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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-196a

718 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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MYC SINFRUT00000142540 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.4068 -14.15 0.0000000204235 400 6 13 10 [+] picture button
CDR1 SINFRUT00000180937 cerebellar degeneration-related protein 1, 34kDa [Source:RefSeq_peptide;Acc:NP_004056]
20.589 -27.32 0.000001 400 10 1 5 [+] picture button
BXDC2 SINFRUT00000160488 Brix domain-containing protein 2 (Ribosome biogenesis protein Brix). [Source:Uniprot/SWISSPROT;Acc:Q8TDN6]
16.2951 -20.77 0.00000241668 400 7 2 10 [+] picture button
KCNJ10 (2 of 2) SINFRUT00000158178 ATP-sensitive inward rectifier potassium channel 10 (Potassium channel, inwardly rectifying subfamily J member 10) (Inward rectifier K(+) channel Kir1.2) (ATP-dependent inwardly rectifying potassium channel Kir4.1). [Source:Uniprot/SWISSPROT;Acc:P78508]
16.7355 -21.91 0.00000430263 400 5 1 8 [+] picture button
CPB2 SINFRUT00000145317 Carboxypeptidase B2 precursor (EC 3.4.17.20) (Carboxypeptidase U) (CPU) (Thrombin-activable fibrinolysis inhibitor) (TAFI) (Plasma carboxypeptidase B) (pCPB). [Source:Uniprot/SWISSPROT;Acc:Q96IY4]
16.8456 -16.87 0.00000613553 400 7 2 15 [+] picture button
GNPNAT1 SINFRUT00000159670 Glucosamine 6-phosphate N-acetyltransferase (EC 2.3.1.4) (Phosphoglucosamine transacetylase) (Phosphoglucosamine acetylase). [Source:Uniprot/SWISSPROT;Acc:Q96EK6]
16.9265 -19.81 0.00000777778 400 6 2 13 [+] picture button
COL14A1 (2 of 2) SINFRUT00000153665 Collagen alpha-1(XIV) chain precursor (Undulin). [Source:Uniprot/SWISSPROT;Acc:Q05707]
17.5062 -17.35 0.00000844249 400 4 3 6 [+] picture button
C10orf119 SINFRUT00000177181 Uncharacterized protein C10orf119. [Source:Uniprot/SWISSPROT;Acc:Q9BTE3]
16.185 -12.01 0.000009314 400 4 1 6 [+] picture button
VSNL1 (1 of 2) SINFRUT00000178590 Visinin-like protein 1 (VILIP) (Hippocalcin-like protein 3) (HLP3). [Source:Uniprot/SWISSPROT;Acc:P62760]
17.4772 -16.62 0.0000121726 400 3 9 4 [+] picture button
COL1A2 SINFRUT00000144114 Collagen alpha-2(I) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P08123]
17.7903 -10.9 0.0000124962 400 6 7 11 [+] picture button
TNNC1 SINFRUT00000135032 Troponin C, slow skeletal and cardiac muscles (TN-C). [Source:Uniprot/SWISSPROT;Acc:P63316]
17.1759 -13.73 0.000014058 400 4 3 5 [+] picture button
ACTN2 SINFRUT00000157266 Alpha-actinin-2 (Alpha actinin skeletal muscle isoform 2) (F-actin cross-linking protein). [Source:Uniprot/SWISSPROT;Acc:P35609]
16.4417 -17.44 0.0000177115 400 3 1 3 [+] picture button
YIPF2 SINFRUT00000150065 Protein YIPF2 (YIP1 family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9BWQ6]
16.7355 -16.02 0.0000210004 400 9 1 19 [+] picture button
ZFPM1 SINFRUT00000180923 Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1). [Source:Uniprot/SWISSPROT;Acc:Q8IX07]
22.6016 -30.7 0.0000269095 400 5 2 10 [+] picture button
HOXA5 SINFRUT00000159074 Homeobox protein Hox-A5 (Hox-1C). [Source:Uniprot/SWISSPROT;Acc:P20719]
16.7355 -13.66 0.0000343481 400 5 6 8 [+] picture button
SSR1 SINFRUT00000180854 Translocon-associated protein subunit alpha precursor (TRAP-alpha) (Signal sequence receptor subunit alpha) (SSR-alpha). [Source:Uniprot/SWISSPROT;Acc:P43307]
16.0742 -17.2 0.0000400446 400 4 2 9 [+] picture button
KIAA2022 SINFRUT00000152396 Uncharacterized protein KIAA2022. [Source:Uniprot/SWISSPROT;Acc:Q5QGS0]
18.1072 -16.66 0.0000433356 400 5 7 7 [+] picture button
NP_001014985.1 (1 of 2) SINFRUT00000141942 RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527]RIKEN cDNA C730027E14 gene [Source:MarkerSymbol;Acc:MGI:2444527] BY ORTHOLOGY TO:ENSMUST00000057685
17.3961 -20.02 0.0000462565 400 7 2 11 [+] picture button
NP_775830.1 SINFRUT00000134962 CDNA FLJ25791 fis, clone TST06952. [Source:Uniprot/SPTREMBL;Acc:Q8N7C6]
16.384 -15.69 0.0000477707 400 5 2 10 [+] picture button
Q5TIL3_FUGRU SINFRUT00000163518 Alpha 2,3-sialyltransferase (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5TIL3]
16.6254 -11.46 0.0000498107 400 4 1 5 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
18.2769 -18.37 0.0000563586 400 4 2 7 [+] picture button
C1orf82 SINFRUT00000135603 UPF0385 protein C1orf82. [Source:Uniprot/SWISSPROT;Acc:Q8IXW5]
16.1947 -11.7 0.000060416 400 7 2 10 [+] picture button
NP_001073985.1 SINFRUT00000169539 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.2238 -9.59 0.0000672894 400 4 1 5 [+] picture button
DUSP12 SINFRUT00000140226 Dual specificity protein phosphatase 12 (EC 3.1.3.48) (EC 3.1.3.16) (Dual specificity tyrosine phosphatase YVH1). [Source:Uniprot/SWISSPROT;Acc:Q9UNI6]
18.0567 -19.36 0.0000762349 400 4 3 9 [+] picture button
DSEL SINFRUT00000144430 Dermatan-sulfate epimerase-like protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q8IZU8]
16.7355 -25.4 0.0000791434 400 6 2 11 [+] picture button
TUBD1 SINFRUT00000177077 Tubulin delta chain (Delta tubulin). [Source:Uniprot/SWISSPROT;Acc:Q9UJT1]
16.2951 -24.55 0.0000799682 400 4 2 5 [+] picture button
BRWD1 SINFRUT00000166671 Bromodomain and WD repeat domain-containing protein 1 (WD repeat protein 9). [Source:Uniprot/SWISSPROT;Acc:Q9NSI6]
16.0749 -13.16 0.0000863091 400 7 2 11 [+] picture button
SAR1A SINFRUT00000152512 GTP-binding protein SAR1a (COPII-associated small GTPase). [Source:Uniprot/SWISSPROT;Acc:Q9NR31]
17.5954 -16.48 0.00009376 400 4 2 8 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
17.0658 -19.04 0.0000942763 400 4 1 6 [+] picture button
C12orf48 SINFRUT00000149514 UPF0419 protein C12orf48. [Source:Uniprot/SWISSPROT;Acc:Q9NWS1]
16.2951 -12.77 0.000108394 400 8 2 16 [+] picture button
SERINC5 SINFRUT00000175634 developmentally regulated protein TPO1 [Source:RefSeq_peptide;Acc:NP_840060]
17.1828 -14.01 0.000110032 400 2 3 5 [+] picture button
SINFRUT00000171913 Homolog of Homo sapiens "Splice Isoform 1 of Friend leukemia integration 1 transcription factor [Source:IPI;Acc:IPI00329755]"
16.2951 -16.2 0.000112042 400 7 4 7 [+] picture button
PIGV SINFRUT00000153727 GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Phosphatidylinositol-glycan biosynthesis class V protein) (PIG-V). [Source:Uniprot/SWISSPROT;Acc:Q9NUD9]
16.7355 -15.14 0.000116249 400 8 3 14 [+] picture button
PXMP4 SINFRUT00000138024 Peroxisomal membrane protein 4 (24 kDa peroxisomal intrinsic membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I8]
18.9375 -24.6 0.000119486 400 7 2 11 [+] picture button
NP_061900.1 SINFRUT00000160123 RNA-binding protein (FLJ20273), mRNA [Source:RefSeq_dna;Acc:NM_019027]
16.1372 -18.93 0.0001201 400 4 2 7 [+] picture button
FZD10 SINFRUT00000142418 Frizzled-10 precursor (Fz-10) (hFz10) (FzE7) (CD350 antigen). [Source:Uniprot/SWISSPROT;Acc:Q9ULW2]
16.7355 -18.2 0.000137523 400 4 1 8 [+] picture button
NP_776190.1 SINFRUT00000175706 P18SRP protein [Source:RefSeq_peptide;Acc:NP_776190]
16.5634 -20.03 0.000159389 400 5 1 7 [+] picture button
PDE6D SINFRUT00000138292 Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta (EC 3.1.4.17) (GMP-PDE delta) (p17 protein). [Source:Uniprot/SWISSPROT;Acc:O43924]
16.6254 -16.16 0.000163375 400 5 2 7 [+] picture button
MAPK8IP3 SINFRUT00000159524 C-jun-amino-terminal kinase-interacting protein 3 (JNK-interacting protein 3) (JIP-3) (JNK MAP kinase scaffold protein 3) (Mitogen- activated protein kinase 8-interacting protein 3). [Source:Uniprot/SWISSPROT;Acc:Q9UPT6]
17.0658 -19.81 0.000174027 400 5 3 7 [+] picture button
C6orf182 SINFRUT00000150162 Uncharacterized protein C6orf182. [Source:Uniprot/SWISSPROT;Acc:Q8IYX8]
16.4052 -18.51 0.000184115 400 6 2 9 [+] picture button
HSD17B10 SINFRUT00000130778 3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxyacyl- CoA dehydrogenase type II) (Type II HADH) (3-hydroxy-2-methylbutyryl- CoA dehydrogenase) (EC 1.1.1.178) (Endoplasmic reticulum-associated amyloid beta-peptide-binding protein) (Short-cha [Source:Uniprot/SWISSPROT;Acc:Q99714]
17.1677 -20.8 0.000192914 400 4 3 11 [+] picture button
BTBD1 SINFRUT00000161946 BTB/POZ domain-containing protein 1 (Hepatitis C virus NS5A- transactivated protein 8) (HCV NS5A-transactivated protein 8). [Source:Uniprot/SWISSPROT;Acc:Q9H0C5]
17.007 -21.52 0.000209216 400 6 3 11 [+] picture button
NP_001034703.1 SINFRUT00000146313 RIKEN cDNA 6030419C18 gene [Source:MarkerSymbol;Acc:MGI:2442108]RIKEN cDNA 6030419C18 gene [Source:MarkerSymbol;Acc:MGI:2442108] BY ORTHOLOGY TO:ENSMUST00000085658
17.8365 -17.24 0.000209342 400 3 3 7 [+] picture button
NEDD4 SINFRUT00000183629 E3 ubiquitin-protein ligase NEDD4 (EC 6.3.2.-). [Source:Uniprot/SWISSPROT;Acc:P46934]
16.0749 -10.67 0.000213545 400 5 3 6 [+] picture button
GPR103 SINFRUT00000182196 Orexigenic neuropeptide QRFP receptor (G-protein coupled receptor 103) (SP9155) (AQ27). [Source:Uniprot/SWISSPROT;Acc:Q96P65]
17.6163 -22.81 0.000215569 400 3 3 4 [+] picture button
USP48 SINFRUT00000162633 Ubiquitin carboxyl-terminal hydrolase 48 (EC 3.1.2.15) (Ubiquitin thioesterase 48) (Ubiquitin-specific-processing protease 48) (Deubiquitinating enzyme 48). [Source:Uniprot/SWISSPROT;Acc:Q86UV5]
16.1152 -19 0.00022177 400 4 2 6 [+] picture button
PLEKHA1 (1 of 2) SINFRUT00000166833 Pleckstrin homology domain-containing family A member 1 (Tandem PH domain-containing protein 1) (TAPP-1). [Source:Uniprot/SWISSPROT;Acc:Q9HB21]
16.4651 -17.42 0.000223704 400 10 3 15 [+] picture button
GSTCD SINFRUT00000163323 glutathione S-transferase, C-terminal domain containing isoform 1 [Source:RefSeq_peptide;Acc:NP_001026890]
16.5153 -10.11 0.000223902 400 3 2 4 [+] picture button
UHMK1 SINFRUT00000151051 Serine/threonine-protein kinase Kist (EC 2.7.11.1) (Kinase interacting with stathmin) (U2AF homology motif kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q8TAS1]
16.4052 -14.42 0.000301218 400 4 2 7 [+] picture button
SINFRUT00000182968 Homolog of Xiphophorus maculatus "Four jointed box 1. [Source:Uniprot/SPTREMBL;Acc:Q5ZEQ8]"
16.4052 -18.33 0.000333346 400 3 4 5 [+] picture button

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Download table: GFF TXT
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