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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-21

787 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PDCD4 SINFRUT00000127227 Programmed cell death protein 4 (Nuclear antigen H731-like) (Neoplastic transformation inhibitor protein) (Protein 197/15a). [Source:Uniprot/SWISSPROT;Acc:Q53EL6]
16.9153 -12.88 1.06798e-08 400 6 11 9 [+] picture button
WWP1 SINFRUT00000150104 NEDD4-like E3 ubiquitin-protein ligase WWP1 (EC 6.3.2.-) (WW domain- containing protein 1) (Atropin-1-interacting protein 5) (AIP5). [Source:Uniprot/SWISSPROT;Acc:Q9H0M0]
17.64 -17.13 3.65059e-08 400 5 11 7 [+] picture button
KIAA1411 SINFRUT00000129326 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]
16.1587 -21.22 3.32294e-06 400 5 4 6 [+] picture button
P2RY1 SINFRUT00000138058 P2Y purinoceptor 1 (ATP receptor) (P2Y1) (Purinergic receptor). [Source:Uniprot/SWISSPROT;Acc:P47900]
17.2018 -21.2 9.24676e-06 400 5 4 9 [+] picture button
C11orf46 SINFRUT00000136828 Uncharacterized protein C11orf46. [Source:Uniprot/SWISSPROT;Acc:Q8N8R7]
16.24 -11.98 1.08879e-05 400 8 1 10 [+] picture button
TCP1 SINFRUT00000152838 T-complex protein 1 subunit alpha (TCP-1-alpha) (CCT-alpha). [Source:Uniprot/SWISSPROT;Acc:P17987]
15.6679 -17.17 1.13219e-05 400 2 3 6 [+] picture button
RAB40C (1 of 2) SINFRUT00000181465 Ras-related protein Rab-40C (SOCS box-containing protein RAR3) (Rar- like protein). [Source:Uniprot/SWISSPROT;Acc:Q96S21]
17.789 -17.48 1.14771e-05 400 2 2 2 [+] picture button
UNG SINFRUT00000155102 Uracil-DNA glycosylase (EC 3.2.2.-) (UDG). [Source:Uniprot/SWISSPROT;Acc:P13051]
16.6427 -14.77 1.30434e-05 400 8 2 13 [+] picture button
SKI (2 of 2) SINFRUT00000127395 Ski oncogene (C-ski). [Source:Uniprot/SWISSPROT;Acc:P12755]
17.2018 -11.61 1.46616e-05 400 6 4 7 [+] picture button
PSPC1 SINFRUT00000139841 paraspeckle protein 1 [Source:RefSeq_peptide;Acc:NP_001035879]
16.5444 -18.32 2.21105e-05 400 5 2 11 [+] picture button
ZBTB2 SINFRUT00000172034 Zinc finger and BTB domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N680]
15.8483 -12.32 2.29336e-05 400 2 2 2 [+] picture button
C22orf25 SINFRUT00000163494 Uncharacterized protein C22orf25. [Source:Uniprot/SWISSPROT;Acc:Q6ICL3]
18.9548 -16.44 2.53038e-05 400 4 2 5 [+] picture button
O73635_FUGRU SINFRUT00000159420 Calcium2+ sensing receptor. [Source:Uniprot/SPTREMBL;Acc:O73635]
16.1061 -12.16 2.76202e-05 400 6 2 6 [+] picture button
O93321_FUGRU SINFRUT00000158604 All-1 related protein. [Source:Uniprot/SPTREMBL;Acc:O93321]
17.2018 -19.19 2.84175e-05 400 4 5 4 [+] picture button
PIGK SINFRUT00000178901 GPI-anchor transamidase precursor (EC 3.-.-.-) (GPI transamidase) (Phosphatidylinositol-glycan biosynthesis class K protein) (PIG-K) (hGPI8). [Source:Uniprot/SWISSPROT;Acc:Q92643]
15.9966 -11.39 3.12574e-05 400 7 3 9 [+] picture button
CDK7 SINFRUT00000151161 Cell division protein kinase 7 (EC 2.7.11.22) (EC 2.7.11.23) (CDK- activating kinase) (CAK) (TFIIH basal transcription factor complex kinase subunit) (39 kDa protein kinase) (P39 Mo15) (STK1) (CAK1). [Source:Uniprot/SWISSPROT;Acc:P50613]
17.0688 -19.18 3.2648e-05 400 6 1 8 [+] picture button
DTWD1 SINFRUT00000133029 DTW domain containing 1 [Source:RefSeq_peptide;Acc:NP_064619]
17.9687 -23.22 3.2648e-05 400 8 1 16 [+] picture button
TUBD1 SINFRUT00000177077 Tubulin delta chain (Delta tubulin). [Source:Uniprot/SWISSPROT;Acc:Q9UJT1]
24.1044 -44.86 4.65522e-05 400 4 2 5 [+] picture button
TM7SF4 SINFRUT00000130745 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
16.7635 -24.34 4.68101e-05 400 8 3 10 [+] picture button
CABLES2 (1 of 2) SINFRUT00000130303 CDK5 and ABL1 enzyme substrate 2 (Interactor with CDK3 2) (Ik3-2). [Source:Uniprot/SWISSPROT;Acc:Q9BTV7]
18.1256 -21.17 5.8719e-05 400 2 3 2 [+] picture button
GIPC3 SINFRUT00000152571 PDZ domain-containing protein GIPC3. [Source:Uniprot/SWISSPROT;Acc:Q8TF64]
18.2974 -16.42 6.12882e-05 400 5 2 8 [+] picture button
ZDHHC13 SINFRUT00000145722 Probable palmitoyltransferase ZDHHC13 (EC 2.3.1.-) (Zinc finger DHHC domain-containing protein 13) (DHHC-13) (Huntingtin-interacting protein 14-related protein) (HIP14-related protein) (Huntingtin- interacting protein HIP3RP) (Putative NF-kappa-B-activati [Source:Uniprot/SWISSPROT;Acc:Q8IUH4]
16.5904 -13.98 6.39218e-05 400 6 5 6 [+] picture button
C6orf105 SINFRUT00000135635 Uncharacterized protein C6orf105. [Source:Uniprot/SWISSPROT;Acc:Q96IZ2]
15.7774 -28.9 6.40546e-05 400 5 2 5 [+] picture button
LRRC42 SINFRUT00000143268 Leucine-rich repeat-containing protein 42. [Source:Uniprot/SWISSPROT;Acc:Q9Y546]
17.2018 -19.96 6.72523e-05 400 4 2 4 [+] picture button
TUBB1 SINFRUT00000129205 Tubulin beta-1 chain. [Source:Uniprot/SWISSPROT;Acc:Q9H4B7]
16.2792 -9.85 6.95034e-05 400 7 2 10 [+] picture button
SECISBP2 SINFRUT00000156483 SECIS-binding protein 2 (Selenocysteine insertion sequence-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q96T21]
15.7203 -14.41 7.26979e-05 400 5 1 8 [+] picture button
SINFRUT00000175756 Homolog of Homo sapiens "ATP-binding cassette, sub-family G, member 2 [Source:IPI;Acc:IPI00298214]"
18.5166 -23.02 7.45779e-05 400 6 3 11 [+] picture button
LGR4 SINFRUT00000171796 Leucine-rich repeat-containing G-protein coupled receptor 4 precursor (G-protein coupled receptor 48). [Source:Uniprot/SWISSPROT;Acc:Q9BXB1]
16.8731 -11.37 7.77655e-05 400 6 4 8 [+] picture button
EGFR (1 of 2) SINFRUT00000137059 Epidermal growth factor receptor precursor (EC 2.7.10.1) (Receptor tyrosine-protein kinase ErbB-1). [Source:Uniprot/SWISSPROT;Acc:P00533]
15.9966 -11.29 7.83248e-05 400 6 2 8 [+] picture button
FARP2 SINFRUT00000137343 FERM, RhoGEF and pleckstrin domain-containing protein 2 (FERM domain including RhoGEF) (FIR). [Source:Uniprot/SWISSPROT;Acc:O94887]
16.9827 -26.46 8.03947e-05 400 6 2 5 [+] picture button
WISP3 SINFRUT00000142301 WNT1-inducible-signaling pathway protein 3 precursor (WISP-3). [Source:Uniprot/SWISSPROT;Acc:O95389]
18.2385 -20.74 8.98439e-05 400 3 2 7 [+] picture button
ATAD2 SINFRUT00000152287 ATPase family AAA domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6PL18]
18.1964 -20.91 9.9663e-05 400 7 2 8 [+] picture button
ARPC1B SINFRUT00000155695 Actin-related protein 2/3 complex subunit 1B (ARP2/3 complex 41 kDa subunit) (p41-ARC). [Source:Uniprot/SWISSPROT;Acc:O15143]
17.0688 -19.35 0.000101665 400 8 3 9 [+] picture button
CDKL5 (2 of 2) SINFRUT00000161964 Cyclin-dependent kinase-like 5 (EC 2.7.11.22) (Serine/threonine- protein kinase 9). [Source:Uniprot/SWISSPROT;Acc:O76039]
16.2608 -17.78 0.000105271 400 6 3 10 [+] picture button
SEMA3A (2 of 2) SINFRUT00000177014 Semaphorin-3A precursor (Semaphorin III) (Sema III). [Source:Uniprot/SWISSPROT;Acc:Q14563]
16.7635 -16.08 0.000117783 400 6 3 5 [+] picture button
NP_598375.2 SINFRUT00000153858 DNA helicase HEL308 [Source:RefSeq_peptide;Acc:NP_598375]
16.5444 -16.72 0.000117813 400 7 2 12 [+] picture button
FUNDC1 SINFRUT00000134151 FUN14 domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8IVP5]
16.4348 -16.58 0.000125044 400 7 2 9 [+] picture button
MYEOV2 (1 of 2) SINFRUT00000183020 myeloma overexpressed 2 (MYEOV2), mRNA [Source:RefSeq_dna;Acc:NM_138336]
16.4713 -16.04 0.000125047 400 6 2 4 [+] picture button
Q7T1T8_FUGRU SINFRUT00000144852 Tmc5 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7T1T8]
16.5444 -14.56 0.00012589 400 3 2 4 [+] picture button
Q800B1_FUGRU SINFRUT00000146594 JunDLa. [Source:Uniprot/SPTREMBL;Acc:Q800B1]
17.4743 -17.76 0.000137276 400 4 3 5 [+] picture button
DUSP4 SINFRUT00000138444 Dual specificity protein phosphatase 4 (EC 3.1.3.48) (EC 3.1.3.16) (Mitogen-activated protein kinase phosphatase 2) (MAP kinase phosphatase 2) (MKP-2) (Dual specificity protein phosphatase hVH2). [Source:Uniprot/SWISSPROT;Acc:Q13115]
17.1129 -17.7 0.000142331 400 4 4 6 [+] picture button
HHIP SINFRUT00000133748 Hedgehog-interacting protein precursor (HHIP) (HIP). [Source:Uniprot/SWISSPROT;Acc:Q96QV1]
16.8025 -16.27 0.000149291 400 5 3 7 [+] picture button
SPRED2 (2 of 2) SINFRUT00000136213 Sprouty-related, EVH1 domain-containing protein 2 (Spred-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z698]
17.4042 -20.23 0.000160323 400 6 4 7 [+] picture button
BRMS1L (2 of 2) SINFRUT00000139565 breast cancer metastasis-suppressor 1-like [Source:RefSeq_peptide;Acc:NP_115728]
18.4277 -27.97 0.000175775 400 3 2 3 [+] picture button
SLC25A39 SINFRUT00000172782 Solute carrier family 25 member 39. [Source:Uniprot/SWISSPROT;Acc:Q9BZJ4]
18.6261 -18.24 0.00018471 400 5 2 8 [+] picture button
SLC13A2 SINFRUT00000181543 Solute carrier family 13 member 2 (Renal sodium/dicarboxylate cotransporter) (Na(+)/dicarboxylate cotransporter 1) (NaDC-1). [Source:Uniprot/SWISSPROT;Acc:Q13183]
16.2157 -12.08 0.000191372 400 7 1 8 [+] picture button
NP_001073947.1 SINFRUT00000181247 leucine-rich repeat-containing protein 14-like (LOC389257), mRNA [Source:RefSeq_dna;Acc:NM_001080478]
16.2157 -13.96 0.000191372 400 4 3 5 [+] picture button
C12orf29 SINFRUT00000142844 Uncharacterized protein C12orf29 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6PEK5]
16.2157 -20.74 0.000191372 400 6 1 8 [+] picture button
Q50J60_FUGRU SINFRUT00000146518 Alpha 2,3-sialyltransferase. [Source:Uniprot/SPTREMBL;Acc:Q5TIL2]
16.7635 -20.42 0.000191478 400 8 1 9 [+] picture button
FSTL1 (1 of 2) SINFRUT00000138205 Follistatin-related protein 1 precursor (Follistatin-like 1). [Source:Uniprot/SWISSPROT;Acc:Q12841]
17.5792 -12.58 0.000203414 400 5 1 8 [+] picture button

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Download table: GFF TXT
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