spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and xtr-miR-33a

781 hits found.


Page 1 of 16
1 2 3 4 5 6 7 8 9 10 11 .. 16 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
SINFRUT00000182939 NOT ANNOTATED
17.5696 -17.5 1e-06 400 15 1 5 [+] picture button
ABCA1 (1 of 3) SINFRUT00000157349 ATP-binding cassette sub-family A member 1 (ATP-binding cassette transporter 1) (ATP-binding cassette 1) (ABC-1) (Cholesterol efflux regulatory protein). [Source:Uniprot/SWISSPROT;Acc:O95477]
19.0866 -20.42 2.17984e-06 400 3 4 7 [+] picture button
KIAA1609 SINFRUT00000145602 KIAA1609 (KIAA1609), mRNA [Source:RefSeq_dna;Acc:NM_020947]
19.0244 -19.96 2.38095e-06 400 9 1 11 [+] picture button
DNAJC12 SINFRUT00000142175 DnaJ homolog subfamily C member 12 (J domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKB3]
16.6743 -14.78 3.47098e-06 400 6 2 8 [+] picture button
PLCL1 SINFRUT00000143870 phospholipase C-like 1 [Source:RefSeq_peptide;Acc:NP_006217]
16.7722 -17.83 4.6822e-06 400 7 2 7 [+] picture button
GABRP SINFRUT00000157517 Gamma-aminobutyric-acid receptor subunit pi precursor (GABA(A) receptor subunit pi). [Source:Uniprot/SWISSPROT;Acc:O00591]
16.5624 -20.25 4.89009e-06 400 8 4 9 [+] picture button
KCNJ12 (1 of 2) SINFRUT00000141649 ATP-sensitive inward rectifier potassium channel 12 (Potassium channel, inwardly rectifying subfamily J member 12) (Inward rectifier K(+) channel Kir2.2) (Kir2.2v) (IRK2). [Source:Uniprot/SWISSPROT;Acc:Q14500]
18.2338 -19.53 5.74349e-06 400 5 5 5 [+] picture button
NUP35 SINFRUT00000158211 Nucleoporin NUP53 (Nuclear pore complex protein Nup53) (Nucleoporin Nup35) (35 kDa nucleoporin) (Mitotic phosphoprotein 44) (MP-44). [Source:Uniprot/SWISSPROT;Acc:Q8NFH5]
17.4101 -15.88 7.18441e-06 400 7 3 9 [+] picture button
ICT1 SINFRUT00000148898 Immature colon carcinoma transcript 1 protein precursor (Digestion substraction 1) (DS-1). [Source:Uniprot/SWISSPROT;Acc:Q14197]
17.01 -14.04 9.11318e-06 400 3 1 4 [+] picture button
DEPDC6 SINFRUT00000153668 DEP domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q8TB45]
17.01 -14.22 9.4881e-06 400 4 3 6 [+] picture button
CACNA1D (1 of 2) SINFRUT00000178889 Voltage-dependent L-type calcium channel subunit alpha-1D (Voltage- gated calcium channel subunit alpha Cav1.3) (Calcium channel, L type, alpha-1 polypeptide, isoform 2). [Source:Uniprot/SWISSPROT;Acc:Q01668]
17.5696 -16.21 1.02912e-05 400 5 5 6 [+] picture button
Q6ZSY1_HUMAN (3 of 3) SINFRUT00000150670 CDNA FLJ45135 fis, clone BRAWH3038252, highly similar to Formin 1 isoform IV. [Source:Uniprot/SPTREMBL;Acc:Q6ZSY1]
16.5624 -13.26 1.15604e-05 400 6 2 8 [+] picture button
CNTN5 SINFRUT00000151387 Contactin-5 precursor (Neural recognition molecule NB-2) (hNB-2). [Source:Uniprot/SWISSPROT;Acc:O94779]
16.4505 -11.72 1.33632e-05 400 4 1 5 [+] picture button
CGAT2_HUMAN SINFRUT00000131162 Chondroitin beta-1,4-N-acetylgalactosaminyltransferase 2 (EC 2.4.1.174) (GalNAcT-2) (beta4GalNAcT-2). [Source:Uniprot/SWISSPROT;Acc:Q8N6G5]
16.7862 -13.48 1.37951e-05 400 9 3 10 [+] picture button
SINFRUT00000166856 Homolog of Ictalurus punctatus "Delayed rectifier potassium channel Kv2. [Source:Uniprot/SPTREMBL;Acc:Q98SV4]"
19.0244 -19.98 1.47962e-05 400 4 3 5 [+] picture button
DGCR8 SINFRUT00000163485 Protein DGCR8 (DiGeorge syndrome critical region 8). [Source:Uniprot/SWISSPROT;Acc:Q8WYQ5]
17.4577 -16.94 1.82969e-05 400 5 4 9 [+] picture button
FABP2 (2 of 2) SINFRUT00000149155 Fatty acid-binding protein, intestinal (I-FABP) (FABPI). [Source:Uniprot/SWISSPROT;Acc:P12104]
16.7956 -11.51 2.75175e-05 400 5 2 8 [+] picture button
NP_001006948.1 SINFRUT00000181995 RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888]RIKEN cDNA E030041M21 gene [Source:MarkerSymbol;Acc:MGI:2442888] BY ORTHOLOGY TO:ENSMUST00000020112
17.3458 -14.18 2.86427e-05 400 5 3 7 [+] picture button
DLD SINFRUT00000177681 Dihydrolipoyl dehydrogenase, mitochondrial precursor (EC 1.8.1.4) (Dihydrolipoamide dehydrogenase) (Glycine cleavage system L protein). [Source:Uniprot/SWISSPROT;Acc:P09622]
16.6743 -17.7 3.09931e-05 400 5 2 6 [+] picture button
FAM5C (1 of 3) SINFRUT00000128431 Protein FAM5C precursor (DBCCR1-like protein 1). [Source:Uniprot/SWISSPROT;Acc:Q76B58]
17.01 -17.18 3.33727e-05 400 5 3 9 [+] picture button
STXBP5L SINFRUT00000178408 Syntaxin-binding protein 5-like (Tomosyn-2) (Lethal(2) giant larvae protein homolog 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y2K9]
16.4505 -16.85 3.76635e-05 400 4 3 5 [+] picture button
SINFRUT00000148776 Homolog of Gallus gallus "G/T mismatch DNA glycosylase. [Source:Uniprot/SPTREMBL;Acc:Q9PUA4]"
16.404 -10.19 3.87224e-05 400 4 1 4 [+] picture button
SINFRUT00000140504 Homolog of Homo sapiens "PREDICTED "similar to RIKEN cDNA B230396O12 [Source:IPI;Acc:IPI00376181]"
18.3529 -18.7 4.99603e-05 400 5 2 3 [+] picture button
THOC4 SINFRUT00000171958 THO complex subunit 4 (Tho4) (Ally of AML-1 and LEF-1) (Transcriptional coactivator Aly/REF) (bZIP-enhancing factor BEF). [Source:Uniprot/SWISSPROT;Acc:Q86V81]
17.1269 -16 5.54567e-05 400 7 4 11 [+] picture button
CHID1 SINFRUT00000130491 Chitinase domain-containing protein 1 precursor (Stabilin-1- interacting chitinase-like protein) (SI-CLP). [Source:Uniprot/SWISSPROT;Acc:Q9BWS9]
16.2267 -15.15 5.9109e-05 400 4 2 6 [+] picture button
C7orf48 SINFRUT00000142387 Uncharacterized protein C7orf48. [Source:Uniprot/SWISSPROT;Acc:Q9BT73]
16.6743 -15.85 6.10029e-05 400 8 2 10 [+] picture button
WRNIP1 SINFRUT00000127060 ATPase WRNIP1 (Werner helicase-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96S55]
17.2338 -15.2 6.4526e-05 400 4 1 5 [+] picture button
SINFRUT00000180662 NOT ANNOTATED
17.01 -15.37 7.01159e-05 400 4 1 3 [+] picture button
ARFGAP3 SINFRUT00000160700 ADP-ribosylation factor GTPase-activating protein 3 (ARF GAP 3). [Source:Uniprot/SWISSPROT;Acc:Q9NP61]
17.6815 -18.73 7.42879e-05 400 6 2 7 [+] picture button
CHFR SINFRUT00000158754 E3 ubiquitin-protein ligase CHFR (EC 6.3.2.-) (Checkpoint with forkhead and RING finger domains protein) (RING finger protein 196). [Source:Uniprot/SWISSPROT;Acc:Q96EP1]
16.5624 -14.7 7.42906e-05 400 6 3 5 [+] picture button
METTL9 SINFRUT00000136042 methyltransferase like 9 isoform 1 [Source:RefSeq_peptide;Acc:NP_057109]
20.2554 -21.41 7.72524e-05 400 6 1 9 [+] picture button
TYR (2 of 2) SINFRUT00000147384 Tyrosinase precursor (EC 1.14.18.1) (Monophenol monooxygenase) (Tumor rejection antigen AB) (SK29-AB) (LB24-AB). [Source:Uniprot/SWISSPROT;Acc:P14679]
16.2979 -14.87 8.54533e-05 400 5 2 6 [+] picture button
DYNLL2 SINFRUT00000183595 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
16.4184 -11.73 8.7983e-05 400 4 10 4 [+] picture button
C1orf102 SINFRUT00000136769 Protein OSCP1 (Organic solute transport protein 1) (hOSCP1) (Oxidored- nitro domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8WVF1]
18.241 -18.76 9.31883e-05 400 3 2 4 [+] picture button
DTL SINFRUT00000133632 Denticleless protein homolog (Lethal(2) denticleless protein homolog) (Ddb1- and Cul4-associated factor 2) (Retinoic-acid regulated nuclear matrix-associated protein). [Source:Uniprot/SWISSPROT;Acc:Q9NZJ0]
17.7934 -14.06 0.000100753 400 4 2 5 [+] picture button
DLGAP4 (2 of 2) SINFRUT00000182234 Disks large-associated protein 4 (DAP-4) (SAP90/PSD-95-associated protein 4) (SAPAP4) (PSD-95/SAP90-binding protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y2H0]
16.8981 -15.86 0.000105526 400 7 4 14 [+] picture button
C12orf48 SINFRUT00000149514 UPF0419 protein C12orf48. [Source:Uniprot/SWISSPROT;Acc:Q9NWS1]
17.3458 -13.41 0.000111656 400 8 2 16 [+] picture button
ASB3 SINFRUT00000163596 Ankyrin repeat and SOCS box protein 3 (ASB-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y575]
17.1219 -15.68 0.000145375 400 6 2 7 [+] picture button
AK5 SINFRUT00000172689 Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP transphosphorylase). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K8]
16.7121 -14.96 0.00014591 400 5 2 6 [+] picture button
TRIM32 SINFRUT00000147168 Tripartite motif-containing protein 32 (EC 6.3.2.-) (Zinc finger protein HT2A) (72 kDa Tat-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q13049]
16.8627 -15.36 0.000147342 400 5 2 5 [+] picture button
SAP30L SINFRUT00000131762 Sin3A associated protein p30-like [Source:RefSeq_peptide;Acc:NP_078908]
16.5129 -15.82 0.000154991 400 5 10 6 [+] picture button
FAM19A4 (2 of 2) SINFRUT00000181554 Protein FAM19A4 precursor (Chemokine-like protein TAFA-4). [Source:Uniprot/SWISSPROT;Acc:Q96LR4]
16.2267 -11.61 0.000168345 400 2 3 2 [+] picture button
PLN SINFRUT00000131404 Cardiac phospholamban (PLB). [Source:Uniprot/SWISSPROT;Acc:P26678]
16.8007 -11.3 0.000171309 400 2 1 3 [+] picture button
SINFRUT00000136170 Homolog of Homo sapiens "TAFA5 [Source:IPI;Acc:IPI00385234]"
17.1706 -16.61 0.000199466 400 2 2 2 [+] picture button
RABEPK SINFRUT00000127088 Rab9 effector protein with Kelch motifs (40 kDa Rab9 effector protein) (p40). [Source:Uniprot/SWISSPROT;Acc:Q7Z6M1]
16.6743 -9.85 0.000211003 400 9 2 10 [+] picture button
TNFAIP3 SINFRUT00000156362 Tumor necrosis factor, alpha-induced protein 3 (EC 3.-.-.-) (Putative DNA-binding protein A20) (Zinc finger protein A20). [Source:Uniprot/SWISSPROT;Acc:P21580]
17.8712 -15.4 0.000229717 400 5 4 7 [+] picture button
SINFRUT00000135593 Homolog of Homo sapiens "CAMP-dependent protein kinase CatalytiC subunit alpha isoform 1 [Source:IPI;Acc:IPI00396630]"
17.0584 -14.56 0.000243443 400 4 4 6 [+] picture button
WDR42A SINFRUT00000178498 H326 [Source:RefSeq_peptide;Acc:NP_056541]
16.2072 -10.73 0.000259389 400 6 2 7 [+] picture button
LINGO2 SINFRUT00000154486 leucine rich repeat neuronal 6C [Source:RefSeq_peptide;Acc:NP_689783]
16.6743 -13.36 0.000260166 400 5 4 8 [+] picture button
BTBD11 (1 of 2) SINFRUT00000135200 BTB (POZ) domain containing 11 isoform 3 [Source:RefSeq_peptide;Acc:NP_001018082]
16.7805 -14.91 0.000285211 400 5 1 8 [+] picture button

Page 1 of 16
1 2 3 4 5 6 7 8 9 10 11 .. 16 next >>

Download table: GFF TXT
spacer
spacer