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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-24

780 hits found.


Page 1 of 16
1 2 3 4 5 6 7 8 9 10 11 .. 16 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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BRAF SINFRUT00000159976 B-Raf proto-oncogene serine/threonine-protein kinase (EC 2.7.11.1) (p94) (v-Raf murine sarcoma viral oncogene homolog B1). [Source:Uniprot/SWISSPROT;Acc:P15056]
17.286 -23.07 1e-06 400 12 1 7 [+] picture button
NDUFV3 (2 of 2) SINFRUT00000142274 NADH dehydrogenase [ubiquinone] flavoprotein 3, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 9 kDa subunit) (Complex I-9kD) (CI-9kD) (Renal carcinoma antigen NY-REN- 4). [Source:Uniprot/SWISSPROT;Acc:P56181]
16.4317 -15.5 1e-06 400 5 1 3 [+] picture button
SINFRUT00000164293 Homolog of Homo sapiens "Splice Isoform 2 of Probable ubiquitin carboxyl-terminal hydrolase CYLD [Source:IPI;Acc:IPI00554819]"
17.0555 -28.06 1e-06 400 5 1 1 [+] picture button
Q5QQ37_FUGRU SINFRUT00000161260 Alpha-2,6-sialyltransferase ST6Gal II (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5QQ37]
18.3176 -26.99 1.44842e-06 400 4 4 4 [+] picture button
STARD3 SINFRUT00000161823 StAR-related lipid transfer protein 3 (StARD3) (START domain- containing protein 3) (Metastatic lymph node protein 64) (Protein MLN 64) (Protein CAB1). [Source:Uniprot/SWISSPROT;Acc:Q14849]
17.0223 -23.83 2.09065e-06 400 7 2 8 [+] picture button
ZSWIM5 SINFRUT00000141054 Zinc finger SWIM domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q9P217]
16.0749 -19.81 3.38502e-06 400 6 4 6 [+] picture button
LMO1 SINFRUT00000172705 Rhombotin-1 (LIM domain only protein 1) (Cysteine-rich protein TTG-1) (T-cell translocation protein 1). [Source:Uniprot/SWISSPROT;Acc:P25800]
18.8781 -28.88 4.6729e-06 400 4 6 5 [+] picture button
TSHZ1 (2 of 2) SINFRUT00000173471 Teashirt homolog 1 (Serologically defined colon cancer antigen 3) (Antigen NY-CO-33). [Source:Uniprot/SWISSPROT;Acc:Q6ZSZ6]
16.5521 -17.92 7.58893e-06 400 9 13 12 [+] picture button
CLPP SINFRUT00000156314 Putative ATP-dependent Clp protease proteolytic subunit, mitochondrial precursor (EC 3.4.21.92) (Endopeptidase Clp). [Source:Uniprot/SWISSPROT;Acc:Q16740]
16.7355 -17.73 7.67772e-06 400 4 2 6 [+] picture button
C6orf32 SINFRUT00000164534 Diff48 protein. [Source:Uniprot/SPTREMBL;Acc:Q13529]
17.4596 -22.51 8.22685e-06 400 2 2 6 [+] picture button
SURF2_FUGRU SINFRUT00000137720 Surfeit locus protein 2 (Surf-2). [Source:Uniprot/SWISSPROT;Acc:O57589]
16.8727 -16.35 9.49034e-06 400 5 2 6 [+] picture button
C6orf47 SINFRUT00000178684 Uncharacterized protein C6orf47 (Protein G4). [Source:Uniprot/SWISSPROT;Acc:O95873]
17.6163 -24.01 1.06118e-05 400 5 1 8 [+] picture button
DDB2 SINFRUT00000149805 DNA damage-binding protein 2 (Damage-specific DNA-binding protein 2) (DDB p48 subunit) (DDBb) (UV-damaged DNA-binding protein 2) (UV-DDB 2). [Source:Uniprot/SWISSPROT;Acc:Q92466]
16.2951 -26.02 1.33432e-05 400 4 1 5 [+] picture button
EXDL2 SINFRUT00000167094 Exonuclease 3'-5' domain-like-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9NVH0]
17.1759 -28.18 1.49492e-05 400 3 1 4 [+] picture button
ENC1 SINFRUT00000155306 Ectoderm-neural cortex protein 1 (ENC-1) (p53-induced protein 10) (Nuclear matrix protein NRP/B). [Source:Uniprot/SWISSPROT;Acc:O14682]
17.7264 -21.83 1.57435e-05 400 5 2 6 [+] picture button
KIAA0319L SINFRUT00000152354 polycystic kidney disease 1-like isoform a [Source:RefSeq_peptide;Acc:NP_079150]
17.3392 -23.56 2.06425e-05 400 6 3 10 [+] picture button
MAN1A1 SINFRUT00000135965 Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA (EC 3.2.1.113) (Processing alpha-1,2-mannosidase IA) (Alpha-1,2-mannosidase IA) (Mannosidase alpha class 1A member 1) (Man(9)-alpha-mannosidase) (Man9-mannosidase). [Source:Uniprot/SWISSPROT;Acc:P33908]
17.2533 -19.71 2.12769e-05 400 6 2 10 [+] picture button
SINFRUT00000147359 Homolog of Salmo salar "Zonadhesin-like. [Source:Uniprot/SPTREMBL;Acc:Q5S3N1]"
17.1759 -19.34 2.20377e-05 400 6 1 4 [+] picture button
RAP1A SINFRUT00000129178 Ras-related protein Rap-1A precursor (GTP-binding protein smg-p21A) (Ras-related protein Krev-1) (C21KG) (G-22K). [Source:Uniprot/SWISSPROT;Acc:P62834]
17.0658 -22.76 2.54457e-05 400 2 5 2 [+] picture button
PACSIN3 SINFRUT00000169014 Protein kinase C and casein kinase substrate in neurons protein 3 (SH3 domain-containing protein 6511) (Endophilin I). [Source:Uniprot/SWISSPROT;Acc:Q9UKS6]
17.1527 -18.96 2.76655e-05 400 4 1 4 [+] picture button
PDE11A (2 of 2) SINFRUT00000164132 Dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11A (EC 3.1.4.17) (EC 3.1.4.35) (cAMP and cGMP phosphodiesterase 11A). [Source:Uniprot/SWISSPROT;Acc:Q9HCR9]
17.7007 -18.44 3.1856e-05 400 4 3 6 [+] picture button
RCC1 SINFRUT00000153741 Regulator of chromosome condensation (Chromosome condensation protein 1) (Cell cycle regulatory protein). [Source:Uniprot/SWISSPROT;Acc:P18754]
16.6254 -22.91 3.32313e-05 400 11 2 14 [+] picture button
GRWD1 SINFRUT00000129211 Glutamate-rich WD repeat-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9BQ67]
16.4052 -22.04 3.70078e-05 400 5 1 6 [+] picture button
MOBKL2C SINFRUT00000176968 Mps one binder kinase activator-like 2C (Mob1 homolog 2C) (Protein Mob3C). [Source:Uniprot/SWISSPROT;Acc:Q70IA8]
16.327 -12.28 4.71556e-05 400 4 2 5 [+] picture button
SNX17 SINFRUT00000139753 Sorting nexin-17. [Source:Uniprot/SWISSPROT;Acc:Q15036]
18.6072 -24.89 5.27138e-05 400 5 4 6 [+] picture button
MAP3K10 SINFRUT00000131433 Mitogen-activated protein kinase kinase kinase 10 (EC 2.7.11.25) (Mixed lineage kinase 2) (Protein kinase MST). [Source:Uniprot/SWISSPROT;Acc:Q02779]
16.4888 -20.35 5.68607e-05 400 5 4 7 [+] picture button
SDSL SINFRUT00000144526 Serine dehydratase-like (EC 4.3.1.-) (Serine dehydratase 2). [Source:Uniprot/SWISSPROT;Acc:Q96GA7]
17.1759 -24.48 5.69333e-05 400 3 2 5 [+] picture button
ZNF364 (1 of 2) SINFRUT00000131471 Zinc finger protein 364 (Rabring 7) (RING finger protein 115). [Source:Uniprot/SWISSPROT;Acc:Q9Y4L5]
18.3594 -24.63 5.76044e-05 400 3 2 5 [+] picture button
NP_001027753.1 SINFRUT00000183443 adrenomedullin-1 [Source:RefSeq_peptide;Acc:NP_001027753]
16.7728 -17.85 5.94294e-05 400 7 3 7 [+] picture button
SLC13A2 SINFRUT00000181543 Solute carrier family 13 member 2 (Renal sodium/dicarboxylate cotransporter) (Na(+)/dicarboxylate cotransporter 1) (NaDC-1). [Source:Uniprot/SWISSPROT;Acc:Q13183]
16.0749 -26.4 6.02037e-05 400 7 1 8 [+] picture button
SINFRUT00000168535 Homolog of Brachydanio rerio "HDCMA18P protein. [Source:Uniprot/SPTREMBL;Acc:Q7ZWE3]"
17.3961 -25.19 6.11522e-05 400 5 1 4 [+] picture button
TRPM2 SINFRUT00000145321 Transient receptor potential cation channel subfamily M member 2 (EC 3.6.1.13) (Long transient receptor potential channel 2) (LTrpC2) (LTrpC-2) (Transient receptor potential channel 7) (TrpC7) (Estrogen- responsive element-associated gene 1 protein). [Source:Uniprot/SWISSPROT;Acc:O94759]
15.9648 -12.99 6.52795e-05 400 5 1 5 [+] picture button
C9orf86 SINFRUT00000179226 Putative GTP-binding protein Parf (Partner of ARF). [Source:Uniprot/SWISSPROT;Acc:Q3YEC7]
16.5153 -17.68 6.55307e-05 400 8 4 10 [+] picture button
ERAL1 SINFRUT00000146179 GTP-binding protein era homolog (hERA) (ERA-W) (Conserved ERA-like GTPase) (CEGA). [Source:Uniprot/SWISSPROT;Acc:O75616]
17.1086 -21.16 6.88159e-05 400 3 2 6 [+] picture button
RAPSN SINFRUT00000149810 43 kDa receptor-associated protein of the synapse (RAPsyn) (Acetylcholine receptor-associated 43 kDa protein) (43 kDa postsynaptic protein) (RING finger protein 205). [Source:Uniprot/SWISSPROT;Acc:Q13702]
16.221 -18.26 6.93094e-05 400 5 1 6 [+] picture button
COQ4 SINFRUT00000130894 Ubiquinone biosynthesis protein COQ4 homolog (Coenzyme Q biosynthesis protein 4 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y3A0]
16.5153 -18.95 7.05184e-05 400 6 2 7 [+] picture button
TAF6L SINFRUT00000147414 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65 alpha) (PAF65- alpha). [Source:Uniprot/SWISSPROT;Acc:Q9Y6J9]
18.6072 -22.08 7.12593e-05 400 10 3 11 [+] picture button
TSPAN33 SINFRUT00000141337 Tetraspanin-33 (Tspan-33) (Proerythroblast new membrane) (Penumbra) (hPen). [Source:Uniprot/SWISSPROT;Acc:Q86UF1]
18.0567 -26.78 7.37125e-05 400 4 2 5 [+] picture button
RANBP5 SINFRUT00000165332 Importin beta-3 (Karyopherin beta-3) (Ran-binding protein 5) (RanBP5). [Source:Uniprot/SWISSPROT;Acc:O00410]
16.7052 -20.6 7.5696e-05 400 4 4 7 [+] picture button
DAB1 (2 of 2) SINFRUT00000130113 Disabled homolog 1. [Source:Uniprot/SWISSPROT;Acc:O75553]
16.7355 -19.66 7.86964e-05 400 5 1 3 [+] picture button
Q90WL7_FUGRU SINFRUT00000156777 Alpha galactosidase a. [Source:Uniprot/SPTREMBL;Acc:Q90WL7]
18.387 -21.85 7.92133e-05 400 5 1 7 [+] picture button
TMEM183B SINFRUT00000128614 Transmembrane protein 183A. [Source:Uniprot/SWISSPROT;Acc:Q8IXX5]
16.185 -17.69 8.1358e-05 400 3 2 3 [+] picture button
RASL10A SINFRUT00000155151 Ras-like protein family 10 member A precursor (Ras-like protein RRP22) (RAS-related protein on chromosome 22). [Source:Uniprot/SWISSPROT;Acc:Q92737]
18.0567 -25.28 8.23256e-05 400 5 3 6 [+] picture button
DIP2B (1 of 2) SINFRUT00000169119 DIP2 disco-interacting protein 2 homolog B [Source:RefSeq_peptide;Acc:NP_775873]
16.6237 -17.07 8.34072e-05 400 5 4 7 [+] picture button
SINFRUT00000143774 Homolog of Homo sapiens "Rho GTPase activating protein 24 [Source:UniGene;Acc:Hs.444229]"
17.2584 -20.36 8.48287e-05 400 6 2 5 [+] picture button
CRYM SINFRUT00000128990 Mu-crystallin homolog (NADP-regulated thyroid-hormone-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q14894]
17.0973 -16.98 8.49999e-05 400 7 2 8 [+] picture button
CARD10 SINFRUT00000160860 Caspase recruitment domain-containing protein 10 (CARD-containing MAGUK protein 3) (Carma 3). [Source:Uniprot/SWISSPROT;Acc:Q9BWT7]
16.0554 -15.52 9.58864e-05 400 7 2 9 [+] picture button
LFNG (1 of 2) SINFRUT00000138152 Beta-1,3-N-acetylglucosaminyltransferase lunatic fringe (EC 2.4.1.222) (O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q8NES3]
16.5153 -15.04 0.000100102 400 4 2 6 [+] picture button
Q5SRD2_HUMAN SINFRUT00000155772 Translocase of inner mitochondrial membrane 23 homolog B (Yeast) (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5SRD2]
17.6163 -22.51 0.000100188 400 4 1 5 [+] picture button
SLC24A3 (2 of 2) SINFRUT00000172731 Sodium/potassium/calcium exchanger 3 precursor (Na(+)/K(+)/Ca(2+)- exchange protein 3) (Solute carrier family 24 member 3). [Source:Uniprot/SWISSPROT;Acc:Q9HC58]
15.9648 -21.68 0.000105183 400 7 1 8 [+] picture button

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Download table: GFF TXT
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