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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-22a

814 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SMAP1 SINFRUT00000147143 Stromal membrane-associated protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8IYB5]
18.6473 -25.47 0.000000982633 400 7 4 7 [+] picture button
SNRPD3 SINFRUT00000141225 Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3). [Source:Uniprot/SWISSPROT;Acc:P62318]
15.691 -19.56 0.000001 400 8 1 5 [+] picture button
TRIM23 SINFRUT00000136541 GTP-binding protein ARD-1 (ADP-ribosylation factor domain protein 1) (Tripartite motif-containing protein 23) (RING finger protein 46). [Source:Uniprot/SWISSPROT;Acc:P36406]
15.5243 -14.4 0.00000126404 400 2 2 2 [+] picture button
TRIP6 SINFRUT00000158859 Thyroid receptor-interacting protein 6 (TRIP-6) (OPA-interacting protein 1) (Zyxin-related protein 1) (ZRP-1). [Source:Uniprot/SWISSPROT;Acc:Q15654]
16.9935 -16.15 0.00000138551 400 3 4 6 [+] picture button
SEPHS1 SINFRUT00000136241 Selenide, water dikinase 1 (EC 2.7.9.3) (Selenophosphate synthetase 1) (Selenium donor protein 1). [Source:Uniprot/SWISSPROT;Acc:P49903]
17.0658 -12.93 0.00000491449 400 4 3 6 [+] picture button
FKBP4 SINFRUT00000129987 FK506-binding protein 4 (EC 5.2.1.8) (Peptidyl-prolyl cis-trans isomerase) (PPIase) (Rotamase) (p59 protein) (HSP-binding immunophilin) (HBI) (FKBP52 protein) (52 kDa FK506-binding protein) (FKBP59). [Source:Uniprot/SWISSPROT;Acc:Q02790]
18.2769 -24.61 0.00000619125 400 6 3 9 [+] picture button
TTC35 SINFRUT00000146667 Tetratricopeptide repeat protein 35 (TPR repeat protein 35). [Source:Uniprot/SWISSPROT;Acc:Q15006]
16.185 -15.47 0.00000711499 400 6 4 8 [+] picture button
SACS SINFRUT00000167876 Sacsin. [Source:Uniprot/SWISSPROT;Acc:Q9NZJ4]
18.9375 -26.43 0.00000771866 400 7 5 11 [+] picture button
GATM SINFRUT00000161914 Glycine amidinotransferase, mitochondrial precursor (EC 2.1.4.1) (L- arginine:glycine amidinotransferase) (Transamidinase) (AT). [Source:Uniprot/SWISSPROT;Acc:P50440]
16.4052 -18.13 0.0000091986 400 3 2 7 [+] picture button
GFPT1 SINFRUT00000146913 Glucosamine--fructose-6-phosphate aminotransferase [isomerizing] 1 (EC 2.6.1.16) (Hexosephosphate aminotransferase 1) (D-fructose-6- phosphate amidotransferase 1) (GFAT 1) (GFAT1). [Source:Uniprot/SWISSPROT;Acc:Q06210]
16.7728 -16.02 0.00000934206 400 3 3 4 [+] picture button
HDAC8 SINFRUT00000143211 Histone deacetylase 8 (HD8). [Source:Uniprot/SWISSPROT;Acc:Q9BY41]
16.0695 -19.74 0.0000113237 400 5 2 5 [+] picture button
SGK SINFRUT00000130450 Serine/threonine-protein kinase Sgk1 (EC 2.7.11.1) (Serum/glucocorticoid-regulated kinase 1). [Source:Uniprot/SWISSPROT;Acc:O00141]
16.5153 -18.69 0.0000122208 400 4 3 5 [+] picture button
FAM49B SINFRUT00000142542 Protein FAM49B (L1). [Source:Uniprot/SWISSPROT;Acc:Q9NUQ9]
16.3056 -14.75 0.0000228783 400 5 7 5 [+] picture button
EMILIN3 (2 of 2) SINFRUT00000155650 EMILIN-3 precursor (EMILIN-5) (Elastin microfibril interface-located protein 5) (Elastin microfibril interfacer 5). [Source:Uniprot/SWISSPROT;Acc:Q9NT22]
15.8666 -20.76 0.0000242717 400 7 4 10 [+] picture button
ATF6 SINFRUT00000130030 Cyclic AMP-dependent transcription factor ATF-6 alpha (Activating transcription factor 6 alpha) (ATF6-alpha). [Source:Uniprot/SWISSPROT;Acc:P18850]
17.5062 -15.48 0.0000282426 400 3 2 4 [+] picture button
SMO SINFRUT00000183050 Smoothened homolog precursor (SMO) (Gx protein). [Source:Uniprot/SWISSPROT;Acc:Q99835]
16.185 -15.39 0.0000320131 400 8 3 9 [+] picture button
NP_001073910.1 SINFRUT00000151390 similar to CDNA sequence BC021608 (LOC143941), mRNA [Source:RefSeq_dna;Acc:NM_001080441]
17.6163 -17.47 0.0000348619 400 3 1 4 [+] picture button
B3GNT2 (1 of 2) SINFRUT00000143199 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 (EC 2.4.1.-) (Beta3Gn-T1) (BGnT-1) (Beta-1,3-galactosyltransferase 7) (Beta-1,3-GalTase 7) (Beta3Gal-T7) (b3Gal-T7) (UDP-galactose:beta-N- acetylglucosamine beta-1,3-galactosyltransferase 7) (U [Source:Uniprot/SWISSPROT;Acc:Q9NY97]
16.4052 -16.02 0.0000612553 400 8 2 8 [+] picture button
DOCK7 SINFRUT00000150869 Dedicator of cytokinesis protein 7. [Source:Uniprot/SWISSPROT;Acc:Q96N67]
15.576 -12.45 0.0000626661 400 6 2 6 [+] picture button
EMX2 SINFRUT00000139710 Homeobox protein EMX2 (Empty spiracles homolog 2) (Empty spiracles- like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q04743]
17.6277 -21.92 0.0000705249 400 3 8 9 [+] picture button
ADRA1B (1 of 2) SINFRUT00000152462 Alpha-1B adrenergic receptor (Alpha 1B-adrenoceptor) (Alpha 1B- adrenoreceptor). [Source:Uniprot/SWISSPROT;Acc:P35368]
16.0749 -17.41 0.0000743422 400 6 2 8 [+] picture button
MFSD9 SINFRUT00000163810 major facilitator superfamily domain containing 9 [Source:RefSeq_peptide;Acc:NP_116107]
16.7355 -15.19 0.0000767087 400 5 2 5 [+] picture button
SINFRUT00000146991 Homolog of Cyprinus carpio "Transthyretin (Putative thyroid hormone carrier). [Source:Uniprot/SPTREMBL;Acc:Q7T1P3]"
15.5243 -14.9 0.0000785401 400 3 3 4 [+] picture button
TADA1L SINFRUT00000129061 SPT3-associated factor 42 [Source:RefSeq_peptide;Acc:NP_444281]
15.7797 -17.76 0.0000839696 400 3 2 3 [+] picture button
PPYR1 (2 of 3) SINFRUT00000168562 Neuropeptide Y receptor type 4 (NPY4-R) (Pancreatic polypeptide receptor 1) (PP1). [Source:Uniprot/SWISSPROT;Acc:P50391]
16.4052 -16.14 0.0000917705 400 3 1 3 [+] picture button
CIDEC SINFRUT00000138701 Cell death activator CIDE-3 (Cell death-inducing DFFA-like effector protein C) (Fat-specific protein FSP27 homolog). [Source:Uniprot/SWISSPROT;Acc:Q96AQ7]
15.89 -16.25 0.0000952983 400 6 4 7 [+] picture button
DHX9 SINFRUT00000134524 ATP-dependent RNA helicase A (EC 3.6.1.-) (Nuclear DNA helicase II) (NDH II) (DEAH box protein 9). [Source:Uniprot/SWISSPROT;Acc:Q08211]
17.9651 -21.49 0.0000965593 400 5 1 4 [+] picture button
NP_659416.1 SINFRUT00000158463 Homolog of Brachydanio rerio "Synaptotagmin binding, cytoplasmic RNA interacting protein. [Source:Uniprot/SPTREMBL;Acc:Q6NUZ3]"
15.6543 -19.26 0.000108437 400 7 3 10 [+] picture button
FVT1 SINFRUT00000165182 3-ketodihydrosphingosine reductase precursor (EC 1.1.1.102) (3- dehydrosphinganine reductase) (KDS reductase) (Follicular variant translocation protein 1) (FVT-1). [Source:Uniprot/SWISSPROT;Acc:Q06136]
16.8106 -20.09 0.000108587 400 6 3 6 [+] picture button
RAI2 SINFRUT00000174260 Retinoic acid-induced protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9Y5P3]
17.5414 -15.56 0.000110285 400 7 2 13 [+] picture button
Q6KC01_FUGRU SINFRUT00000128496 Alpha-2,8-sialyltransferase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q50J40]
17.5062 -19.2 0.000138483 400 4 2 5 [+] picture button
C20orf159 (1 of 2) SINFRUT00000130306 XK-related protein 7. [Source:Uniprot/SWISSPROT;Acc:Q5GH72]
17.0658 -14.37 0.000148033 400 5 2 7 [+] picture button
UBAC1 SINFRUT00000134423 Ubiquitin-associated domain-containing protein 1 (E3 ubiquitin-protein ligase subunit KPC2) (Kip1 ubiquitination-promoting complex protein 2) (Glialblastoma cell differentiation-related protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BSL1]
16.9267 -16.14 0.000157935 400 5 9 8 [+] picture button
CCNG2 (2 of 2) SINFRUT00000162732 Cyclin-G2. [Source:Uniprot/SWISSPROT;Acc:Q16589]
16.3851 -13.77 0.000179174 400 7 2 13 [+] picture button
SAT2 SINFRUT00000134322 Diamine acetyltransferase 2 (EC 2.3.1.57) (Spermidine/spermine N(1)- acetyltransferase 2) (Polyamine N-acetyltransferase 2). [Source:Uniprot/SWISSPROT;Acc:Q96F10]
16.185 -17.18 0.000185817 400 4 1 5 [+] picture button
MRPL15 SINFRUT00000142497 39S ribosomal protein L15, mitochondrial precursor (L15mt) (MRP-L15). [Source:Uniprot/SWISSPROT;Acc:Q9P015]
16.2951 -13.75 0.000196685 400 5 3 5 [+] picture button
SINFRUT00000183630 Homolog of Homo sapiens "PQ loop repeat containing 1 [Source:IPI;Acc:IPI00181586]"
18.387 -17.47 0.000223244 400 7 2 12 [+] picture button
ATP9A SINFRUT00000166896 Probable phospholipid-transporting ATPase IIA (EC 3.6.3.1) (ATPase class II type 9A) (ATPase IIA). [Source:Uniprot/SWISSPROT;Acc:O75110]
16.9557 -13.72 0.000229016 400 6 2 10 [+] picture button
NP_060000.1 SINFRUT00000129503 Homolog of Gallus gallus "Transcription factor RREB-1. [Source:Uniprot/SPTREMBL;Acc:O57415]"
16.9762 -14.61 0.000229855 400 5 2 7 [+] picture button
MCM9 SINFRUT00000142137 minichromosome maintenance protein domain containing 1 [Source:RefSeq_peptide;Acc:NP_694987]
18.8624 -18.82 0.000236861 400 4 1 7 [+] picture button
RNF166 SINFRUT00000165480 RING finger protein 166. [Source:Uniprot/SWISSPROT;Acc:Q96A37]
16.0749 -16.76 0.000239663 400 5 1 7 [+] picture button
SINFRUT00000182226 Homolog of Homo sapiens "Mucin 2 precursor [Source:IPI;Acc:IPI00027201]"
17.9466 -19.25 0.000242226 400 4 1 6 [+] picture button
AMFR SINFRUT00000159671 Autocrine motility factor receptor, isoform 2 (EC 6.3.2.-) (AMF receptor) (gp78). [Source:Uniprot/SWISSPROT;Acc:Q9UKV5]
16.5153 -19.05 0.000246704 400 4 1 4 [+] picture button
CCL25 (2 of 2) SINFRUT00000171004 Small inducible cytokine A25 precursor (CCL25) (Chemokine TECK) (Thymus-expressed chemokine). [Source:Uniprot/SWISSPROT;Acc:O15444]
16.2951 -17.62 0.000247954 400 5 3 7 [+] picture button
BTG1 SINFRUT00000181408 BTG1 protein (B-cell translocation gene 1 protein). [Source:Uniprot/SWISSPROT;Acc:P62324]
16.1813 -14.15 0.000251188 400 6 4 5 [+] picture button
VEZT SINFRUT00000129937 Vezatin. [Source:Uniprot/SWISSPROT;Acc:Q9HBM0]
15.7793 -20.1 0.000258157 400 6 2 7 [+] picture button
NP_060401.2 SINFRUT00000134063 OTTHUMP00000028646. [Source:Uniprot/SPTREMBL;Acc:Q5R3I4]
16.0838 -17.58 0.000260406 400 1 1 1 [+] picture button
AMT SINFRUT00000174488 Aminomethyltransferase, mitochondrial precursor (EC 2.1.2.10) (Glycine cleavage system T protein) (GCVT). [Source:Uniprot/SWISSPROT;Acc:P48728]
16.5153 -17.62 0.000265243 400 4 2 5 [+] picture button
HISPPD2A (1 of 2) SINFRUT00000174380 Histidine acid phosphatase domain containing 2A isoform 2 [Source:RefSeq_peptide;Acc:NP_055474]
16.185 -18.44 0.000273935 400 3 1 3 [+] picture button
HPS1 SINFRUT00000146520 Hermansky-Pudlak syndrome 1 protein. [Source:Uniprot/SWISSPROT;Acc:Q92902]
15.5243 -16.3 0.000289745 400 5 1 7 [+] picture button

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Download table: GFF TXT
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