14 10 27 [+] picture button
RTCD1 ENSGALT00000008464 RNA 3'-terminal phosphate cyclase (EC 6.5.1.4) (RNA-3'-phosphate cyclase) (RNA cyclase). [Source:Uniprot/SWISSPROT;Acc:O00442]
16.0248 -9.89 0.0000000485311 488 9 2 20 [+] picture button
CAND1 ENSGALT00000016099 Cullin-associated NEDD8-dissociated protein 1 (Cullin-associated and neddylation-dissociated protein 1) (p120 CAND1) (TBP-interacting protein TIP120A) (TBP-interacting protein of 120 kDa A). [Source:Uniprot/SWISSPROT;Acc:Q86VP6]
16.3214 -14.71 0.0000000809623 328 15 8 32 [+] picture button
XPO4_CHICK ENSGALT00000027676 Exportin-4. [Source:Uniprot/SWISSPROT;Acc:Q5ZMR9]
16.9214 -16.76 0.00000011362 370 15 7 34 [+] picture button
Q9I9K3_CHICK ENSGALT00000027197 Collagen IV a1 chain (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9I9K3]
16.5634 -14.23 0.000000476466 506 16 7 31 [+] picture button
SPIRE1 ENSGALT00000022477 spire homolog 1 [Source:RefSeq_peptide;Acc:NP_064533]
16.8281 -17.56 0.000000530166 277 15 3 48 [+] picture button
Q90842_CHICK ENSGALT00000013444 FAR-1 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90842]
18.3531 -17.71 0.00000099408 526 17 6 28 [+] picture button
AKAP1 ENSGALT00000008944 A kinase anchor protein 1, mitochondrial precursor (Protein kinase A- anchoring protein 1) (PRKA1) (A-kinase anchor protein 149 kDa) (AKAP 149) (Dual specificity A-kinase-anchoring protein 1) (D-AKAP-1) (Spermatid A-kinase anchor protein 84) (S-AKAP84). [Source:Uniprot/SWISSPROT;Acc:Q92667]
16.7938 -28.56 0.00000110538 600 16 8 22 [+] picture button
CRLS1 ENSGALT00000014998 Cardiolipin synthetase (EC 2.7.8.-) (Cardiolipin synthase) (CLS) (Protein GCD10 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9UJA2]
17.5551 -17.86 0.00000131853 348 13 3 31 [+] picture button
DNAJC8 ENSGALT00000001147 DnaJ homolog subfamily C member 8 (Splicing protein spf31). [Source:Uniprot/SWISSPROT;Acc:O75937]
16.653 -12.97 0.00000165319 637 15 3 26 [+] picture button
DGCR8 ENSGALT00000003227 Protein DGCR8 (DiGeorge syndrome critical region 8). [Source:Uniprot/SWISSPROT;Acc:Q8WYQ5]
16.3733 -12.49 0.00000214377 246 12 2 34 [+] picture button
ENSGALT00000024404 Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750]Transcription initiation factor TFIID subunit 4B (Transcription initiation factor TFIID 105 kDa subunit) (TAFII-105) (TAFII105). [Source:Uniprot/SWISSPROT;Acc:Q92750] BY ORTHOLOGY TO:SINFRUT00000178319
17.3966 -15.73 0.0000032337 95 5 7 23 [+] picture button
NP_001026467.1 ENSGALT00000018445 splicing factor, arginine/serine-rich 11 [Source:RefSeq_peptide;Acc:NP_001026467]
16.2369 -20.85 0.00000336051 1196 9 5 9 [+] picture button
CDK8 ENSGALT00000027628 Cell division protein kinase 8 (EC 2.7.11.22) (EC 2.7.11.23) (Protein kinase K35). [Source:Uniprot/SWISSPROT;Acc:P49336]
17.9651 -20.31 0.00000350934 167 7 8 33 [+] picture button
A4ZZA2_CHICK ENSGALT00000013472 Leucine-rich repeat neuronal 1. [Source:Uniprot/SPTREMBL;Acc:A4ZZA2]
17.0899 -17.96 0.00000367449 600 14 8 27 [+] picture button
NP_001006131.1 ENSGALT00000001163 dihydroorotate dehydrogenase [Source:RefSeq_peptide;Acc:NP_001006131]
16.1032 -16.7 0.0000058238 537 16 2 36 [+] picture button
LASS6 ENSGALT00000017733 LAG1 longevity assurance homolog 6. [Source:Uniprot/SWISSPROT;Acc:Q6ZMG9]
18.5827 -28.23 0.00000605872 600 13 5 25 [+] picture button
CEF10_CHICK ENSGALT00000014106 Protein CEF-10 precursor. [Source:Uniprot/SWISSPROT;Acc:P19336]
18.4199 -17.14 0.00000690443 293 15 6 41 [+] picture button
SCARB2 ENSGALT00000018738 Lysosome membrane protein 2 (Lysosome membrane protein II) (LIMP II) (Scavenger receptor class B member 2) (85 kDa lysosomal membrane sialoglycoprotein) (LGP85) (CD36 antigen-like 2). [Source:Uniprot/SWISSPROT;Acc:Q14108]
16.7665 -16.51 0.00000831904 530 12 2 19 [+] picture button
NP_001006171.1 ENSGALT00000010969 ADP-ribosylation factor-like 6 interacting protein [Source:RefSeq_peptide;Acc:NP_001006171]
16.0981 -18.23 0.00000928899 952 10 5 18 [+] picture button
NP_001038113.1 ENSGALT00000020211 katanin p60 (ATPase-containing) subunit A 1 [Source:RefSeq_peptide;Acc:NP_001038113]
16.2596 -18.08 0.00000930509 81 3 2 11 [+] picture button
NP_001025865.1 ENSGALT00000014582 F-box and WD-40 domain protein 5 [Source:RefSeq_peptide;Acc:NP_001025865]
18.3062 -17.53 0.00000962659 84 4 2 28 [+] picture button
LONRF3 ENSGALT00000014392 LON peptidase N-terminal domain and RING finger protein 3 (RING finger protein 127). [Source:Uniprot/SWISSPROT;Acc:Q496Y0]
16.7144 -11.41 0.0000109237 278 12 3 35 [+] picture button
STYX ENSGALT00000020280 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
16.9689 -18.07 0.0000114822 600 12 7 23 [+] picture button
EBI2 ENSGALT00000027271 EBV-induced G-protein coupled receptor 2 (EBI2). [Source:Uniprot/SWISSPROT;Acc:P32249]
17.9174 -26.38 0.0000116319 600 16 2 22 [+] picture button
YTHDC2 ENSGALT00000000247 YTH domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9H6S0]
16.3598 -13.89 0.0000124348 363 14 1 26 [+] picture button
PDIA3_CHICK ENSGALT00000013589 Protein disulfide-isomerase A3 precursor (EC 5.3.4.1) (ERp57) (Glucose regulated thiol oxidoreductase 58 kDa protein). [Source:Uniprot/SWISSPROT;Acc:Q8JG64]
16.8281 -15.12 0.0000142693 290 13 8 53 [+] picture button
ACBD6 ENSGALT00000006255 Acyl-CoA-binding domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q9BR61]
16.3733 -20.77 0.0000194799 278 14 4 45 [+] picture button
NP_001026164.1 ENSGALT00000037528 programmed cell death 6 interacting protein [Source:RefSeq_peptide;Acc:NP_001026164]
16.1642 -14.43 0.0000218864 467 14 3 25 [+] picture button
Q5F446_CHICK ENSGALT00000015466 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5F446]
17.9651 -11.44 0.0000243289 193 9 3 27 [+] picture button
NOGG_CHICK ENSGALT00000004916 Noggin precursor (cNoggin). [Source:Uniprot/SWISSPROT;Acc:O93525]
16.9034 -17.01 0.000035955 600 16 8 28 [+] picture button
DHRS13 ENSGALT00000006386 dehydrogenase/reductase (SDR family) member 13 [Source:RefSeq_peptide;Acc:NP_653284]
16.1922 -14.67 0.0000365181 600 17 2 23 [+] picture button
XR_027102.1 ENSGALT00000008101 PREDICTED: Gallus gallus similar to folylpolyglutamate synthetase (LOC417227), mRNA. [Source:RefSeq_dna;Acc:XR_027102]
17.3412 -21.79 0.0000390433 600 19 7 43 [+] picture button
SETDB1 ENSGALT00000040574 Histone-lysine N-methyltransferase SETDB1 (EC 2.1.1.43) (SET domain bifurcated 1) (ERG-associated protein with SET domain) (ESET) (Histone H3-K9 methyltransferase 4) (H3-K9-HMTase 4). [Source:Uniprot/SWISSPROT;Acc:Q15047]
19.4653 -19.64 0.0000397994 600 22 1 25 [+] picture button
C9orf19 ENSGALT00000022099 Golgi-associated plant pathogenesis-related protein 1 (Golgi- associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2). [Source:Uniprot/SWISSPROT;Acc:Q9H4G4]
18.6044 -24.51 0.0000421463 446 17 2 23 [+] picture button
NP_001029991.1 ENSGALT00000017722 bone morphogenetic protein 3 (osteogenic) [Source:RefSeq_peptide;Acc:NP_001029991]
16.2346 -14.73 0.0000457339 600 14 4 27 [+] picture button
Q5ZIZ0_CHICK ENSGALT00000004426 Hypothetical protein. [Source:Uniprot/SPTREMBL;Acc:Q5ZIZ0]
16.3733 -10.09 0.0000472442 162 10 7 30 [+] picture button
ENSGALT00000004821 NOT ANNOTATED
17.1245 -14.23 0.0000482907 345 10 1 20 [+] picture button
STAC ENSGALT00000019688 SH3 and cysteine-rich domain-containing protein (SRC homology 3 and cysteine-rich domain protein). [Source:Uniprot/SWISSPROT;Acc:Q99469]
16.2311 -15.53 0.0000485093 600 11 4 17 [+] picture button
NPAT ENSGALT00000027716 nuclear protein, ataxia-telangiectasia locus [Source:RefSeq_peptide;Acc:NP_002510]
17.7377 -18.21 0.0000502102 195 10 10 45 [+] picture button
Q9YI46_CHICK ENSGALT00000006699 Tyrosine kinase ABL (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9YI46]
16.2311 -16.04 0.0000548087 600 9 7 15 [+] picture button
NP_001026003.1 ENSGALT00000027851 cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 [Source:RefSeq_peptide;Acc:NP_001026003]
16.8133 -14.43 0.0000580758 567 12 4 24 [+] picture button
GPR180 ENSGALT00000027314 Integral membrane protein GPR180 precursor (Intimal thickness-related receptor). [Source:Uniprot/SWISSPROT;Acc:Q86V85]
16.0942 -17.88 0.000060444 448 16 1 36 [+] picture button
USP47 ENSGALT00000008932 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
16.3733 -13.72 0.0000619355 264 13 10 37 [+] picture button
EF1B_CHICK ENSGALT00000013984 Elongation factor 1-beta (EF-1-beta). [Source:Uniprot/SWISSPROT;Acc:Q9YGQ1]
17.5332 -23.74 0.0000620718 596 11 4 26 [+] picture button
RDH10 ENSGALT00000025215 retinol dehydrogenase 10 [Source:RefSeq_peptide;Acc:NP_742034]
16.8281 -16.82 0.0000669906 239 11 6 32 [+] picture button
PIGT ENSGALT00000006220 GPI transamidase component PIG-T precursor (Phosphatidylinositol- glycan biosynthesis class T protein). [Source:Uniprot/SWISSPROT;Acc:Q969N2]
16.3733 -12.27 0.0000745347 250 11 2 38 [+] picture button
SAP30BP ENSGALT00000003804 SAP30-binding protein (Transcriptional regulator protein HCNGP). [Source:Uniprot/SWISSPROT;Acc:Q9UHR5]
16.6339 -18.14 0.0000764549 462 14 2 26 [+] picture button
HEMH_CHICK ENSGALT00000029413 Ferrochelatase, mitochondrial precursor (EC 4.99.1.1) (Protoheme ferro-lyase) (Heme synthetase). [Source:Uniprot/SWISSPROT;Acc:O42479]
16.8281 -15.15 0.0000774485 285 11 2 26 [+] picture button

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Download table: GFF TXT
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