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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-7

696 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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HERPUD2 (1 of 2) SINFRUT00000148257 Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q9BSE4]
17.2415 -21.25 8.08441e-10 400 2 2 3 [+] picture button
OGFRL1 SINFRUT00000180583 opioid growth factor receptor-like 1 [Source:RefSeq_peptide;Acc:NP_078852]
16.6003 -16.88 6.68735e-07 400 2 4 3 [+] picture button
SINFRUT00000180752 NOT ANNOTATED
16.6003 -17.54 1e-06 400 5 1 2 [+] picture button
HDC SINFRUT00000172924 Histidine decarboxylase (EC 4.1.1.22) (HDC). [Source:Uniprot/SWISSPROT;Acc:P19113]
16.8737 -18.83 3.29831e-06 400 3 2 5 [+] picture button
CLK2P SINFRUT00000160927 CDC-like kinase 2, pseudogene (CLK2P) on chromosome 7 [Source:RefSeq_dna;Acc:NR_002711]
16.9323 -14.92 4.71407e-06 400 3 2 5 [+] picture button
CKB (2 of 2) SINFRUT00000146279 Creatine kinase B-type (EC 2.7.3.2) (Creatine kinase B chain) (B-CK). [Source:Uniprot/SWISSPROT;Acc:P12277]
18.3168 -16.76 5.89464e-06 400 3 4 4 [+] picture button
Q7T1T8_FUGRU SINFRUT00000144852 Tmc5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7T1T8]
17.1536 -12.93 5.95501e-06 400 3 2 4 [+] picture button
SINFRUT00000128466 Homolog of Gallus gallus "Tankyrase 2. [Source:Uniprot/SPTREMBL;Acc:Q800E0]"
17.8176 -17.93 7.58942e-06 400 5 2 5 [+] picture button
C6orf152 SINFRUT00000133876 Uncharacterized protein C6orf152. [Source:Uniprot/SWISSPROT;Acc:Q86VQ0]
16.8216 -17.99 8.29357e-06 400 11 2 14 [+] picture button
RHOH SINFRUT00000131884 Rho-related GTP-binding protein RhoH precursor (GTP-binding protein TTF). [Source:Uniprot/SWISSPROT;Acc:Q15669]
16.6003 -12.95 8.92046e-06 400 4 1 4 [+] picture button
PIWIL1 SINFRUT00000168617 Piwi-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q96J94]
16.4896 -13.91 8.99302e-06 400 6 2 6 [+] picture button
IMPDH2 SINFRUT00000145930 Inosine-5'-monophosphate dehydrogenase 2 (EC 1.1.1.205) (IMP dehydrogenase 2) (IMPDH-II) (IMPD 2). [Source:Uniprot/SWISSPROT;Acc:P12268]
16.9702 -15.16 1.16956e-05 400 5 5 5 [+] picture button
ARRDC2 SINFRUT00000133851 Arrestin domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TBH0]
16.2683 -15.28 1.70746e-05 400 8 2 8 [+] picture button
CTSB (1 of 2) SINFRUT00000150861 Cathepsin B precursor (EC 3.4.22.1) (Cathepsin B1) (APP secretase) (APPS) [Contains: Cathepsin B light chain; Cathepsin B heavy chain]. [Source:Uniprot/SWISSPROT;Acc:P07858]
19.2326 -23.17 2.78234e-05 400 7 3 8 [+] picture button
SLC26A2 SINFRUT00000153558 Sulfate transporter (Diastrophic dysplasia protein) (Solute carrier family 26 member 2). [Source:Uniprot/SWISSPROT;Acc:P50443]
18.3081 -23.59 3.2948e-05 400 7 2 9 [+] picture button
PPARD SINFRUT00000154296 Peroxisome proliferator-activated receptor delta (PPAR-delta) (PPAR- beta) (Nuclear hormone receptor 1) (NUC1) (NUCI). [Source:Uniprot/SWISSPROT;Acc:Q03181]
16.9323 -15.53 3.94549e-05 400 6 2 11 [+] picture button
MAD2L2 SINFRUT00000180596 Mitotic spindle assembly checkpoint protein MAD2B (MAD2-like 2) (hREV7). [Source:Uniprot/SWISSPROT;Acc:Q9UI95]
17.5963 -18.16 5.42867e-05 400 8 2 11 [+] picture button
CCDC84 SINFRUT00000142201 Coiled-coil domain-containing protein 84. [Source:Uniprot/SWISSPROT;Acc:Q86UT8]
17.2643 -18.28 5.54756e-05 400 7 2 8 [+] picture button
NP_001004320.1 SINFRUT00000165274 CDNA FLJ16237 fis, clone HCASM2002754 (Hypothetical protein FLJ16237). [Source:Uniprot/SPTREMBL;Acc:Q6ZNB7]
16.4896 -14.79 5.82971e-05 400 6 2 6 [+] picture button
STX11 SINFRUT00000143702 Syntaxin-11. [Source:Uniprot/SWISSPROT;Acc:O75558]
16.4896 -15.6 5.96956e-05 400 8 1 11 [+] picture button
PRPF39 SINFRUT00000144596 Pre-mRNA-processing factor 39 (PRP39 homolog). [Source:Uniprot/SWISSPROT;Acc:Q86UA1]
18.4705 -17.74 6.73937e-05 400 10 3 12 [+] picture button
FAHD1 SINFRUT00000182354 Fumarylacetoacetate hydrolase domain-containing protein 1 (EC 3.-.-.-) (YISK-like). [Source:Uniprot/SWISSPROT;Acc:Q6P587]
17.9838 -15.16 7.40189e-05 400 6 2 8 [+] picture button
EIF4ENIF1 SINFRUT00000150769 Eukaryotic translation initiation factor 4E transporter (eIF4E transporter) (4E-T) (Eukaryotic translation initiation factor 4E nuclear import factor 1). [Source:Uniprot/SWISSPROT;Acc:Q9NRA8]
17.9554 -19.14 7.52466e-05 400 3 2 5 [+] picture button
ZDHHC18 SINFRUT00000141386 Palmitoyltransferase ZDHHC18 (EC 2.3.1.-) (Zinc finger DHHC domain- containing protein 18) (DHHC-18). [Source:Uniprot/SWISSPROT;Acc:Q9NUE0]
16.9323 -13.64 8.58782e-05 400 7 3 9 [+] picture button
TMEM106A SINFRUT00000178329 Transmembrane protein 106A. [Source:Uniprot/SWISSPROT;Acc:Q96A25]
16.8882 -13.48 9.5819e-05 400 5 2 6 [+] picture button
C6orf66 SINFRUT00000149655 UPF0240 protein C6orf66. [Source:Uniprot/SWISSPROT;Acc:Q9P032]
17.2643 -17.92 0.000102936 400 3 1 3 [+] picture button
JAKMIP2 SINFRUT00000136579 Janus kinase and microtubule-interacting protein 2. [Source:Uniprot/SWISSPROT;Acc:Q96AA8]
16.7423 -13.63 0.000104345 400 2 2 5 [+] picture button
NP_001009993.2 SINFRUT00000132772 p20 (LOC130074), mRNA [Source:RefSeq_dna;Acc:NM_001009993]
16.2608 -19.31 0.000110677 400 7 3 11 [+] picture button
PROM1 (1 of 2) SINFRUT00000160368 Prominin-1 precursor (Prominin-like protein 1) (Antigen AC133) (CD133 antigen). [Source:Uniprot/SWISSPROT;Acc:O43490]
16.9323 -12.54 0.000111823 400 7 2 8 [+] picture button
NP_001027837.1 SINFRUT00000136333 selenocysteine tRNA activating factor [Source:RefSeq_peptide;Acc:NP_001027837]
18.4174 -20.56 0.000112958 400 10 3 11 [+] picture button
OPTN SINFRUT00000172035 Optineurin (Optic neuropathy-inducing protein) (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA- IntP). [Source:Uniprot/SWISSPROT;Acc:Q96CV9]
16.4896 -14.07 0.000114671 400 6 2 7 [+] picture button
NP_079121.1 SINFRUT00000138619 CDNA FLJ14154 fis, clone NT2RM1000341 (FLJ14154 protein). [Source:Uniprot/SPTREMBL;Acc:Q9H7X0]
17.4856 -15.54 0.000123282 400 8 2 12 [+] picture button
SINFRUT00000129590 Homolog of Homo sapiens "Selenoprotein O [Source:IPI;Acc:IPI00031666]"
17.4856 -12.63 0.000123521 400 5 2 6 [+] picture button
PERP SINFRUT00000146391 p53 apoptosis effector related to PMP-22 (Keratinocytes-associated protein 1) (KCP-1) (P53-induced protein PIGPC1) (Transmembrane protein THW). [Source:Uniprot/SWISSPROT;Acc:Q96FX8]
16.3047 -15.33 0.000126692 400 3 1 3 [+] picture button
SINFRUT00000145681 Homolog of Brachydanio rerio "RAB family member rab-7. [Source:Uniprot/SPTREMBL;Acc:Q7T2C6]"
17.7441 -18.92 0.000136866 400 2 4 2 [+] picture button
UTP11L SINFRUT00000153381 Probable U3 small nucleolar RNA-associated protein 11 (U3 snoRNA- associated protein 11) (UTP11-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A2]
16.2683 -12.84 0.000138738 400 6 3 8 [+] picture button
WNT5A SINFRUT00000152673 Protein Wnt-5a precursor. [Source:Uniprot/SWISSPROT;Acc:P41221]
17.4146 -15.82 0.000162778 400 3 1 3 [+] picture button
RASL10A SINFRUT00000155151 Ras-like protein family 10 member A precursor (Ras-like protein RRP22) (RAS-related protein on chromosome 22). [Source:Uniprot/SWISSPROT;Acc:Q92737]
20.031 -22.56 0.000164138 400 5 3 6 [+] picture button
RACGAP1 (1 of 2) SINFRUT00000170560 Rac GTPase-activating protein 1 (MgcRacGAP). [Source:Uniprot/SWISSPROT;Acc:Q9H0H5]
16.2683 -16.56 0.000167893 400 7 2 8 [+] picture button
UNC5B SINFRUT00000170814 Netrin receptor UNC5B precursor (Unc-5 homolog B) (Unc-5 homolog 2) (p53-regulated receptor for death and life protein 1). [Source:Uniprot/SWISSPROT;Acc:Q8IZJ1]
17.3128 -15.36 0.000171091 400 3 2 4 [+] picture button
PDE9A SINFRUT00000172037 High-affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A (EC 3.1.4.35). [Source:Uniprot/SWISSPROT;Acc:O76083]
18.3273 -15.97 0.000201345 400 4 2 6 [+] picture button
HTRA1 (2 of 2) SINFRUT00000181210 Serine protease HTRA1 precursor (EC 3.4.21.-) (L56) (Serine protease 11). [Source:Uniprot/SWISSPROT;Acc:Q92743]
17.375 -16.55 0.000215612 400 5 3 9 [+] picture button
MRPL30 SINFRUT00000180866 39S ribosomal protein L30, mitochondrial precursor (L30mt) (MRP-L30). [Source:Uniprot/SWISSPROT;Acc:Q8TCC3]
16.9323 -14.75 0.000248498 400 5 2 6 [+] picture button
CKM (2 of 2) SINFRUT00000152148 Creatine kinase M-type (EC 2.7.3.2) (Creatine kinase M chain) (M-CK). [Source:Uniprot/SWISSPROT;Acc:P06732]
18.6036 -20.35 0.000257219 400 3 2 3 [+] picture button
FIGNL1 SINFRUT00000175553 fidgetin-like 1 [Source:RefSeq_peptide;Acc:NP_001036227]
16.9323 -13.31 0.000279569 400 5 2 5 [+] picture button
SQSTM1 SINFRUT00000146081 Sequestosome-1 (Phosphotyrosine-independent ligand for the Lck SH2 domain of 62 kDa) (Ubiquitin-binding protein p62) (EBI3-associated protein of 60 kDa) (p60) (EBIAP). [Source:Uniprot/SWISSPROT;Acc:Q13501]
17.8176 -15.53 0.000290472 400 5 1 6 [+] picture button
Q8JH79_FUGRU SINFRUT00000155397 Homeodomain protein HOMEZ. [Source:Uniprot/SPTREMBL;Acc:Q8JH79]
16.5645 -16.06 0.000310966 400 6 4 8 [+] picture button
CD2BP2 SINFRUT00000135471 CD2 antigen cytoplasmic tail-binding protein 2 (CD2 cytoplasmic domain-binding protein) (CD2 tail-binding protein). [Source:Uniprot/SWISSPROT;Acc:O95400]
17.1969 -13.45 0.000321019 400 7 1 12 [+] picture button
RRAGB SINFRUT00000150511 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
16.8599 -15.79 0.000331018 400 10 3 21 [+] picture button
SINFRUT00000159063 Homolog of Gallus gallus "Chromobox protein (CHCB2). [Source:Uniprot/SPTREMBL;Acc:O93481]"
17.3292 -14.81 0.000338765 400 5 2 7 [+] picture button

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Download table: GFF TXT
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