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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-26

819 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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UBE2A SINFRUT00000182705 Ubiquitin-conjugating enzyme E2 A (EC 6.3.2.19) (Ubiquitin-protein ligase A) (Ubiquitin carrier protein A) (HR6A) (hHR6A). [Source:Uniprot/SWISSPROT;Acc:P49459]
15.705 -18.23 0.00000000687135 400 7 3 7 [+] picture button
GRHL3 SINFRUT00000161863 Grainyhead-like protein 3 homolog (Sister of mammalian grainyhead) (Transcription factor CP2-like 4). [Source:Uniprot/SWISSPROT;Acc:Q8TE85]
17.2785 -16.35 0.0000000149059 400 5 3 9 [+] picture button
TNRC6A SINFRUT00000143627 Trinucleotide repeat-containing gene 6A protein (CAG repeat protein 26) (Glycine-tryptophan protein of 182 kDa) (GW182 autoantigen) (Protein GW1) (EMSY interactor protein). [Source:Uniprot/SWISSPROT;Acc:Q8NDV7]
18.038 -16.72 0.0000000506713 400 8 12 10 [+] picture button
SMAD1 SINFRUT00000133755 Mothers against decapentaplegic homolog 1 (SMAD 1) (Mothers against DPP homolog 1) (Mad-related protein 1) (Transforming growth factor- beta-signaling protein 1) (BSP-1) (hSMAD1) (JV4-1). [Source:Uniprot/SWISSPROT;Acc:Q15797]
16.5032 -12.4 0.000000195021 400 7 3 9 [+] picture button
SINFRUT00000159356 Homolog of Homo sapiens "Splice Isoform 2 of Signal-induced proliferation-associated 1 like protein 1 [Source:IPI;Acc:IPI00435422]"
18.4856 -15.31 0.000000306958 400 9 4 12 [+] picture button
DUSP5 SINFRUT00000145161 Dual specificity protein phosphatase 5 (EC 3.1.3.48) (EC 3.1.3.16) (Dual specificity protein phosphatase hVH3). [Source:Uniprot/SWISSPROT;Acc:Q16690]
16.7728 -12.62 0.000000503527 400 5 2 11 [+] picture button
TMTC4 SINFRUT00000173486 Transmembrane and TPR repeat-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q5T4D3]
17.6613 -11.23 0.00000064803 400 7 2 10 [+] picture button
GPR151 SINFRUT00000127742 Probable G-protein coupled receptor 151 (G-protein coupled receptor PGR7) (GPCR-2037). [Source:Uniprot/SWISSPROT;Acc:Q8TDV0]
15.7446 -13.06 0.00000115635 400 8 2 15 [+] picture button
USP3 SINFRUT00000129271 Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15) (Ubiquitin thioesterase 3) (Ubiquitin-specific-processing protease 3) (Deubiquitinating enzyme 3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I4]
15.7446 -10.27 0.00000122888 400 7 2 11 [+] picture button
SEMA6D SINFRUT00000181350 Semaphorin-6D precursor. [Source:Uniprot/SWISSPROT;Acc:Q8NFY4]
18.6072 -21.1 0.00000166712 400 5 7 5 [+] picture button
HECTD3 SINFRUT00000134581 Probable E3 ubiquitin-protein ligase HECTD3 (HECT domain-containing protein 3). [Source:Uniprot/SWISSPROT;Acc:Q5T447]
15.8572 -15.03 0.00000322768 400 6 2 6 [+] picture button
HOXD3 SINFRUT00000131831 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
17.2396 -13.97 0.00000395831 400 9 4 16 [+] picture button
GFM1 SINFRUT00000136434 Elongation factor G 1, mitochondrial precursor (mEF-G 1) (Elongation factor G1). [Source:Uniprot/SWISSPROT;Acc:Q96RP9]
16.5994 -12.27 0.00000460654 400 8 2 9 [+] picture button
C5orf28 SINFRUT00000134808 Uncharacterized protein C5orf28. [Source:Uniprot/SWISSPROT;Acc:Q0VDI3]
15.7446 -15.95 0.00000602957 400 3 1 6 [+] picture button
CPOX SINFRUT00000133100 Coproporphyrinogen III oxidase, mitochondrial precursor (EC 1.3.3.3) (Coproporphyrinogenase) (Coprogen oxidase) (COX). [Source:Uniprot/SWISSPROT;Acc:P36551]
15.9648 -11.27 0.00000672427 400 6 2 7 [+] picture button
BAMBI SINFRUT00000143916 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
16.7143 -12.88 0.00000678462 400 5 13 14 [+] picture button
GBA2 SINFRUT00000137700 Non-lysosomal glucosylceramidase (EC 3.2.1.45) (NLGase) (Glucosylceramidase 2) (Beta-glucocerebrosidase 2) (Beta-glucosidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HCG7]
16.5521 -12.65 0.00000727284 400 3 2 4 [+] picture button
OBFC2A SINFRUT00000127690 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
16.079 -10.82 0.00000746274 400 5 2 11 [+] picture button
MGAT5 SINFRUT00000158222 Alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase V (EC 2.4.1.155) (Mannoside acetylglucosaminyltransferase 5) (Alpha- mannoside beta-1,6-N-acetylglucosaminyltransferase) (N- acetylglucosaminyl-transferase V) (GNT-V) (GlcNAc-T V). [Source:Uniprot/SWISSPROT;Acc:Q09328]
15.7446 -17.33 0.00000752193 400 4 3 5 [+] picture button
C9orf19 SINFRUT00000136612 Golgi-associated plant pathogenesis-related protein 1 (Golgi- associated PR-1 protein) (GAPR-1) (Glioma pathogenesis-related protein 2) (GliPR 2). [Source:Uniprot/SWISSPROT;Acc:Q9H4G4]
18.8747 -18.4 0.00000850281 400 9 2 14 [+] picture button
STYX SINFRUT00000159665 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
17.3961 -12.96 0.00000854279 400 10 6 17 [+] picture button
LRRC20 SINFRUT00000142484 Leucine-rich repeat-containing protein 20. [Source:Uniprot/SWISSPROT;Acc:Q8TCA0]
16.8456 -17.62 0.00000893092 400 4 2 8 [+] picture button
NP_001011731.1 SINFRUT00000152770 hyaluronan mediated motility receptor [Source:RefSeq_peptide;Acc:NP_001011731]
16.3781 -17.64 0.0000104576 400 6 2 6 [+] picture button
KARS SINFRUT00000141816 Lysyl-tRNA synthetase (EC 6.1.1.6) (Lysine--tRNA ligase) (LysRS). [Source:Uniprot/SWISSPROT;Acc:Q15046]
17.0658 -19.05 0.0000105843 400 6 2 5 [+] picture button
TLE3 (2 of 2) SINFRUT00000165042 Transducin-like enhancer protein 3 (ESG3). [Source:Uniprot/SWISSPROT;Acc:Q04726]
16.9557 -24.27 0.0000163527 400 9 2 9 [+] picture button
HMCN1 SINFRUT00000139804 Hemicentin-1 precursor (Fibulin-6) (FIBL-6). [Source:Uniprot/SWISSPROT;Acc:Q96RW7]
17.8365 -19.55 0.0000179965 400 2 2 5 [+] picture button
Q7T2W5_FUGRU SINFRUT00000158058 Nicotinic acetylcholine receptor alpha 1a subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7T2W5]
16.185 -15.5 0.0000188002 400 6 2 7 [+] picture button
PDP2_HUMAN SINFRUT00000133287 [Pyruvate dehydrogenase [lipoamide]]-phosphatase 2, mitochondrial precursor (EC 3.1.3.43) (PDP 2) (Pyruvate dehydrogenase phosphatase, catalytic subunit 2) (PDPC 2). [Source:Uniprot/SWISSPROT;Acc:Q9P2J9]
16.2951 -13.25 0.0000242657 400 5 3 7 [+] picture button
PIGV SINFRUT00000153727 GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Phosphatidylinositol-glycan biosynthesis class V protein) (PIG-V). [Source:Uniprot/SWISSPROT;Acc:Q9NUD9]
16.185 -14.1 0.0000243935 400 8 3 14 [+] picture button
SINFRUT00000160558 Homolog of Homo sapiens "Splice Isoform 3 of Protein C20orf54 [Source:IPI;Acc:IPI00334593]"
17.8745 -14.2 0.0000254486 400 8 3 11 [+] picture button
DCTN4 SINFRUT00000178844 Dynactin subunit 4 (Dynactin subunit p62). [Source:Uniprot/SWISSPROT;Acc:Q9UJW0]
19.2553 -22.49 0.000027195 400 5 2 5 [+] picture button
GJA9 SINFRUT00000146257 Gap junction alpha-9 protein (Connexin-36) (Cx36). [Source:Uniprot/SWISSPROT;Acc:Q9UKL4]
17.9568 -17.37 0.0000272865 400 5 4 9 [+] picture button
SG494_HUMAN SINFRUT00000154386 Uncharacterized serine/threonine-protein kinase SgK494 (EC 2.7.11.1) (Sugen kinase 494). [Source:Uniprot/SWISSPROT;Acc:Q96LW2]
15.8547 -11.71 0.0000286193 400 10 1 10 [+] picture button
CCDC21 SINFRUT00000153702 Coiled-coil domain-containing protein 21. [Source:Uniprot/SWISSPROT;Acc:Q6P2H3]
17.3961 -14.31 0.0000319824 400 5 4 6 [+] picture button
JMJD4 SINFRUT00000144303 jumonji domain containing 4 [Source:RefSeq_peptide;Acc:NP_075383]
17.6163 -12.43 0.0000333101 400 6 2 11 [+] picture button
SINFRUT00000180418 Homolog of Homo sapiens "PREDICTED "similar to ADP-ribosylation factor-like 1 [Source:IPI;Acc:IPI00242972]"
15.9648 -14.29 0.0000339594 400 7 2 7 [+] picture button
CRELD1 SINFRUT00000132197 Cysteine-rich with EGF-like domain protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HD1]
17.8365 -17.77 0.0000355986 400 5 3 6 [+] picture button
TRIO (2 of 2) SINFRUT00000149687 Triple functional domain protein (EC 2.7.11.1) (PTPRF-interacting protein). [Source:Uniprot/SWISSPROT;Acc:O75962]
16.0049 -10.51 0.000040073 400 5 2 5 [+] picture button
GPR149 SINFRUT00000154407 Probable G-protein coupled receptor 149 (G-protein coupled receptor PGR10). [Source:Uniprot/SWISSPROT;Acc:Q86SP6]
17.3961 -14.52 0.0000478633 400 3 1 3 [+] picture button
CD2AP SINFRUT00000153991 CD2-associated protein (Cas ligand with multiple SH3 domains) (Adapter protein CMS). [Source:Uniprot/SWISSPROT;Acc:Q9Y5K6]
16.6254 -18.34 0.0000494222 400 6 1 5 [+] picture button
SINFRUT00000136648 Homolog of Homo sapiens "BGR protein [Source:IPI;Acc:IPI00107719]"
18.9195 -20.81 0.0000505641 400 4 4 7 [+] picture button
COX4I1 SINFRUT00000134199 Cytochrome c oxidase subunit 4 isoform 1, mitochondrial precursor (EC 1.9.3.1) (Cytochrome c oxidase subunit IV isoform 1) (COX IV-1) (Cytochrome c oxidase polypeptide IV). [Source:Uniprot/SWISSPROT;Acc:P13073]
15.9648 -13.99 0.000052021 400 6 2 8 [+] picture button
C6orf111 SINFRUT00000151636 Splicing factor, arginine/serine-rich 130 (Serine-arginine-rich- splicing regulatory protein 130) (SRrp130) (SR-rich protein) (SR- related protein). [Source:Uniprot/SWISSPROT;Acc:Q8TF01]
16.0749 -12.3 0.0000559129 400 9 2 20 [+] picture button
TPI1 SINFRUT00000156180 Triosephosphate isomerase (EC 5.3.1.1) (TIM) (Triose-phosphate isomerase). [Source:Uniprot/SWISSPROT;Acc:P60174]
16.7822 -20.73 0.0000570699 400 6 4 12 [+] picture button
SINFRUT00000147305 Homolog of Homo sapiens "Dihydropyridine-sensitive L-type, calcium channel alpha-2/delta subunits precursor [Source:IPI;Acc:IPI00479514]"
20.282 -21.76 0.000059992 400 3 2 3 [+] picture button
C3orf37 SINFRUT00000138707 UPF0361 protein DC12. [Source:Uniprot/SWISSPROT;Acc:Q96FZ2]
17.9466 -13.71 0.0000612185 400 4 3 8 [+] picture button
CENPJ SINFRUT00000169078 Centromere protein J (CENP-J) (Centrosomal P4.1-associated protein) (LAG-3-associated protein) (LYST-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9HC77]
17.5502 -14.08 0.0000623724 400 8 2 12 [+] picture button
SINFRUT00000159860 Homolog of Homo sapiens "RAI14 isoform [Source:IPI;Acc:IPI00292953]"
16.4052 -18.88 0.0000721576 400 3 2 2 [+] picture button
PRPF18 SINFRUT00000178043 Pre-mRNA-splicing factor 18 (PRP18 homolog) (hPRP18). [Source:Uniprot/SWISSPROT;Acc:Q99633]
16.4052 -22.29 0.0000754955 400 6 1 12 [+] picture button
C19orf50 SINFRUT00000162396 Uncharacterized protein C19orf50 (Fragment). [Source:Uniprot/SPTREMBL;Acc:O76098]
17.286 -13.36 0.0000775938 400 4 1 5 [+] picture button

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Download table: GFF TXT
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