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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-96

797 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SH3KBP1 SINFRUT00000143559 SH3 domain-containing kinase-binding protein 1 (Cbl-interacting protein of 85 kDa) (Human Src-family kinase-binding protein 1) (HSB-1) (CD2-binding protein 3) (CD2BP3). [Source:Uniprot/SWISSPROT;Acc:Q96B97]
17.5305 -15.38 1.12506e-11 400 2 10 2 [+] picture button
C6orf213 SINFRUT00000157531 Uncharacterized protein C6orf213. [Source:Uniprot/SPTREMBL;Acc:Q5SYC1]
16.654 -14.2 1.01539e-09 400 3 11 4 [+] picture button
Q98SK4_FUGRU SINFRUT00000166489 ST7 protein. [Source:Uniprot/SPTREMBL;Acc:Q98SK4]
16.4203 -13.74 8.05988e-09 400 6 11 7 [+] picture button
MAB21L2 SINFRUT00000129836 mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430]
17.9497 -20.86 8.68223e-09 400 6 6 10 [+] picture button
GULP1 SINFRUT00000145571 GULP, engulfment adaptor PTB domain containing 1 [Source:RefSeq_peptide;Acc:NP_057399]
17.3114 -15.32 9.5285e-09 400 6 7 9 [+] picture button
FOXK2 SINFRUT00000146125 Forkhead box protein K2 (Interleukin enhancer-binding factor 1) (Cellular transcription factor ILF-1) (FOXK1). [Source:Uniprot/SWISSPROT;Acc:Q01167]
16.4713 -14.93 1.76761e-08 400 7 2 7 [+] picture button
Q5T4T1_HUMAN SINFRUT00000152406 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q5T4T1]
17.64 -19.79 2.45694e-08 400 4 2 3 [+] picture button
KLHL34 SINFRUT00000143590 Kelch-like protein 34. [Source:Uniprot/SWISSPROT;Acc:Q8N239]
17.3114 -18.86 1.06013e-07 400 9 2 13 [+] picture button
GAD2 SINFRUT00000129597 Glutamate decarboxylase 2 (EC 4.1.1.15) (Glutamate decarboxylase 65 kDa isoform) (GAD-65) (65 kDa glutamic acid decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q05329]
17.8448 -22.82 2.03943e-07 400 4 3 8 [+] picture button
NP_689587.1 SINFRUT00000179033 CDNA FLJ39147 fis, clone OCBBF2000523. [Source:Uniprot/SPTREMBL;Acc:Q8N8N6]
16.9827 -17.09 3.25657e-07 400 4 1 8 [+] picture button
ZFP36L1 SINFRUT00000162581 Butyrate response factor 1 (TIS11B protein) (EGF-response factor 1) (ERF-1). [Source:Uniprot/SWISSPROT;Acc:Q07352]
18.1711 -19.1 5.87154e-07 400 7 2 15 [+] picture button
MYOCD SINFRUT00000157641 Myocardin. [Source:Uniprot/SWISSPROT;Acc:Q8IZQ8]
16.1061 -16.08 6.29628e-07 400 5 2 6 [+] picture button
EXOC5 SINFRUT00000152759 Exocyst complex component 5 (Exocyst complex component Sec10) (hSec10). [Source:Uniprot/SWISSPROT;Acc:O00471]
17.5042 -15.73 1.6556e-06 400 7 3 7 [+] picture button
WIPI2 SINFRUT00000163581 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2) (WIPI49-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y4P8]
17.2395 -12.35 1.84792e-06 400 5 9 10 [+] picture button
SLC1A1 SINFRUT00000139924 Excitatory amino acid transporter 3 (Solute carrier family 1 member 1) (Sodium-dependent glutamate/aspartate transporter 3) (Excitatory amino-acid carrier 1) (Neuronal and epithelial glutamate transporter). [Source:Uniprot/SWISSPROT;Acc:P43005]
15.887 -15.34 1.98446e-06 400 4 1 4 [+] picture button
AHCYL1 (1 of 2) SINFRUT00000136848 Putative adenosylhomocysteinase 2 (EC 3.3.1.1) (S-adenosyl-L- homocysteine hydrolase 2) (AdoHcyase 2) (S-adenosylhomocysteine hydrolase-like 1) (DC-expressed AHCY-like molecule). [Source:Uniprot/SWISSPROT;Acc:O43865]
17.5305 -13.6 2.15126e-06 400 3 4 5 [+] picture button
LHFPL2 SINFRUT00000137749 Lipoma HMGIC fusion partner-like 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q6ZUX7]
19.6557 -15.97 2.17651e-06 400 5 3 7 [+] picture button
CNR1A_FUGRU SINFRUT00000143922 Cannabinoid receptor type 1A. [Source:Uniprot/SWISSPROT;Acc:Q98894]
18.5577 -22.71 2.58351e-06 400 7 4 10 [+] picture button
LCOR SINFRUT00000148866 Ligand-dependent corepressor (LCoR) (Mblk1-related protein 2). [Source:Uniprot/SWISSPROT;Acc:Q96JN0]
17.8592 -14.74 2.85611e-06 400 5 3 7 [+] picture button
NP_056129.1 SINFRUT00000139041 PREDICTED: Bos taurus hypothetical LOC527805 (LOC527805), partial mRNA. [Source:RefSeq_dna;Acc:XR_027993]PREDICTED: Bos taurus hypothetical LOC527805 (LOC527805), partial mRNA. [Source:RefSeq_dna;Acc:XR_027993] BY ORTHOLOGY TO:ENSBTAT00000002605
15.9966 -15.83 3.23003e-06 400 6 1 8 [+] picture button
ASB6 SINFRUT00000165561 Ankyrin repeat and SOCS box protein 6 (ASB-6). [Source:Uniprot/SWISSPROT;Acc:Q9NWX5]
17.7867 -20.68 3.24696e-06 400 5 2 12 [+] picture button
GRID1 (1 of 2) SINFRUT00000130630 Glutamate receptor delta-1 subunit precursor (GluR delta-1). [Source:Uniprot/SWISSPROT;Acc:Q9ULK0]
17.4209 -23.9 3.31855e-06 400 5 9 5 [+] picture button
BAI3 SINFRUT00000129349 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
16.0582 -12.01 4.23388e-06 400 6 10 13 [+] picture button
LRRC7 SINFRUT00000128751 Leucine-rich repeat-containing protein 7 (Protein LAP1) (Densin-180). [Source:Uniprot/SWISSPROT;Acc:Q96NW7]
16.7325 -17.22 4.33771e-06 400 7 8 8 [+] picture button
RNF183 (1 of 2) SINFRUT00000179069 RING finger protein 183. [Source:Uniprot/SWISSPROT;Acc:Q96D59]
16.8731 -19.89 5.60927e-06 400 5 2 5 [+] picture button
SBK1 SINFRUT00000148732 Serine/threonine-protein kinase SBK1 (EC 2.7.11.1) (SH3-binding kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q52WX2]
16.654 -17.43 5.90515e-06 400 4 4 6 [+] picture button
SMEK1 SINFRUT00000152830 SMEK homolog 1. [Source:Uniprot/SWISSPROT;Acc:Q6IN85]
16.4128 -13.73 7.10676e-06 400 8 4 8 [+] picture button
SCYL3 SINFRUT00000130019 Protein-associating with the carboxyl-terminal domain of ezrin (Ezrin- binding protein PACE-1) (SCY1-like protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8IZE3]
15.8348 -11.32 7.13827e-06 400 5 1 6 [+] picture button
PTPRM SINFRUT00000161208 Receptor-type tyrosine-protein phosphatase mu precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase mu) (R-PTP-mu). [Source:Uniprot/SWISSPROT;Acc:P28827]
16.5444 -16.58 7.53682e-06 400 5 2 9 [+] picture button
TM6SF1 SINFRUT00000161949 Transmembrane 6 superfamily member 1. [Source:Uniprot/SWISSPROT;Acc:Q9BZW5]
15.9181 -17.66 8.13084e-06 400 5 3 6 [+] picture button
KIAA2022 SINFRUT00000152396 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
16.0411 -14.81 8.96622e-06 400 5 7 7 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
16.1555 -15.74 8.99391e-06 400 5 2 9 [+] picture button
CACNA2D2 SINFRUT00000159231 calcium channel, voltage-dependent, alpha 2/delta subunit 2 isoform b [Source:RefSeq_peptide;Acc:NP_006021]
16.654 -16.97 1.0861e-05 400 5 2 8 [+] picture button
VIL2 (1 of 2) SINFRUT00000157921 Ezrin (p81) (Cytovillin) (Villin-2). [Source:Uniprot/SWISSPROT;Acc:P15311]
18.9851 -21.23 1.20323e-05 400 5 4 7 [+] picture button
NP_001027895.1 SINFRUT00000133644 solute carrier family 30 (zinc transporter), member 1 [Source:RefSeq_peptide;Acc:NP_001027895]
17.1495 -14.45 1.40551e-05 400 5 3 9 [+] picture button
C14orf149 SINFRUT00000135947 CDNA FLJ25436 fis, clone TST08261. [Source:Uniprot/SPTREMBL;Acc:Q96LJ5]
16.654 -15.32 1.51404e-05 400 5 2 6 [+] picture button
SINFRUT00000179142 Homolog of Homo sapiens "Solute carrier family 6 (Neurotransmitter transporter, GABA), member 13 [Source:IPI;Acc:IPI00152335]"
15.9966 -14.77 1.7803e-05 400 5 4 10 [+] picture button
SESN1 SINFRUT00000164431 Sestrin-1 (p53-regulated protein PA26). [Source:Uniprot/SWISSPROT;Acc:Q9Y6P5]
16.8388 -19.29 2.09463e-05 400 6 4 6 [+] picture button
CORO7 SINFRUT00000147427 Coronin-7 (70 kDa WD repeat tumor rejection antigen homolog). [Source:Uniprot/SWISSPROT;Acc:P57737]
17.2018 -15.8 2.52423e-05 400 8 3 8 [+] picture button
SLMO2 (2 of 2) SINFRUT00000180163 Uncharacterized protein C20orf45. [Source:Uniprot/SWISSPROT;Acc:Q9Y3B1]
17.5305 -14.93 2.77701e-05 400 3 3 8 [+] picture button
Q9W6R4_FUGRU SINFRUT00000161960 Protein phosphatase 1. [Source:Uniprot/SPTREMBL;Acc:Q9W6R4]
18.1879 -19.11 2.805e-05 400 6 2 9 [+] picture button
MTMR14 SINFRUT00000138792 Uncharacterized protein C3orf29 precursor (HCV NS5A-transactivated protein 4 splice variant A-binding protein 1) (NS5ATP4ABP1). [Source:Uniprot/SWISSPROT;Acc:Q8NCE2]
16.4348 -15.32 2.98734e-05 400 5 3 5 [+] picture button
ZIC2 SINFRUT00000161434 Zinc finger protein ZIC 2 (Zinc finger protein of the cerebellum 2). [Source:Uniprot/SWISSPROT;Acc:O95409]
17.4209 -15.91 3.1433e-05 400 6 7 6 [+] picture button
NP_001004354.1 SINFRUT00000180585 similar to ankyrin-repeat protein Nrarp (MGC61598), mRNA [Source:RefSeq_dna;Acc:NM_001004354]
16.1061 -13.87 3.67898e-05 400 6 4 9 [+] picture button
FGF10 (2 of 2) SINFRUT00000143238 Fibroblast growth factor 10 precursor (FGF-10) (Keratinocyte growth factor 2). [Source:Uniprot/SWISSPROT;Acc:O15520]
17.4209 -16.84 3.84799e-05 400 4 3 7 [+] picture button
RAB23 SINFRUT00000154777 Ras-related protein Rab-23. [Source:Uniprot/SWISSPROT;Acc:Q9ULC3]
16.7635 -19.1 3.93679e-05 400 6 2 8 [+] picture button
FNBP4 SINFRUT00000179973 formin binding protein 4 [Source:RefSeq_peptide;Acc:NP_056123]
16.79 -15.58 4.06397e-05 400 3 4 4 [+] picture button
DZIP1 (1 of 8) SINFRUT00000167936 Zinc finger protein DZIP1 (DAZ-interacting protein 1/2). [Source:Uniprot/SWISSPROT;Acc:Q86YF9]
16.4348 -17.08 4.14371e-05 400 6 2 9 [+] picture button
ISGF3G (2 of 2) SINFRUT00000131746 Transcriptional regulator ISGF3 subunit gamma (Interferon regulatory factor 9) (IRF-9) (IFN-alpha-responsive transcription factor subunit) (Interferon-stimulated gene factor 3 gamma) (ISGF3 p48 subunit) (ISGF- 3 gamma). [Source:Uniprot/SWISSPROT;Acc:Q00978]
17.3114 -14.27 4.6607e-05 400 10 1 13 [+] picture button
ARHGEF16 SINFRUT00000146055 Rho guanine nucleotide exchange factor 16. [Source:Uniprot/SWISSPROT;Acc:Q5VV41]
18.3744 -18.91 4.72754e-05 400 4 2 6 [+] picture button

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Download table: GFF TXT
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