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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and xtr-miR-98

605 hits found.


Page 1 of 13
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.1759 -15.91 0.000000000000717061 400 6 3 10 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
17.0658 -17.08 0.00000000450655 400 4 3 5 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
17.1086 -15.04 0.0000000659807 400 5 4 5 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
18.8747 -16.32 0.000000194638 400 5 2 7 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.3669 -18.13 0.000000498518 400 3 7 11 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
18.146 -20.33 0.00000057765 400 4 3 5 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
17.0031 -17.76 0.000000757377 400 4 2 6 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
17.3961 -15.68 0.000000788994 400 6 3 7 [+] picture button
SINFRUT00000182939 NOT ANNOTATED
17.8365 -22.94 0.000001 400 15 1 5 [+] picture button
TTLL4 SINFRUT00000128674 Tubulin--tyrosine ligase-like protein 4. [Source:Uniprot/SWISSPROT;Acc:Q14679]
17.0752 -16.09 0.00000112173 400 5 1 6 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
17.5062 -22.15 0.00000151047 400 8 7 11 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
19.1577 -20.5 0.00000187009 400 2 4 5 [+] picture button
CPB2 SINFRUT00000145317 Carboxypeptidase B2 precursor (EC 3.4.17.20) (Carboxypeptidase U) (CPU) (Thrombin-activable fibrinolysis inhibitor) (TAFI) (Plasma carboxypeptidase B) (pCPB). [Source:Uniprot/SWISSPROT;Acc:Q96IY4]
16.6254 -13.98 0.00000326177 400 7 2 15 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
18.6072 -22.17 0.00000349045 400 9 2 12 [+] picture button
ZMYND11 SINFRUT00000162539 Zinc finger MYND domain-containing protein 11 (Adenovirus 5 E1A- binding protein) (BS69 protein). [Source:Uniprot/SWISSPROT;Acc:Q15326]
16.5153 -16.46 0.0000034975 400 5 3 8 [+] picture button
CCDC111 SINFRUT00000147927 Coiled-coil domain-containing protein 111. [Source:Uniprot/SWISSPROT;Acc:Q96LW4]
16.6254 -15.96 0.0000041223 400 6 2 9 [+] picture button
SINFRUT00000165961 Homolog of Brachydanio rerio "Cytoskeleton associated protein keap1. [Source:Uniprot/SPTREMBL;Acc:Q8JIM0]"
17.5062 -15.13 0.00000557469 400 2 3 4 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.5062 -14.58 0.0000061603 400 6 1 11 [+] picture button
SINFRUT00000173500 Homolog of Homo sapiens "Collagen alpha 2(IV) chain precursor [Source:IPI;Acc:IPI00306322]"
17.5062 -17.64 0.00000742132 400 5 4 7 [+] picture button
PYGO2 SINFRUT00000131768 Pygopus homolog 2. [Source:Uniprot/SWISSPROT;Acc:Q9BRQ0]
18.4497 -20.77 0.0000147822 400 8 3 15 [+] picture button
NUDT13 SINFRUT00000167502 Nucleoside diphosphate-linked moiety X motif 13 (EC 3.-.-.-) (Nudix motif 13) (Protein KiSS-16). [Source:Uniprot/SWISSPROT;Acc:Q86X67]
17.7264 -21.56 0.0000157989 400 10 1 9 [+] picture button
SINFRUT00000182149 Homolog of Paralichthys olivaceus "Vitamin D receptor b. [Source:Uniprot/SPTREMBL;Acc:Q9IB74]"
18.1668 -16.79 0.0000179584 400 2 3 4 [+] picture button
SLC45A4 (2 of 2) SINFRUT00000136627 solute carrier family 45, member 4 [Source:RefSeq_peptide;Acc:NP_001073900]
16.8456 -14.09 0.0000181444 400 4 3 11 [+] picture button
SLC9A6 (1 of 2) SINFRUT00000159805 Sodium/hydrogen exchanger 6 (Na(+)/H(+) exchanger 6) (NHE-6) (Solute carrier family 9 member 6). [Source:Uniprot/SWISSPROT;Acc:Q92581]
16.5153 -16.93 0.0000184108 400 8 4 11 [+] picture button
ARL14 (2 of 2) SINFRUT00000135171 ADP-ribosylation factor-like protein 14 (ADP-ribosylation factor 7). [Source:Uniprot/SWISSPROT;Acc:Q8N4G2]
18.8274 -21.51 0.0000264921 400 3 3 6 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
17.7264 -21.19 0.0000334259 400 4 1 6 [+] picture button
BEST2 SINFRUT00000151123 Bestrophin-2 (Vitelliform macular dystrophy 2-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8NFU1]
17.5062 -14.41 0.0000340856 400 4 2 7 [+] picture button
EZH1 SINFRUT00000138235 Enhancer of zeste homolog 1 (ENX-2). [Source:Uniprot/SWISSPROT;Acc:Q92800]
16.4052 -14.41 0.000036041 400 4 3 10 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.2769 -17.24 0.0000437869 400 7 2 13 [+] picture button
SINFRUT00000182968 Homolog of Xiphophorus maculatus "Four jointed box 1. [Source:Uniprot/SPTREMBL;Acc:Q5ZEQ8]"
17.6163 -19.06 0.0000446103 400 3 4 5 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
17.781 -16.96 0.0000655575 400 5 2 9 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
17.1759 -14.7 0.0000691592 400 5 2 7 [+] picture button
SAMD1 SINFRUT00000181647 Atherin (Sterile alpha motif domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6SPF0]
16.9168 -15.91 0.0000693647 400 7 4 10 [+] picture button
NR2F6 (1 of 2) SINFRUT00000157997 Orphan nuclear receptor EAR-2 (V-erbA-related protein EAR-2). [Source:Uniprot/SWISSPROT;Acc:P10588]
16.7355 -15.77 0.0000709117 400 7 4 9 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
16.9462 -15.74 0.0000805949 400 8 3 12 [+] picture button
ATPBD4 SINFRUT00000146274 ATP-binding domain protein 4. [Source:Uniprot/SWISSPROT;Acc:Q7L8W6]
16.6254 -18.56 0.0000831457 400 7 1 10 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.2386 -12.37 0.0000881586 400 5 10 10 [+] picture button
SINFRUT00000180190 Homolog of Gallus gallus "G/T mismatch DNA glycosylase. [Source:Uniprot/SPTREMBL;Acc:Q9PUA4]"
17.8365 -19.59 0.0000949952 400 5 2 8 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
16.5153 -18.07 0.0000966617 400 4 2 7 [+] picture button
WHSC1 (2 of 2) SINFRUT00000152448 Probable histone-lysine N-methyltransferase NSD2 (EC 2.1.1.43) (Nuclear SET domain-containing protein 2) (Wolf-Hirschhorn syndrome candidate 1 protein) (Multiple myeloma SET domain-containing protein) (Protein trithorax-5). [Source:Uniprot/SWISSPROT;Acc:O96028]
17.9432 -16.99 0.000142896 400 5 4 6 [+] picture button
PLA2G7 SINFRUT00000182184 Platelet-activating factor acetylhydrolase precursor (EC 3.1.1.47) (PAF acetylhydrolase) (PAF 2-acylhydrolase) (LDL-associated phospholipase A2) (LDL-PLA(2)) (2-acetyl-1-alkylglycerophosphocholine esterase) (1-alkyl-2-acetylglycerophosphocholine esterase) [Source:Uniprot/SWISSPROT;Acc:Q13093]
17.1778 -18.78 0.000146952 400 7 2 9 [+] picture button
SINFRUT00000135099 Transcribed locus, weakly similar to XP_316821.1 Anopheles gambiae str. PEST ENSANGG00000007821 gene [Source:UniGene;Acc:Tru.1531]
17.0658 -15.17 0.000147337 400 4 3 5 [+] picture button
VGLL1 SINFRUT00000145641 Transcription cofactor vestigial-like protein 1 (Vgl-1) (Protein TONDU). [Source:Uniprot/SWISSPROT;Acc:Q99990]
16.4052 -18.08 0.000158472 400 3 1 5 [+] picture button
ZFP36L1 SINFRUT00000162581 Butyrate response factor 1 (TIS11B protein) (EGF-response factor 1) (ERF-1). [Source:Uniprot/SWISSPROT;Acc:Q07352]
16.9172 -17.08 0.0001963 400 7 2 15 [+] picture button
HOMER1 (1 of 2) SINFRUT00000170540 Homer protein homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q86YM7]
17.8011 -17.14 0.000198113 400 5 4 7 [+] picture button
CASQ1 (2 of 2) SINFRUT00000137941 Calsequestrin-1 precursor (Calsequestrin, skeletal muscle isoform) (Calmitin). [Source:Uniprot/SWISSPROT;Acc:P31415]
18.9905 -18.27 0.000215093 400 6 2 7 [+] picture button
STAC2 (2 of 2) SINFRUT00000157658 SH3 and cysteine-rich domain-containing protein 2 (SRC homology 3 and cysteine-rich domain protein 2) (24b2/STAC2). [Source:Uniprot/SWISSPROT;Acc:Q6ZMT1]
18.6072 -20.39 0.000224797 400 6 3 7 [+] picture button
Q5T253_HUMAN SINFRUT00000134990 OTTHUMP00000017000 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T253]
17.3961 -16.6 0.000234757 400 3 2 8 [+] picture button
SLC27A4 SINFRUT00000151747 Long-chain fatty acid transport protein 4 (EC 6.2.1.-) (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4). [Source:Uniprot/SWISSPROT;Acc:Q6P1M0]
19.0163 -20.41 0.000237234 400 4 4 4 [+] picture button
LRRC62 (2 of 2) SINFRUT00000172390 Leucine-rich repeat and fibronectin type-III domain-containing protein 6 precursor (Leucine-rich repeat-containing protein 62). [Source:Uniprot/SWISSPROT;Acc:Q5R3F8]
17.9466 -19.04 0.000260077 400 7 4 13 [+] picture button

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Download table: GFF TXT
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