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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-196b

706 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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MYC SINFRUT00000142540 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.7394 -13.51 0.0000000204235 400 6 13 10 [+] picture button
RNF20 SINFRUT00000169230 E3 ubiquitin-protein ligase BRE1A (EC 6.3.2.-) (BRE1-A) (hBRE1) (RING finger protein 20). [Source:Uniprot/SWISSPROT;Acc:Q5VTR2]
16.2736 -12.49 0.0000000952302 400 7 2 13 [+] picture button
CDR1 SINFRUT00000180937 cerebellar degeneration-related protein 1, 34kDa [Source:RefSeq_peptide;Acc:NP_004056]
19.7082 -22.41 0.000001 400 10 1 5 [+] picture button
CPB2 SINFRUT00000145317 Carboxypeptidase B2 precursor (EC 3.4.17.20) (Carboxypeptidase U) (CPU) (Thrombin-activable fibrinolysis inhibitor) (TAFI) (Plasma carboxypeptidase B) (pCPB). [Source:Uniprot/SWISSPROT;Acc:Q96IY4]
16.2951 -16.73 0.00000613553 400 7 2 15 [+] picture button
GNPNAT1 SINFRUT00000159670 Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase). [Source:Uniprot/SWISSPROT;Acc:Q96EK6]
16.3734 -18.23 0.00000777778 400 6 2 13 [+] picture button
COL14A1 (2 of 2) SINFRUT00000153665 Collagen alpha-1(XIV) chain precursor (Undulin). [Source:Uniprot/SWISSPROT;Acc:Q05707]
16.6254 -14.79 0.00000844249 400 4 3 6 [+] picture button
C10orf119 SINFRUT00000177181 Uncharacterized protein C10orf119. [Source:Uniprot/SWISSPROT;Acc:Q9BTE3]
17.0658 -15.44 0.000009314 400 4 1 6 [+] picture button
ACAD8 SINFRUT00000171311 Acyl-CoA dehydrogenase family member 8, mitochondrial precursor (EC 1.3.99.-) (ACAD-8) (Isobutyryl-CoA dehydrogenase) (Activator- recruited cofactor 42 kDa component) (ARC42). [Source:Uniprot/SWISSPROT;Acc:Q9UKU7]
16.2951 -19.82 0.00000935224 400 6 2 7 [+] picture button
ODZ1 SINFRUT00000128209 Teneurin-1 (Ten-1) (Tenascin-M1) (Ten-m1) (Protein Odd Oz/ten-m homolog 1). [Source:Uniprot/SWISSPROT;Acc:Q9UKZ4]
15.9648 -20.75 0.0000109096 400 4 6 6 [+] picture button
VSNL1 (1 of 2) SINFRUT00000178590 Visinin-like protein 1 (VILIP) (Hippocalcin-like protein 3) (HLP3). [Source:Uniprot/SWISSPROT;Acc:P62760]
17.0262 -20.76 0.0000121726 400 3 9 4 [+] picture button
COL1A2 SINFRUT00000144114 Collagen alpha-2(I) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P08123]
18.6798 -12.97 0.0000124962 400 6 7 11 [+] picture button
TNNC1 SINFRUT00000135032 Troponin C, slow skeletal and cardiac muscles (TN-C). [Source:Uniprot/SWISSPROT;Acc:P63316]
18.0567 -17.97 0.000014058 400 4 3 5 [+] picture button
ZFPM1 SINFRUT00000180923 Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1). [Source:Uniprot/SWISSPROT;Acc:Q8IX07]
21.7021 -30.13 0.0000269095 400 5 2 10 [+] picture button
HOXA5 SINFRUT00000159074 Homeobox protein Hox-A5 (Hox-1C). [Source:Uniprot/SWISSPROT;Acc:P20719]
16.185 -16.8 0.0000343481 400 5 6 8 [+] picture button
KIAA2022 SINFRUT00000152396 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
18.9904 -18.39 0.0000433356 400 5 7 7 [+] picture button
NP_001014985.1 (1 of 2) SINFRUT00000141942 RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527]RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527] BY ORTHOLOGY TO:ENSMUST00000057685
18.2769 -24.26 0.0000462565 400 7 2 11 [+] picture button
NP_775830.1 SINFRUT00000134962 CDNA FLJ25791 fis, clone TST06952. [Source:Uniprot/SPTREMBL;Acc:Q8N7C6]
16.384 -16.85 0.0000477707 400 5 2 10 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
17.7264 -19.73 0.0000563586 400 4 2 7 [+] picture button
NP_001073985.1 SINFRUT00000169539 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.2238 -9.75 0.0000672894 400 4 1 5 [+] picture button
DUSP12 SINFRUT00000140226 Dual specificity protein phosphatase 12 (EC 3.1.3.48) (EC 3.1.3.16) (Dual specificity tyrosine phosphatase YVH1). [Source:Uniprot/SWISSPROT;Acc:Q9UNI6]
18.0567 -20.61 0.0000762349 400 4 3 9 [+] picture button
BRWD1 SINFRUT00000166671 Bromodomain and WD repeat domain-containing protein 1 (WD repeat protein 9). [Source:Uniprot/SWISSPROT;Acc:Q9NSI6]
16.0749 -13.16 0.0000863091 400 7 2 11 [+] picture button
SAR1A SINFRUT00000152512 GTP-binding protein SAR1a (COPII-associated small GTPase). [Source:Uniprot/SWISSPROT;Acc:Q9NR31]
16.7101 -14.55 0.00009376 400 4 2 8 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
16.185 -15.83 0.0000942763 400 4 1 6 [+] picture button
KLHL21 SINFRUT00000134297 Kelch-like protein 21. [Source:Uniprot/SWISSPROT;Acc:Q9UJP4]
16.0749 -19.83 0.000107707 400 6 2 7 [+] picture button
C12orf48 SINFRUT00000149514 UPF0419 protein C12orf48. [Source:Uniprot/SWISSPROT;Acc:Q9NWS1]
16.185 -14.99 0.000108394 400 8 2 16 [+] picture button
SERINC5 SINFRUT00000175634 developmentally regulated protein TPO1 [Source:RefSeq_peptide;Acc:NP_840060]
17.1828 -15.28 0.000110032 400 2 3 5 [+] picture button
SINFRUT00000171913 Homolog of Homo sapiens "Splice Isoform 1 of Friend leukemia integration 1 transcription factor [Source:IPI;Acc:IPI00329755]"
15.9648 -16.2 0.000112042 400 7 4 7 [+] picture button
PIGV SINFRUT00000153727 GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Phosphatidylinositol-glycan biosynthesis class V protein) (PIG-V). [Source:Uniprot/SWISSPROT;Acc:Q9NUD9]
16.5153 -16.22 0.000116249 400 8 3 14 [+] picture button
EPHA8 SINFRUT00000128814 Ephrin type-A receptor 8 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor EEK) (EPH- and ELK-related kinase) (HEK3). [Source:Uniprot/SWISSPROT;Acc:P29322]
16.4476 -15.44 0.000117586 400 5 3 5 [+] picture button
PXMP4 SINFRUT00000138024 Peroxisomal membrane protein 4 (24 kDa peroxisomal intrinsic membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I8]
18.9375 -24.6 0.000119486 400 7 2 11 [+] picture button
NP_061900.1 SINFRUT00000160123 RNA-binding protein (FLJ20273), mRNA [Source:RefSeq_dna;Acc:NM_019027]
16.805 -18.93 0.0001201 400 4 2 7 [+] picture button
FZD10 SINFRUT00000142418 Frizzled-10 precursor (Fz-10) (hFz10) (FzE7) (CD350 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9ULW2]
17.0658 -19.66 0.000137523 400 4 1 8 [+] picture button
SPATA13 SINFRUT00000158388 Spermatogenesis-associated protein 13. [Source:Uniprot/SWISSPROT;Acc:Q96N96]
16.6254 -14.4 0.000149743 400 8 3 13 [+] picture button
PDE6D SINFRUT00000138292 Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (EC 3.1.4.17) (GMP-PDE delta) (p17 protein). [Source:Uniprot/SWISSPROT;Acc:O43924]
17.5062 -18.4 0.000163375 400 5 2 7 [+] picture button
BAZ2A SINFRUT00000170754 Bromodomain adjacent to zinc finger domain protein 2A (Transcription termination factor I-interacting protein 5) (TTF-I-interacting protein 5) (Tip5) (hWALp3). [Source:Uniprot/SWISSPROT;Acc:Q9UIF9]
16.4417 -17.02 0.000173297 400 4 4 9 [+] picture button
MAPK8IP3 SINFRUT00000159524 C-jun-amino-terminal kinase-interacting protein 3 (JNK-interacting protein 3) (JIP-3) (JNK MAP kinase scaffold protein 3) (Mitogen- activated protein kinase 8-interacting protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9UPT6]
17.9466 -22.6 0.000174027 400 5 3 7 [+] picture button
C6orf182 SINFRUT00000150162 Uncharacterized protein C6orf182. [Source:Uniprot/SWISSPROT;Acc:Q8IYX8]
17.286 -18.51 0.000184115 400 6 2 9 [+] picture button
HSD17B10 SINFRUT00000130778 3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxyacyl- CoA dehydrogenase type II) (Type II HADH) (3-hydroxy-2-methylbutyryl- CoA dehydrogenase) (EC 1.1.1.178) (Endoplasmic reticulum-associated amyloid beta-peptide-binding protein) (Short-cha [Source:Uniprot/SWISSPROT;Acc:Q99714]
17.5 -15.95 0.000192914 400 4 3 11 [+] picture button
BTBD1 SINFRUT00000161946 BTB/POZ domain-containing protein 1 (Hepatitis C virus NS5A- transactivated protein 8) (HCV NS5A-transactivated protein 8). [Source:Uniprot/SWISSPROT;Acc:Q9H0C5]
16.1119 -16.9 0.000209216 400 6 3 11 [+] picture button
NP_001034703.1 SINFRUT00000146313 RIKEN cDNA 6030419C18 gene [Source:MarkerSymbol;Acc:MGI:2442108]RIKEN cDNA 6030419C18 gene [Source:MarkerSymbol;Acc:MGI:2442108] BY ORTHOLOGY TO:ENSMUST00000085658
18.7173 -21.44 0.000209342 400 3 3 7 [+] picture button
MXD4 SINFRUT00000153473 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]
15.8876 -18.83 0.000211747 400 4 2 7 [+] picture button
VPS36 SINFRUT00000141611 Vacuolar protein sorting-associated protein 36 (ELL-associated protein of 45 kDa). [Source:Uniprot/SWISSPROT;Acc:Q86VN1]
16.4052 -13.5 0.000212899 400 7 2 11 [+] picture button
GPR103 SINFRUT00000182196 Orexigenic neuropeptide QRFP receptor (G-protein coupled receptor 103) (SP9155) (AQ27). [Source:Uniprot/SWISSPROT;Acc:Q96P65]
16.7355 -22.81 0.000215569 400 3 3 4 [+] picture button
PLEKHA1 (1 of 2) SINFRUT00000166833 Pleckstrin homology domain-containing family A member 1 (Tandem PH domain-containing protein 1) (TAPP-1). [Source:Uniprot/SWISSPROT;Acc:Q9HB21]
16.4651 -17.5 0.000223704 400 10 3 15 [+] picture button
UHMK1 SINFRUT00000151051 Serine/threonine-protein kinase Kist (EC 2.7.11.1) (Kinase interacting with stathmin) (U2AF homology motif kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q8TAS1]
16.6254 -16.38 0.000301218 400 4 2 7 [+] picture button
SINFRUT00000182968 Homolog of Xiphophorus maculatus "Four jointed box 1. [Source:Uniprot/SPTREMBL;Acc:Q5ZEQ8]"
16.7355 -18.33 0.000333346 400 3 4 5 [+] picture button
MTMR2 SINFRUT00000141969 Myotubularin-related protein 2 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q13614]
17.1281 -18.96 0.000336861 400 8 3 15 [+] picture button
WTIP SINFRUT00000155385 Wilms tumor 1 interacting protein [Source:RefSeq_peptide;Acc:NP_001073905]
16.2951 -19.43 0.000344274 400 4 3 7 [+] picture button
CLIP4 SINFRUT00000138713 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
17.2448 -15.35 0.000344757 400 6 9 17 [+] picture button
SLC28A3 SINFRUT00000180860 concentrative Na+-nucleoside cotransporter [Source:RefSeq_peptide;Acc:NP_071410]
16.484 -15.93 0.000375892 400 5 1 6 [+] picture button

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Download table: GFF TXT
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