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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-194

720 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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TMEM91 SINFRUT00000156661 Transmembrane protein 91. [Source:Uniprot/SWISSPROT;Acc:Q6ZNR0]
17.2643 -16.76 6.94665e-10 400 7 3 9 [+] picture button
PDHB SINFRUT00000157804 Pyruvate dehydrogenase E1 component subunit beta, mitochondrial precursor (EC 1.2.4.1) (PDHE1-B). [Source:Uniprot/SWISSPROT;Acc:P11177]
16.4581 -16.05 2.19066e-09 400 7 4 9 [+] picture button
Q6WNS0_FUGRU SINFRUT00000160314 Transcription factor Sox5. [Source:Uniprot/SPTREMBL;Acc:Q6WNS0]
16.2404 -16.81 1.33562e-07 400 4 10 6 [+] picture button
TRIM23 SINFRUT00000136541 GTP-binding protein ARD-1 (ADP-ribosylation factor domain protein 1) (Tripartite motif-containing protein 23) (RING finger protein 46). [Source:Uniprot/SWISSPROT;Acc:P36406]
15.9363 -11.9 5.80988e-07 400 2 2 2 [+] picture button
SINFRUT00000182939 NOT ANNOTATED
16.2683 -11.79 1e-06 400 15 1 5 [+] picture button
NUDC SINFRUT00000151052 Nuclear migration protein nudC (Nuclear distribution protein C homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y266]
17.043 -18.76 1.42802e-06 400 6 1 10 [+] picture button
ANKRD46 SINFRUT00000134201 Ankyrin repeat domain-containing protein 46 (Ankyrin repeat small protein) (ANK-S). [Source:Uniprot/SWISSPROT;Acc:Q86W74]
16.2683 -12.37 1.75219e-06 400 5 1 4 [+] picture button
SINFRUT00000181008 Transcribed locus, weakly similar to NP_079904.1 cytochrome c oxidase, subunit VIb polypeptide 1 [Mus musculus] [Source:UniGene;Acc:Tru.2311]
18.039 -18.33 2.4525e-06 400 3 3 6 [+] picture button
MIB2 SINFRUT00000148345 E3 ubiquitin-protein ligase MIB2 (EC 6.3.2.-) (Mind bomb homolog 2) (Zinc finger ZZ type with ankyrin repeat domain protein 1) (Skeletrophin) (Novelzin) (Novel zinc finger protein) (Putative NF- kappa-B-activating protein 002N). [Source:Uniprot/SWISSPROT;Acc:Q96AX9]
17.1969 -18.57 2.65026e-06 400 7 4 9 [+] picture button
NP_001027798.1 SINFRUT00000127255 SMC3 protein [Source:RefSeq_peptide;Acc:NP_001027798]
16.3047 -14.43 2.93655e-06 400 4 1 4 [+] picture button
ERICH1 SINFRUT00000180820 Glutamate-rich protein 1. [Source:Uniprot/SWISSPROT;Acc:Q86X53]
16.379 -15.55 4.19935e-06 400 4 3 5 [+] picture button
ACAT1 SINFRUT00000142166 Acetyl-CoA acetyltransferase, mitochondrial precursor (EC 2.3.1.9) (Acetoacetyl-CoA thiolase) (T2). [Source:Uniprot/SWISSPROT;Acc:P24752]
17.231 -12.26 4.21805e-06 400 5 5 8 [+] picture button
GIPC1 SINFRUT00000180636 PDZ domain-containing protein GIPC1 (RGS19-interacting protein 1) (GAIP C-terminus-interacting protein) (RGS-GAIP-interacting protein) (Tax interaction protein 2) (TIP-2). [Source:Uniprot/SWISSPROT;Acc:O14908]
16.0829 -15.95 5.10726e-06 400 5 2 6 [+] picture button
MTHFD2 SINFRUT00000150733 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]. [Source:Uniprot/SWISSPROT;Acc:P13995]
17.1921 -12.89 5.52899e-06 400 5 4 19 [+] picture button
KIAA1737 SINFRUT00000144615 Uncharacterized protein KIAA1737. [Source:Uniprot/SWISSPROT;Acc:Q9C0C6]
16.379 -11.01 7.05893e-06 400 4 2 5 [+] picture button
COX19 SINFRUT00000127662 Cytochrome c oxidase assembly protein COX19 (hCOX19). [Source:Uniprot/SWISSPROT;Acc:Q49B96]
16.9323 -18.53 7.55258e-06 400 5 2 5 [+] picture button
TRAK1 (2 of 2) SINFRUT00000171161 Trafficking kinesin-binding protein 1 (106 kDa O-GlcNAc transferase- interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9UPV9]
16.6003 -20.71 8.5757e-06 400 3 2 3 [+] picture button
RRAGB SINFRUT00000150511 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
17.652 -18.54 9.19147e-06 400 10 3 21 [+] picture button
HK2 SINFRUT00000180026 Hexokinase-2 (EC 2.7.1.1) (Hexokinase type II) (HK II) (Muscle form hexokinase). [Source:Uniprot/SWISSPROT;Acc:P52789]
18.1903 -16.13 1.5832e-05 400 4 2 7 [+] picture button
MELK SINFRUT00000149301 Maternal embryonic leucine zipper kinase (EC 2.7.11.1) (hMELK) (Protein kinase PK38) (hPK38). [Source:Uniprot/SWISSPROT;Acc:Q14680]
16.4896 -12.81 1.71995e-05 400 6 5 13 [+] picture button
Q659G3_HUMAN SINFRUT00000158938 SRP9 protein. [Source:Uniprot/SPTREMBL;Acc:Q6P2S0]
16.711 -14.14 2.28172e-05 400 6 2 8 [+] picture button
DENND4B SINFRUT00000172014 DENN/MADD domain containing 4B. [Source:Uniprot/SPTREMBL;Acc:Q5T4K0]
16.6003 -13.54 2.3811e-05 400 4 1 6 [+] picture button
PHF1 SINFRUT00000127461 PHD finger protein 1 (Protein PHF1). [Source:Uniprot/SWISSPROT;Acc:O43189]
16.4965 -14.91 2.48106e-05 400 5 2 6 [+] picture button
LAMP2 SINFRUT00000133208 Lysosome-associated membrane glycoprotein 2 precursor (LAMP-2) (CD107b antigen). [Source:Uniprot/SWISSPROT;Acc:P13473]
16.63 -15.45 2.96521e-05 400 5 1 12 [+] picture button
SINFRUT00000160558 Homolog of Homo sapiens "Splice Isoform 3 of Protein C20orf54 [Source:IPI;Acc:IPI00334593]"
16.7397 -16.23 3.02377e-05 400 8 3 11 [+] picture button
PACSIN2 SINFRUT00000145987 Protein kinase C and casein kinase substrate in neurons protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9UNF0]
17.0957 -15.28 3.25276e-05 400 8 1 10 [+] picture button
NP_689968.1 SINFRUT00000178458 PRotein Associated with Tlr4 [Source:RefSeq_peptide;Acc:NP_689968]
20.363 -24.47 3.57933e-05 400 7 2 10 [+] picture button
SCLY SINFRUT00000142178 selenocysteine lyase [Source:RefSeq_peptide;Acc:NP_057594]
16.0469 -17.24 3.75072e-05 400 7 1 11 [+] picture button
JAM2 (2 of 2) SINFRUT00000138408 Junctional adhesion molecule B precursor (JAM-B) (Junctional adhesion molecule 2) (Vascular endothelial junction-associated molecule) (VE- JAM) (CD322 antigen). [Source:Uniprot/SWISSPROT;Acc:P57087]
16.0469 -13.52 5.2877e-05 400 7 1 8 [+] picture button
TCTEX1D1 SINFRUT00000135509 Tctex1 domain containing 1 [Source:RefSeq_peptide;Acc:NP_689878]
16.8014 -16.48 5.70637e-05 400 3 2 5 [+] picture button
ATP6V1H SINFRUT00000157501 Vacuolar ATP synthase subunit H (EC 3.6.3.14) (V-ATPase H subunit) (Vacuolar proton pump subunit H) (V-ATPase 50/57 kDa subunits) (Vacuolar proton pump subunit SFD) (VMA13) (Nef-binding protein 1) (NBP1). [Source:Uniprot/SWISSPROT;Acc:Q9UI12]
16.2683 -10.71 6.03295e-05 400 4 4 5 [+] picture button
DNM1 (2 of 2) SINFRUT00000179461 Dynamin-1 (EC 3.6.5.5). [Source:Uniprot/SWISSPROT;Acc:Q05193]
17.2643 -12.9 6.23746e-05 400 3 2 3 [+] picture button
RIC8B SINFRUT00000164753 Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B). [Source:Uniprot/SWISSPROT;Acc:Q9NVN3]
15.9994 -12.97 6.31172e-05 400 3 1 4 [+] picture button
PYGL SINFRUT00000143844 Glycogen phosphorylase, liver form (EC 2.4.1.1). [Source:Uniprot/SWISSPROT;Acc:P06737]
16.0469 -14.92 6.40433e-05 400 6 2 6 [+] picture button
PPARD SINFRUT00000154296 Peroxisome proliferator-activated receptor delta (PPAR-delta) (PPAR- beta) (Nuclear hormone receptor 1) (NUC1) (NUCI). [Source:Uniprot/SWISSPROT;Acc:Q03181]
16.2683 -12.89 6.73809e-05 400 6 2 11 [+] picture button
HTATSF1 SINFRUT00000148407 HIV Tat-specific factor 1 (Tat-SF1). [Source:Uniprot/SWISSPROT;Acc:O43719]
16.379 -18.53 6.90563e-05 400 7 2 8 [+] picture button
TMEM159 SINFRUT00000183433 Promethin (Transmembrane protein 159). [Source:Uniprot/SWISSPROT;Acc:Q96B96]
16.9323 -17.2 6.94615e-05 400 6 2 10 [+] picture button
GGCX SINFRUT00000159827 Vitamin K-dependent gamma-carboxylase (EC 6.4.-.-) (Gamma-glutamyl carboxylase) (Vitamin K gamma glutamyl carboxylase). [Source:Uniprot/SWISSPROT;Acc:P38435]
16.8593 -16.94 7.07394e-05 400 6 2 7 [+] picture button
C14orf68 SINFRUT00000152308 Hepatocellular carcinoma-downregulated mitochondrial carrier protein. [Source:Uniprot/SPTREMBL;Acc:Q6Q0C1]
16.8216 -13.62 7.10407e-05 400 7 1 9 [+] picture button
BCL6 (2 of 2) SINFRUT00000160785 B-cell lymphoma 6 protein (BCL-6) (Zinc finger protein 51) (LAZ-3 protein) (BCL-5) (Zinc finger and BTB domain-containing protein 27). [Source:Uniprot/SWISSPROT;Acc:P41182]
17.8176 -15.91 7.42645e-05 400 6 4 9 [+] picture button
NOX3 SINFRUT00000171368 NADPH oxidase 3 (EC 1.6.3.-) (gp91phox homolog 3) (GP91-3) (Mitogenic oxidase 2). [Source:Uniprot/SWISSPROT;Acc:Q9HBY0]
15.8256 -17.08 7.77043e-05 400 7 2 8 [+] picture button
IARS SINFRUT00000164103 Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) (IRS). [Source:Uniprot/SWISSPROT;Acc:P41252]
17.356 -14.16 8.28468e-05 400 7 3 8 [+] picture button
RABGGTB SINFRUT00000158724 Geranylgeranyl transferase type-2 subunit beta (EC 2.5.1.60) (Geranylgeranyl transferase type II subunit beta) (Rab geranylgeranyltransferase subunit beta) (Rab geranyl- geranyltransferase subunit beta) (Rab GG transferase beta) (Rab GGTase beta). [Source:Uniprot/SWISSPROT;Acc:P53611]
17.0141 -12.89 8.364e-05 400 6 2 8 [+] picture button
TADA2L SINFRUT00000136740 Transcriptional adapter 2-like (ADA2-like protein). [Source:Uniprot/SWISSPROT;Acc:O75478]
16.5549 -14.18 8.43172e-05 400 5 2 7 [+] picture button
HS3ST1 SINFRUT00000134873 Heparan sulfate glucosamine 3-O-sulfotransferase 1 precursor (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 1) (Heparan sulfate 3-O-sulfotransferase 1) (h3-OST-1). [Source:Uniprot/SWISSPROT;Acc:O14792]
16.1151 -13.17 8.79243e-05 400 4 7 7 [+] picture button
DEADC1 SINFRUT00000147609 deaminase domain containing 1 [Source:RefSeq_peptide;Acc:NP_872309]
15.9363 -14.96 8.86838e-05 400 1 1 2 [+] picture button
Q90510_FUGRU SINFRUT00000180683 Atf_like protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q90510]
17.5963 -16.58 0.000100602 400 8 3 10 [+] picture button
ATIC SINFRUT00000139899 Bifunctional purine biosynthesis protein PURH [Includes: Phosphoribosylaminoimidazolecarboxamide formyltransferase (EC 2.1.2.3) (5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase) (AICAR transformylase); IMP cyclohydrolase (EC 3.5.4.10) (Ino [Source:Uniprot/SWISSPROT;Acc:P31939]
17.1536 -15.46 0.000103811 400 7 1 11 [+] picture button
RAB38 SINFRUT00000182776 Ras-related protein Rab-38 (Antigen NY-MEL-1). [Source:Uniprot/SWISSPROT;Acc:P57729]
16.7779 -11.26 0.000108823 400 3 1 5 [+] picture button
C6orf137 (2 of 2) SINFRUT00000135552 Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7]
17.1536 -20.76 0.000110457 400 6 4 12 [+] picture button

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Download table: GFF TXT
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