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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-23a

769 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SINFRUT00000181130 Homolog of Morone saxatilis "MHC class II protein. [Source:Uniprot/SPTREMBL;Acc:Q31462]"
16.9744 -14.4 0.000001 400 8 1 11 [+] picture button
JMJD1C SINFRUT00000140778 Probable JmjC domain-containing histone demethylation protein 2C (EC 1.14.11.-) (Jumonji domain-containing protein 1C) (Thyroid receptor-interacting protein 8) (TRIP-8). [Source:Uniprot/SWISSPROT;Acc:Q15652]
18.0121 -15.4 0.00000103138 400 4 1 4 [+] picture button
MAB21L2 SINFRUT00000129836 mab-21-like protein 2 [Source:RefSeq_peptide;Acc:NP_006430]
17.3741 -16.78 0.00000200968 400 6 6 10 [+] picture button
G3BP2 SINFRUT00000176363 Ras GTPase-activating protein-binding protein 2 (G3BP-2) (GAP SH3 domain-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UN86]
16.8456 -16.57 0.00000203553 400 6 9 8 [+] picture button
FAM120B SINFRUT00000158914 PPARgamma constitutive coactivator 1 [Source:RefSeq_peptide;Acc:NP_115824]
18.1668 -16.13 0.00000219433 400 5 2 6 [+] picture button
FLNC SINFRUT00000181322 Filamin-C (Gamma-filamin) (Filamin-2) (Protein FLNc) (Actin-binding- like protein) (ABP-L) (ABP-280-like protein). [Source:Uniprot/SWISSPROT;Acc:Q14315]
16.4052 -17.13 0.00000283744 400 7 2 9 [+] picture button
MON1B SINFRUT00000127380 MON1 homolog B [Source:RefSeq_peptide;Acc:NP_055755]
16.5756 -20.57 0.00000387962 400 5 2 5 [+] picture button
NP_689704.3 SINFRUT00000162989 CDNA FLJ32569 fis, clone SPLEN2000134, weakly similar to CARBOXYPEPTIDASE S (EC 3.4.17.4). [Source:Uniprot/SPTREMBL;Acc:Q96DM4]
17.286 -16.59 0.00000418828 400 7 2 10 [+] picture button
HOXA3 SINFRUT00000159071 Homeobox protein Hox-A3 (Hox-1E). [Source:Uniprot/SWISSPROT;Acc:O43365]
16.1947 -11.18 0.00000484975 400 4 9 6 [+] picture button
RXRG SINFRUT00000130029 Retinoic acid receptor RXR-gamma (Retinoid X receptor gamma). [Source:Uniprot/SWISSPROT;Acc:P48443]
16.5153 -8.58 0.00000556462 400 7 2 10 [+] picture button
TMEM93 SINFRUT00000146174 Transmembrane protein 93. [Source:Uniprot/SWISSPROT;Acc:Q9BV81]
16.3314 -16.34 0.00000587686 400 5 1 5 [+] picture button
POU4F2 SINFRUT00000178548 POU domain, class 4, transcription factor 2 (Brain-specific homeobox/POU domain protein 3B) (Brn-3B). [Source:Uniprot/SWISSPROT;Acc:Q12837]
16.6835 -10.52 0.0000116563 400 4 3 4 [+] picture button
Q9UJN8_HUMAN SINFRUT00000150239 OTTHUMP00000016179 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UJN8]
16.4052 -18.82 0.0000145801 400 7 1 8 [+] picture button
VRK3 SINFRUT00000156545 Serine/threonine-protein kinase VRK3 (EC 2.7.11.1) (Vaccinia-related kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q8IV63]
16.4052 -11.4 0.0000152566 400 6 2 7 [+] picture button
PIK3R3 (1 of 2) SINFRUT00000174981 Phosphatidylinositol 3-kinase regulatory subunit gamma (PI3-kinase p85-subunit gamma) (PtdIns-3-kinase p85-gamma) (p55PIK). [Source:Uniprot/SWISSPROT;Acc:Q92569]
18.1925 -12.33 0.0000189815 400 4 5 5 [+] picture button
TNFAIP6 SINFRUT00000157450 Tumor necrosis factor-inducible protein TSG-6 precursor (TNF- stimulated gene 6 protein) (Hyaluronate-binding protein). [Source:Uniprot/SWISSPROT;Acc:P98066]
16.4052 -12.43 0.0000223954 400 6 2 7 [+] picture button
KIAA0423 SINFRUT00000145061 Uncharacterized protein KIAA0423. [Source:Uniprot/SWISSPROT;Acc:Q9Y4F4]
17.286 -19.54 0.0000224662 400 6 1 8 [+] picture button
UBE2D1 SINFRUT00000152871 Ubiquitin-conjugating enzyme E2 D1 (EC 6.3.2.19) (Ubiquitin-protein ligase D1) (Ubiquitin carrier protein D1) (UbcH5) (Ubiquitin- conjugating enzyme E2-17 kDa 1) (E2(17)KB 1). [Source:Uniprot/SWISSPROT;Acc:P51668]
16.642 -11.05 0.000024108 400 7 1 6 [+] picture button
M3KL4_HUMAN SINFRUT00000145965 Mitogen-activated protein kinase kinase kinase (EC 2.7.11.25) (Mixed lineage kinase 4). [Source:Uniprot/SWISSPROT;Acc:Q5TCX8]
16.1273 -10.29 0.0000317536 400 5 3 3 [+] picture button
ZMYM2 SINFRUT00000158710 MYM-type zinc finger protein 2 (Zinc finger protein 198) (Fused in myeloproliferative disorders protein) (Rearranged in atypical myeloproliferative disorder protein). [Source:Uniprot/SWISSPROT;Acc:Q9UBW7]
18.1668 -19.04 0.0000321303 400 5 2 5 [+] picture button
FOXA1 SINFRUT00000139981 Hepatocyte nuclear factor 3-alpha (HNF-3A) (Forkhead box protein A1). [Source:Uniprot/SWISSPROT;Acc:P55317]
17.1761 -12.34 0.0000330715 400 4 2 5 [+] picture button
BTAF1 SINFRUT00000143763 TATA-binding protein-associated factor 172 (EC 3.6.1.-) (ATP-dependent helicase BTAF1) (TBP-associated factor 172) (TAF-172) (TAF(II)170) (B- TFIID transcription factor-associated 170 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O14981]
16.6285 -16.29 0.0000339264 400 6 2 9 [+] picture button
DPH5 SINFRUT00000177686 Probable diphthine synthase (EC 2.1.1.98) (Diphthamide biosynthesis methyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q9H2P9]
16.4792 -18.13 0.0000382328 400 7 3 9 [+] picture button
CYP51A1 SINFRUT00000135614 Cytochrome P450 51A1 (EC 1.14.13.70) (CYPLI) (P450LI) (Sterol 14-alpha demethylase) (Lanosterol 14-alpha demethylase) (LDM) (P450-14DM) (P45014DM). [Source:Uniprot/SWISSPROT;Acc:Q16850]
16.5153 -12.64 0.0000469313 400 3 3 4 [+] picture button
ZDHHC6 SINFRUT00000168395 Probable palmitoyltransferase ZDHHC6 (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 6) (DHHC-6) (Zinc finger protein 376) (Transmembrane protein H4). [Source:Uniprot/SWISSPROT;Acc:Q9H6R6]
17.6163 -21.93 0.0000561631 400 7 3 8 [+] picture button
RTF1 SINFRUT00000137300 RNA polymerase-associated protein RTF1 homolog. [Source:Uniprot/SWISSPROT;Acc:Q92541]
16.4423 -15.41 0.0000657209 400 5 3 8 [+] picture button
DAXX SINFRUT00000154843 Death domain-associated protein 6 (Daxx) (hDaxx) (Fas death domain- associated protein) (ETS1-associated protein 1) (EAP1). [Source:Uniprot/SWISSPROT;Acc:Q9UER7]
17.9466 -15.41 0.000068509 400 6 3 8 [+] picture button
FEM1B SINFRUT00000165485 fem-1 homolog b [Source:RefSeq_peptide;Acc:NP_056137]
16.5153 -14.23 0.0000707932 400 5 1 5 [+] picture button
DIS3L2 SINFRUT00000140976 DIS3 mitotic control homolog (S. cerevisiae)-like 2 [Source:RefSeq_peptide;Acc:NP_689596]
18.2769 -18.69 0.0000782229 400 6 2 13 [+] picture button
LASS6 SINFRUT00000148342 LAG1 longevity assurance homolog 6. [Source:Uniprot/SWISSPROT;Acc:Q6ZMG9]
16.4888 -19.49 0.0000809028 400 6 3 7 [+] picture button
NRCAM (1 of 2) SINFRUT00000182429 Neuronal cell adhesion molecule precursor (Nr-CAM) (NgCAM-related cell adhesion molecule) (Ng-CAM-related) (hBravo). [Source:Uniprot/SWISSPROT;Acc:Q92823]
17.7582 -22.01 0.0000830192 400 3 4 4 [+] picture button
TXNL5 SINFRUT00000162313 Thioredoxin-like protein 5 (14 kDa thioredoxin-related protein) (TRP14) (Protein 42-9-9). [Source:Uniprot/SWISSPROT;Acc:Q9BRA2]
17.286 -21.8 0.0000856379 400 4 1 6 [+] picture button
NP_001027732.1 SINFRUT00000159262 melanocortin receptor-1 [Source:RefSeq_peptide;Acc:NP_001027732]
17.286 -19.71 0.0000862169 400 3 5 9 [+] picture button
NUDC SINFRUT00000151052 Nuclear migration protein nudC (Nuclear distribution protein C homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y266]
17.3961 -18.25 0.0000863881 400 6 1 10 [+] picture button
Q6E5U1_FUGRU SINFRUT00000161105 Claudin 12. [Source:Uniprot/SPTREMBL;Acc:Q6E5U1]
17.0658 -22.03 0.0000877849 400 8 2 11 [+] picture button
MTF2 SINFRUT00000135609 Metal-response element-binding transcription factor 2 (Metal-response element DNA-binding protein M96) (Metal-regulatory transcription factor 2) (PCL2). [Source:Uniprot/SWISSPROT;Acc:Q9Y483]
17.7264 -17.31 0.0000883067 400 6 1 11 [+] picture button
HIGD2BP SINFRUT00000137215 HIG1 domain family, member 2B pseudogene (HIGD2BP) on chromosome 15 [Source:RefSeq_dna;Acc:NR_002780]
17.0658 -17.98 0.0000890579 400 3 1 3 [+] picture button
KIAA0562 SINFRUT00000161482 Uncharacterized protein KIAA0562. [Source:Uniprot/SWISSPROT;Acc:O60308]
18.2021 -20.83 0.0000933722 400 3 1 7 [+] picture button
QSOX1 SINFRUT00000164185 Sulfhydryl oxidase 1 precursor (EC 1.8.3.2) (Quiescin Q6) (hQSOX). [Source:Uniprot/SWISSPROT;Acc:O00391]
16.8456 -19.27 0.0000946229 400 6 3 8 [+] picture button
SINFRUT00000181824 Homolog of Homo sapiens "Transcription elongation factor B (SIII), polypeptide 1 (15kDa, elongin C) [Source:UniGene;Acc:Hs.546305]"
16.9557 -12.5 0.0000988401 400 4 4 4 [+] picture button
BCDIN3 SINFRUT00000177927 bin3, bicoid-interacting 3 [Source:RefSeq_peptide;Acc:NP_062552]
18.8747 -16.27 0.0000997132 116 3 2 4 [+] picture button
S100Z SINFRUT00000136497 Protein S100-Z (S100 calcium-binding protein Z). [Source:Uniprot/SWISSPROT;Acc:Q8WXG8]
16.7355 -15.24 0.000113296 400 5 2 7 [+] picture button
SRPX2 SINFRUT00000133054 Sushi repeat-containing protein SRPX2 precursor. [Source:Uniprot/SWISSPROT;Acc:O60687]
17.59 -12.77 0.000115131 400 6 2 8 [+] picture button
SEDLP SINFRUT00000134936 Trafficking protein particle complex subunit 2 (Sedlin) (MBP-1- interacting protein 2A) (MIP-2A). [Source:Uniprot/SWISSPROT;Acc:O14582]
17.0658 -11.86 0.000116219 400 5 1 5 [+] picture button
C20orf82 SINFRUT00000164493 Uncharacterized protein C20orf82 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9H599]
16.1521 -19.89 0.000119546 400 6 9 10 [+] picture button
HRH1 SINFRUT00000164084 Histamine H1 receptor. [Source:Uniprot/SWISSPROT;Acc:P35367]
16.3251 -15.56 0.000124109 400 5 1 5 [+] picture button
IKBKB SINFRUT00000178898 Inhibitor of nuclear factor kappa-B kinase subunit beta (EC 2.7.11.10) (I-kappa-B-kinase beta) (IkBKB) (IKK-beta) (IKK-B) (I-kappa-B kinase 2) (IKK2) (Nuclear factor NF-kappa-B inhibitor kinase beta) (NFKBIKB). [Source:Uniprot/SWISSPROT;Acc:O14920]
16.185 -18.37 0.000134819 400 4 1 8 [+] picture button
SLC7A6OS SINFRUT00000138438 solute carrier family 7, member 6 opposite strand [Source:RefSeq_peptide;Acc:NP_115554]
16.6285 -15.6 0.000135207 400 8 1 10 [+] picture button
CSE1L SINFRUT00000136811 Exportin-2 (Exp2) (Importin-alpha re-exporter) (Chromosome segregation 1-like protein) (Cellular apoptosis susceptibility protein). [Source:Uniprot/SWISSPROT;Acc:P55060]
17.3441 -13.85 0.000135233 400 4 5 8 [+] picture button
STAG1 SINFRUT00000137643 Cohesin subunit SA-1 (Stromal antigen 1) (SCC3 homolog 1). [Source:Uniprot/SWISSPROT;Acc:Q8WVM7]
16.185 -25.86 0.000147244 400 3 2 4 [+] picture button

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Download table: GFF TXT
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