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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-9

652 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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UBE3C SINFRUT00000137557 Ubiquitin-protein ligase E3C (EC 6.3.2.-). [Source:Uniprot/SWISSPROT;Acc:Q15386]
17.2018 -14.48 0.0000000273241 400 4 7 6 [+] picture button
SACS SINFRUT00000167876 Sacsin. [Source:Uniprot/SWISSPROT;Acc:Q9NZJ4]
17.4209 -11.3 0.0000000492256 400 7 5 11 [+] picture button
DTD1 SINFRUT00000137672 Probable D-tyrosyl-tRNA(Tyr) deacylase 1 (EC 3.1.-.-). [Source:Uniprot/SWISSPROT;Acc:Q8TEA8]
16.7635 -14.36 0.0000000781308 400 2 1 2 [+] picture button
SINFRUT00000138761 Homolog of Homo sapiens "Neuronal pentraxin-2 precursor [Source:IPI;Acc:IPI00026946]"
20.7758 -24.88 0.000000144103 400 5 3 7 [+] picture button
MYO1C (2 of 2) SINFRUT00000160392 Myosin-Ic (Myosin I beta) (MMI-beta) (MMIb). [Source:Uniprot/SWISSPROT;Acc:O00159]
17.6792 -14.73 0.000000394337 400 3 2 3 [+] picture button
IGF2BP2 SINFRUT00000166483 Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IGF-II mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (VICKZ family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M1]
16.7635 -15.31 0.000000494354 400 4 8 8 [+] picture button
FRMD6 SINFRUT00000143839 FERM domain-containing protein 6 (Willin). [Source:Uniprot/SWISSPROT;Acc:Q96NE9]
18.0783 -17.64 0.000000552447 400 5 5 5 [+] picture button
ACY1 SINFRUT00000139868 Aminoacylase-1 (EC 3.5.1.14) (N-acyl-L-amino-acid amidohydrolase) (ACY-1). [Source:Uniprot/SWISSPROT;Acc:Q03154]
18.3432 -23.03 0.000000670056 400 5 2 7 [+] picture button
RNF111 SINFRUT00000142922 E3 ubiquitin-protein ligase Arkadia (EC 6.3.2.-) (RING finger protein 111). [Source:Uniprot/SWISSPROT;Acc:Q6ZNA4]
18.4606 -20.74 0.00000196431 400 4 13 8 [+] picture button
GALNT3 SINFRUT00000148328 Polypeptide N-acetylgalactosaminyltransferase 3 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 3) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 3) (Polypeptide GalNAc transferase 3) (GalNAc-T3) (pp-GaNTase 3). [Source:Uniprot/SWISSPROT;Acc:Q14435]
17.6028 -15.85 0.00000208983 400 7 2 14 [+] picture button
FBN1 SINFRUT00000178382 Fibrillin-1 precursor. [Source:Uniprot/SWISSPROT;Acc:P35555]
18.3432 -19.16 0.00000249733 400 4 4 3 [+] picture button
SLC38A6 SINFRUT00000177119 N system amino acid transporter NAT-1 [Source:RefSeq_peptide;Acc:NP_722518]
17.3498 -17.65 0.00000322562 400 6 2 8 [+] picture button
ADCY6 (2 of 2) SINFRUT00000161850 Adenylate cyclase type 6 (EC 4.6.1.1) (Adenylate cyclase type VI) (ATP pyrophosphate-lyase 6) (Adenylyl cyclase 6) (Ca(2+)-inhibitable adenylyl cyclase). [Source:Uniprot/SWISSPROT;Acc:O43306]
17.4743 -14.32 0.0000040157 400 5 4 4 [+] picture button
MGAT1 (2 of 2) SINFRUT00000145289 Alpha-1,3-mannosyl-glycoprotein 2-beta-N-acetylglucosaminyltransferase (EC 2.4.1.101) (N-glycosyl-oligosaccharide-glycoprotein N- acetylglucosaminyltransferase I) (GNT-I) (GlcNAc-T I). [Source:Uniprot/SWISSPROT;Acc:P26572]
16.9827 -16.66 0.00000620823 400 5 2 7 [+] picture button
NP_056496.1 SINFRUT00000152333 B9 protein [Source:RefSeq_peptide;Acc:NP_056496]
16.6869 -13.63 0.00000702975 400 7 1 9 [+] picture button
PFDN5 SINFRUT00000162587 Prefoldin subunit 5 (C-myc-binding protein Mm-1) (Myc modulator 1). [Source:Uniprot/SWISSPROT;Acc:Q99471]
17.4209 -17.51 0.00000719307 400 6 4 8 [+] picture button
SINFRUT00000127902 Homolog of Brachydanio rerio "Lipocalin-type prostaglandin D synthase-like protein. [Source:Uniprot/SPTREMBL;Acc:Q8QGV5]"
17.545 -14.66 0.00000719992 400 2 4 2 [+] picture button
SLC10A3 SINFRUT00000158578 P3 protein (Solute carrier family 10 member 3). [Source:Uniprot/SWISSPROT;Acc:P09131]
16.5996 -11.66 0.000009537 400 8 8 11 [+] picture button
MYOHD1 SINFRUT00000141059 myosin head domain containing 1 isoform 1 [Source:RefSeq_peptide;Acc:NP_079385]
17.7496 -16.6 0.00000970567 400 5 1 7 [+] picture button
SINFRUT00000173500 Homolog of Homo sapiens "Collagen alpha 2(IV) chain precursor [Source:IPI;Acc:IPI00306322]"
19.174 -28.46 0.0000100943 400 5 4 7 [+] picture button
RNF40 SINFRUT00000146146 E3 ubiquitin-protein ligase BRE1B (EC 6.3.2.-) (BRE1-B) (RING finger protein 40) (95 kDa retinoblastoma-associated protein) (RBP95). [Source:Uniprot/SWISSPROT;Acc:O75150]
17.3792 -20.66 0.0000125616 400 6 3 7 [+] picture button
FCMD SINFRUT00000138464 Fukutin (EC 2.-.-.-) (Fukuyama-type congenital muscular dystrophy protein). [Source:Uniprot/SWISSPROT;Acc:O75072]
16.7635 -19.03 0.0000131778 400 3 1 4 [+] picture button
RHOQ SINFRUT00000137980 Rho-related GTP-binding protein RhoQ precursor (Ras-related GTP- binding protein TC10). [Source:Uniprot/SWISSPROT;Acc:P17081]
17.3114 -18.25 0.000013714 400 5 2 8 [+] picture button
CSRP2BP SINFRUT00000155478 Cysteine-rich protein 2-binding protein (CSRP2-binding protein) (CRP2BP) (CRP2-binding partner). [Source:Uniprot/SWISSPROT;Acc:Q9H8E8]
17.3187 -11.81 0.0000261268 400 5 1 5 [+] picture button
GRASP SINFRUT00000130481 General receptor for phosphoinositides 1-associated scaffold protein (GRP1-associated scaffold protein). [Source:Uniprot/SWISSPROT;Acc:Q7Z6J2]
17.1455 -14.2 0.0000280577 400 5 1 8 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
18.5176 -16.28 0.0000282815 400 9 5 9 [+] picture button
CNOT3 (2 of 2) SINFRUT00000178469 CCR4-NOT transcription complex subunit 3 (CCR4-associated factor 3) (Leukocyte receptor cluster member 2). [Source:Uniprot/SWISSPROT;Acc:O75175]
18.0783 -18.35 0.0000310146 400 5 3 8 [+] picture button
SLC27A4 SINFRUT00000151747 Long-chain fatty acid transport protein 4 (EC 6.2.1.-) (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4). [Source:Uniprot/SWISSPROT;Acc:Q6P1M0]
16.5705 -18.99 0.000036492 400 4 4 4 [+] picture button
C9orf23 SINFRUT00000158562 Alba-like protein C9orf23. [Source:Uniprot/SWISSPROT;Acc:Q8N5L8]
16.7635 -16.94 0.0000400369 400 6 2 8 [+] picture button
CCDC90A SINFRUT00000154561 coiled-coil domain containing 90A [Source:RefSeq_peptide;Acc:NP_001026883]
16.9827 -18.66 0.0000422725 400 5 1 6 [+] picture button
RPAP1 SINFRUT00000174778 RNA polymerase II-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BWH6]
17.64 -19.18 0.0000440533 400 10 1 8 [+] picture button
PGRMC2 SINFRUT00000147314 Membrane-associated progesterone receptor component 2 (Progesterone membrane-binding protein) (Steroid receptor protein DG6). [Source:Uniprot/SWISSPROT;Acc:O15173]
16.6303 -14.61 0.0000542864 400 5 6 5 [+] picture button
CTHRC1 SINFRUT00000130760 Collagen triple helix repeat-containing protein 1 precursor (NMTC1 protein). [Source:Uniprot/SWISSPROT;Acc:Q96CG8]
17.5398 -17.07 0.0000564053 400 7 2 10 [+] picture button
KYNU SINFRUT00000131139 Kynureninase (EC 3.7.1.3) (L-kynurenine hydrolase). [Source:Uniprot/SWISSPROT;Acc:Q16719]
17.0936 -16.37 0.0000617662 400 6 2 7 [+] picture button
APRIN (3 of 3) SINFRUT00000159693 androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847]
16.654 -15.48 0.0000638994 400 4 1 5 [+] picture button
C20orf160 SINFRUT00000166995 Uncharacterized protein C20orf160. [Source:Uniprot/SWISSPROT;Acc:Q9NUG4]
16.9827 -18.52 0.0000682719 400 3 1 3 [+] picture button
FAM83D SINFRUT00000164814 Protein FAM83D. [Source:Uniprot/SWISSPROT;Acc:Q9H4H8]
17.5305 -15.35 0.0000720287 400 6 2 7 [+] picture button
SINFRUT00000178962 NOT ANNOTATED
18.3587 -24.15 0.0000763989 400 2 2 2 [+] picture button
SINFRUT00000180687 Homolog of Brachydanio rerio "E74-like factor-1. [Source:Uniprot/SPTREMBL;Acc:Q9YH25]"
18.5577 -19.73 0.0000871568 400 5 2 4 [+] picture button
PACRG SINFRUT00000152819 Parkin coregulated gene protein (PARK2 coregulated) (Molecular chaperone/chaperonin-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96M98]
17.4209 -16.69 0.0000913396 400 6 1 8 [+] picture button
TINAGL1 SINFRUT00000177699 Tubulointerstitial nephritis antigen-like precursor (Tubulointerstitial nephritis antigen-related protein) (TIN Ag-related protein) (TIN-Ag-RP) (Glucocorticoid-inducible protein 5) (Oxidized LDL-responsive gene 2 protein) (OLRG-2). [Source:Uniprot/SWISSPROT;Acc:Q9GZM7]
17.2018 -15.54 0.0000953463 400 2 1 2 [+] picture button
GFPT2 SINFRUT00000157106 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 2 (EC 2.6.1.16) (Hexosephosphate aminotransferase 2) (D-fructose-6- phosphate amidotransferase 2) (GFAT 2) (GFAT2). [Source:Uniprot/SWISSPROT;Acc:O94808]
16.5864 -15.11 0.0000985685 400 7 3 14 [+] picture button
TNFSF5IP1 SINFRUT00000143532 tumor necrosis factor superfamily, member 5-induced protein 1 [Source:RefSeq_peptide;Acc:NP_064617]
16.7635 -16.62 0.000101607 400 2 4 4 [+] picture button
EIF5A2 SINFRUT00000135373 Eukaryotic translation initiation factor 5A-2 (eIF-5A-2) (eIF-5A2) (Eukaryotic initiation factor 5A isoform 2). [Source:Uniprot/SWISSPROT;Acc:Q9GZV4]
17.2399 -13.31 0.000103063 400 4 4 7 [+] picture button
KIAA0423 SINFRUT00000145061 Uncharacterized protein KIAA0423. [Source:Uniprot/SWISSPROT;Acc:Q9Y4F4]
17.0922 -19.46 0.000107463 400 6 1 8 [+] picture button
SASS6 SINFRUT00000151492 Spindle assembly abnormal protein 6 homolog (HsSAS-6). [Source:Uniprot/SWISSPROT;Acc:Q6UVJ0]
17.4209 -14.78 0.000108764 400 8 2 9 [+] picture button
EYA2 SINFRUT00000145923 Eyes absent homolog 2 (EC 3.1.3.48). [Source:Uniprot/SWISSPROT;Acc:O00167]
17.792 -17.67 0.000138761 400 10 4 12 [+] picture button
PTS SINFRUT00000178501 6-pyruvoyl tetrahydrobiopterin synthase (EC 4.2.3.12) (PTPS) (PTP synthase). [Source:Uniprot/SWISSPROT;Acc:Q03393]
17.5305 -15.39 0.000142616 400 7 3 12 [+] picture button
SHROOM4 SINFRUT00000180997 shroom family member 4 [Source:RefSeq_peptide;Acc:NP_065768]
17.2018 -14.42 0.000144276 400 5 5 6 [+] picture button
TDH SINFRUT00000133863 L-threonine dehydrogenase (TDH) on chromosome 8 [Source:RefSeq_dna;Acc:NR_001578]
17.4209 -16.35 0.000172664 400 7 4 8 [+] picture button

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Download table: GFF TXT
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