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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and xtr-miR-33b

807 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBWD5 SINFRUT00000170943 COBW domain-containing protein 5. [Source:Uniprot/SPTREMBL;Acc:Q5RIA9]
16.3756 -17.74 0.000000733628 400 7 2 7 [+] picture button
SINFRUT00000182939 NOT ANNOTATED
16.6743 -12.39 0.000001 400 15 1 5 [+] picture button
ABCA1 (1 of 3) SINFRUT00000157349 ATP-binding cassette sub-family A member 1 (ATP-binding cassette transporter 1) (ATP-binding cassette 1) (ABC-1) (Cholesterol efflux regulatory protein). [Source:Uniprot/SWISSPROT;Acc:O95477]
19.0866 -20.42 0.00000217984 400 3 4 7 [+] picture button
KIAA1609 SINFRUT00000145602 KIAA1609 (KIAA1609), mRNA [Source:RefSeq_dna;Acc:NM_020947]
19.9196 -23.21 0.00000238095 400 9 1 11 [+] picture button
TMEM1 SINFRUT00000135785 Transmembrane protein 1 (Epilepsy holoprosencephaly candidate 1 protein) (EHOC-1) (GT334 protein). [Source:Uniprot/SWISSPROT;Acc:P48553]
16.5406 -12.5 0.00000324023 400 2 2 4 [+] picture button
DNAJC12 SINFRUT00000142175 DnaJ homolog subfamily C member 12 (J domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKB3]
16.6743 -14.78 0.00000347098 400 6 2 8 [+] picture button
KCNJ12 (1 of 2) SINFRUT00000141649 ATP-sensitive inward rectifier potassium channel 12 (Potassium channel, inwardly rectifying subfamily J member 12) (Inward rectifier K(+) channel Kir2.2) (Kir2.2v) (IRK2). [Source:Uniprot/SWISSPROT;Acc:Q14500]
19.1342 -19.69 0.00000574349 400 5 5 5 [+] picture button
NUP35 SINFRUT00000158211 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin) (Mitotic phosphoprotein 44) (MP-44). [Source:Uniprot/SWISSPROT;Acc:Q8NFH5]
18.3087 -18.25 0.00000718441 400 7 3 9 [+] picture button
ICT1 SINFRUT00000148898 Immature colon carcinoma transcript 1 protein precursor (Digestion substraction 1) (DS-1). [Source:Uniprot/SWISSPROT;Acc:Q14197]
16.6743 -13.48 0.00000911318 400 3 1 4 [+] picture button
DEPDC6 SINFRUT00000153668 DEP domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q8TB45]
17.01 -15.45 0.0000094881 400 4 3 6 [+] picture button
CACNA1D (1 of 2) SINFRUT00000178889 Voltage-dependent L-type calcium channel subunit alpha-1D (Voltage- gated calcium channel subunit alpha Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2). [Source:Uniprot/SWISSPROT;Acc:Q01668]
16.6743 -14.69 0.0000102912 400 5 5 6 [+] picture button
CNTN5 SINFRUT00000151387 Contactin-5 precursor (Neural recognition molecule NB-2) (hNB-2). [Source:Uniprot/SWISSPROT;Acc:O94779]
16.4505 -11.83 0.0000133632 400 4 1 5 [+] picture button
CGAT2_HUMAN SINFRUT00000131162 Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2 (EC 2.4.1.174) (GalNAcT-2) (beta4GalNAcT-2). [Source:Uniprot/SWISSPROT;Acc:Q8N6G5]
16.4505 -11.88 0.0000137951 400 9 3 10 [+] picture button
SINFRUT00000166856 Homolog of Ictalurus punctatus "Delayed rectifier potassium channel Kv2. [Source:Uniprot/SPTREMBL;Acc:Q98SV4]"
19.5839 -21.35 0.0000147962 400 4 3 5 [+] picture button
DGCR8 SINFRUT00000163485 Protein DGCR8 (DiGeorge syndrome critical region 8). [Source:Uniprot/SWISSPROT;Acc:Q8WYQ5]
17.4577 -16.94 0.0000182969 400 5 4 9 [+] picture button
FABP2 (2 of 2) SINFRUT00000149155 Fatty acid-binding protein, intestinal (I-FABP) (FABPI). [Source:Uniprot/SWISSPROT;Acc:P12104]
17.3592 -11.52 0.0000275175 400 5 2 8 [+] picture button
NP_001006948.1 SINFRUT00000181995 RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888]RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888] BY ORTHOLOGY TO:ENSMUST00000020112
17.01 -13.99 0.0000286427 400 5 3 7 [+] picture button
FAM5C (1 of 3) SINFRUT00000128431 Protein FAM5C precursor (DBCCR1-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q76B58]
17.5696 -20 0.0000333727 400 5 3 9 [+] picture button
SINFRUT00000148776 Homolog of Gallus gallus "G/T mismatch DNA glycosylase. [Source:Uniprot/SPTREMBL;Acc:Q9PUA4]"
16.404 -10.18 0.0000387224 400 4 1 4 [+] picture button
ESRRB SINFRUT00000177221 Steroid hormone receptor ERR2 (Estrogen-related receptor, beta) (ERR- beta) (Estrogen receptor-like 2) (ERR beta-2). [Source:Uniprot/SWISSPROT;Acc:O95718]
16.5308 -7.78 0.0000429082 400 3 3 3 [+] picture button
SINFRUT00000140504 Homolog of Homo sapiens "PREDICTED "similar to RIKEN cDNA B230396O12 [Source:IPI;Acc:IPI00376181]"
19.2482 -23.2 0.0000499603 400 5 2 3 [+] picture button
SMPDL3B SINFRUT00000150795 Acid sphingomyelinase-like phosphodiesterase 3b precursor (EC 3.1.4.-) (ASM-like phosphodiesterase 3b). [Source:Uniprot/SWISSPROT;Acc:Q92485]
16.3386 -12.29 0.0000568256 400 7 3 10 [+] picture button
OXR1 SINFRUT00000131961 Oxidation resistance protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8N573]
16.4878 -15.93 0.0000578572 400 6 4 8 [+] picture button
RALGPS1 SINFRUT00000145278 Ral GEF with PH domain and SH3 binding motif 1 [Source:RefSeq_peptide;Acc:NP_055451]
16.4505 -16.55 0.000058526 400 5 1 5 [+] picture button
CHID1 SINFRUT00000130491 Chitinase domain-containing protein 1 precursor (Stabilin-1- interacting chitinase-like protein) (SI-CLP). [Source:Uniprot/SWISSPROT;Acc:Q9BWS9]
17.1219 -18.62 0.000059109 400 4 2 6 [+] picture button
C7orf48 SINFRUT00000142387 Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73]
17.5696 -18.86 0.0000610029 400 8 2 10 [+] picture button
WRNIP1 SINFRUT00000127060 ATPase WRNIP1 (Werner helicase-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96S55]
16.3386 -10.71 0.000064526 400 4 1 5 [+] picture button
SINFRUT00000180662 NOT ANNOTATED
17.3458 -15.96 0.0000701159 400 4 1 3 [+] picture button
SINFRUT00000160811 Homolog of Homo sapiens "Splice Isoform 2 of ADAM 9 precursor [Source:IPI;Acc:IPI00440933]"
16.663 -16.15 0.0000706787 400 4 2 4 [+] picture button
INTS10 SINFRUT00000165975 Integrator complex subunit 10 (Int10). [Source:Uniprot/SWISSPROT;Acc:Q9NVR2]
16.5163 -12.29 0.0000738444 400 5 2 10 [+] picture button
ARFGAP3 SINFRUT00000160700 ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3). [Source:Uniprot/SWISSPROT;Acc:Q9NP61]
16.7862 -14.75 0.0000742879 400 6 2 7 [+] picture button
CHFR SINFRUT00000158754 E3 ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint with forkhead and RING finger domains protein) (RING finger protein 196). [Source:Uniprot/SWISSPROT;Acc:Q96EP1]
16.2267 -15.72 0.0000742906 400 6 3 5 [+] picture button
CASP2 SINFRUT00000130550 Caspase-2 precursor (EC 3.4.22.55) (CASP-2) (ICH-1 protease) (ICH- 1L/1S) [Contains: Caspase-2 subunit p18; Caspase-2 subunit p13; Caspase-2 subunit p12]. [Source:Uniprot/SWISSPROT;Acc:P42575]
16.5624 -17.75 0.0000771942 400 8 1 7 [+] picture button
METTL9 SINFRUT00000136042 methyltransferase like 9 isoform 1 [Source:RefSeq_peptide;Acc:NP_057109]
19.3601 -18.07 0.0000772524 400 6 1 9 [+] picture button
TYR (2 of 2) SINFRUT00000147384 Tyrosinase precursor (EC 1.14.18.1) (Monophenol monooxygenase) (Tumor rejection antigen AB) (SK29-AB) (LB24-AB). [Source:Uniprot/SWISSPROT;Acc:P14679]
16.2979 -14.06 0.0000854533 400 5 2 6 [+] picture button
DYNLL2 SINFRUT00000183595 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
17.318 -14.59 0.000087983 400 4 10 4 [+] picture button
C1orf102 SINFRUT00000136769 Protein OSCP1 (Organic solute transport protein 1) (hOSCP1) (Oxidored- nitro domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8WVF1]
18.241 -18.76 0.0000931883 400 3 2 4 [+] picture button
DTL SINFRUT00000133632 Denticleless protein homolog (Lethal(2) denticleless protein homolog) (Ddb1- and Cul4-associated factor 2) (Retinoic-acid regulated nuclear matrix-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q9NZJ0]
17.7934 -13.76 0.000100753 400 4 2 5 [+] picture button
C12orf48 SINFRUT00000149514 UPF0419 protein C12orf48. [Source:Uniprot/SWISSPROT;Acc:Q9NWS1]
17.3458 -13.41 0.000111656 400 8 2 16 [+] picture button
SLC20A1 (1 of 2) SINFRUT00000136265 Sodium-dependent phosphate transporter 1 (Solute carrier family 20 member 1) (Phosphate transporter 1) (PiT-1) (Gibbon ape leukemia virus receptor 1) (GLVR-1) (Leukemia virus receptor 1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q8WUM9]
16.8981 -16.74 0.000122834 400 9 2 12 [+] picture button
ASB3 SINFRUT00000163596 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
17.6815 -18.77 0.000145375 400 6 2 7 [+] picture button
AK5 SINFRUT00000172689 Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP transphosphorylase). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K8]
16.3756 -17.3 0.00014591 400 5 2 6 [+] picture button
TRIM32 SINFRUT00000147168 Tripartite motif-containing protein 32 (EC 6.3.2.-) (Zinc finger protein HT2A) (72 kDa Tat-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q13049]
17.4285 -17.55 0.000147342 400 5 2 5 [+] picture button
NRBF2 SINFRUT00000137304 Nuclear receptor-binding factor 2 (NRBF-2) (Comodulator of PPAR and RXR). [Source:Uniprot/SWISSPROT;Acc:Q96F24]
16.4505 -10.47 0.000182945 400 5 1 11 [+] picture button
FBXO33 SINFRUT00000158478 F-box only protein 33. [Source:Uniprot/SWISSPROT;Acc:Q7Z6M2]
16.3386 -9.4 0.000184148 400 6 4 8 [+] picture button
SINFRUT00000136170 Homolog of Homo sapiens "TAFA5 [Source:IPI;Acc:IPI00385234]"
18.0684 -19.39 0.000199466 400 2 2 2 [+] picture button
RABEPK SINFRUT00000127088 Rab9 effector protein with Kelch motifs (40 kDa Rab9 effector protein) (p40). [Source:Uniprot/SWISSPROT;Acc:Q7Z6M1]
17.5696 -12.2 0.000211003 400 9 2 10 [+] picture button
TNFAIP3 SINFRUT00000156362 Tumor necrosis factor, alpha-induced protein 3 (EC 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20). [Source:Uniprot/SWISSPROT;Acc:P21580]
17.5297 -16.24 0.000229717 400 5 4 7 [+] picture button
SINFRUT00000135593 Homolog of Homo sapiens "CAMP-dependent protein kinase CatalytiC subunit alpha isoform 1 [Source:IPI;Acc:IPI00396630]"
17.9562 -15.4 0.000243443 400 4 4 6 [+] picture button
USPL1 SINFRUT00000178359 Ubiquitin-specific peptidase-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5W0Q7]
16.7862 -12.25 0.000247175 400 5 2 7 [+] picture button

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Download table: GFF TXT
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