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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-192

741 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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SNRPD3 SINFRUT00000141225 Small nuclear ribonucleoprotein Sm D3 (snRNP core protein D3) (Sm-D3). [Source:Uniprot/SWISSPROT;Acc:P62318]
16.0031 -13.79 1e-06 400 8 1 5 [+] picture button
SINFRUT00000179779 Homolog of Homo sapiens "Zonadhesin isoform 3 [Source:IPI;Acc:IPI00397425]"
15.1616 -18.64 1e-06 400 9 1 2 [+] picture button
SINFRUT00000147181 Homolog of Homo sapiens "Intrinsic factor-B12 receptor precursor [Source:IPI;Acc:IPI00160130]"
16.8033 -19.66 1e-06 400 6 1 5 [+] picture button
NP_689894.1 SINFRUT00000160346 CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928]
16.3047 -18.07 1.0979e-06 400 6 5 12 [+] picture button
DLG7 SINFRUT00000183407 Discs large homolog 7 (Hepatoma up-regulated protein) (HURP). [Source:Uniprot/SWISSPROT;Acc:Q15398]
16.0469 -19.32 6.03328e-06 400 7 2 8 [+] picture button
ZCD2 SINFRUT00000135160 zinc finger, CDGSH-type domain 2 [Source:RefSeq_peptide;Acc:NP_001008389]
16.9702 -15.15 8.83107e-06 400 3 2 5 [+] picture button
PCTP SINFRUT00000151197 Phosphatidylcholine transfer protein (PC-TP) (StAR-related lipid transfer protein 2) (StARD2) (START domain-containing protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9UKL6]
15.8256 -21.51 1.04151e-05 400 6 1 9 [+] picture button
NUP188 SINFRUT00000181701 nucleoporin 188kDa [Source:RefSeq_peptide;Acc:NP_056169]
16.7579 -19.97 2.09445e-05 400 6 3 11 [+] picture button
FRRS1 SINFRUT00000160154 stromal cell derived factor receptor 2 homolog [Source:RefSeq_peptide;Acc:NP_001013682]
15.4936 -14.7 2.25966e-05 400 5 1 8 [+] picture button
PGM3 SINFRUT00000166375 Phosphoacetylglucosamine mutase (EC 5.4.2.3) (PAGM) (Acetylglucosamine phosphomutase) (N-acetylglucosamine-phosphate mutase) (Phosphoglucomutase 3). [Source:Uniprot/SWISSPROT;Acc:O95394]
15.1865 -11.9 2.60476e-05 400 6 2 10 [+] picture button
KLHL34 SINFRUT00000143590 Kelch-like protein 34. [Source:Uniprot/SWISSPROT;Acc:Q8N239]
15.6043 -12.07 2.6077e-05 400 9 2 13 [+] picture button
TINF2 (2 of 4) SINFRUT00000179000 TERF1-interacting nuclear factor 2 (TRF1-interacting nuclear protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9BSI4]
16.2683 -13.13 2.81429e-05 400 5 2 7 [+] picture button
BMPER SINFRUT00000162113 BMP-binding endothelial regulator protein precursor (Bone morphogenetic protein-binding endothelial cell precursor-derived regulator) (Protein crossveinless-2) (hCV2). [Source:Uniprot/SWISSPROT;Acc:Q8N8U9]
15.3152 -15.89 2.91234e-05 400 6 2 10 [+] picture button
HSF1 SINFRUT00000171006 Heat shock factor protein 1 (HSF 1) (Heat shock transcription factor 1) (HSTF 1). [Source:Uniprot/SWISSPROT;Acc:Q00613]
17.866 -16.78 2.93225e-05 400 5 2 9 [+] picture button
FLNB SINFRUT00000147431 Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like protein) (Thyroid autoantigen) (Truncated actin-binding protein) (Truncated ABP) (ABP- 280 homolog) (ABP-278) (Filamin 3) (Filamin homolog 1) (Fh1). [Source:Uniprot/SWISSPROT;Acc:O75369]
17.707 -17.29 3.22346e-05 400 7 3 13 [+] picture button
CLTB SINFRUT00000176860 Clathrin light chain B (Lcb). [Source:Uniprot/SWISSPROT;Acc:P09497]
16.8737 -12.31 4.52554e-05 400 5 3 8 [+] picture button
SINFRUT00000182933 Homolog of Homo sapiens "CDK5 and ABL1 enzyme substrate 2 [Source:IPI;Acc:IPI00030512]"
18.1497 -21.13 5.1132e-05 400 12 1 5 [+] picture button
C15orf39 SINFRUT00000179588 Uncharacterized protein C15orf39. [Source:Uniprot/SWISSPROT;Acc:Q6ZRI6]
16.4896 -13.02 5.82622e-05 400 8 3 10 [+] picture button
MCEE SINFRUT00000151378 Methylmalonyl-CoA epimerase, mitochondrial precursor (EC 5.1.99.1) (DL-methylmalonyl-CoA racemase). [Source:Uniprot/SWISSPROT;Acc:Q96PE7]
16.1576 -16.27 5.94209e-05 400 6 1 9 [+] picture button
PARK7 SINFRUT00000147408 Protein DJ-1 (Oncogene DJ1) (Parkinson disease protein 7). [Source:Uniprot/SWISSPROT;Acc:Q99497]
15.2482 -14.48 6.08361e-05 400 8 2 11 [+] picture button
RAPGEF3 SINFRUT00000130341 Rap guanine nucleotide exchange factor 3 (cAMP-regulated guanine nucleotide exchange factor I) (cAMP-GEFI) (Exchange factor directly activated by cAMP 1) (Epac 1) (Rap1 guanine-nucleotide-exchange factor directly activated by cAMP). [Source:Uniprot/SWISSPROT;Acc:O95398]
16.379 -13.84 6.25438e-05 400 6 2 10 [+] picture button
IGSF9 (1 of 2) SINFRUT00000141245 immunoglobulin superfamily, member 9 [Source:RefSeq_peptide;Acc:NP_065840]
15.2723 -11.27 7.09994e-05 400 7 2 10 [+] picture button
CCDC124 SINFRUT00000132532 Coiled-coil domain-containing protein 124. [Source:Uniprot/SWISSPROT;Acc:Q96CT7]
15.3829 -16.43 7.23152e-05 400 8 3 10 [+] picture button
NUDT9 SINFRUT00000177997 ADP-ribose pyrophosphatase, mitochondrial precursor (EC 3.6.1.13) (ADP-ribose diphosphatase) (Adenosine diphosphoribose pyrophosphatase) (ADPR-PPase) (ADP-ribose phosphohydrolase) (Nucleoside diphosphate- linked moiety X motif 9) (Nudix motif 9). [Source:Uniprot/SWISSPROT;Acc:Q9BW91]
15.9363 -12.91 7.50684e-05 400 5 2 8 [+] picture button
RECQL5 SINFRUT00000159486 ATP-dependent DNA helicase Q5 (EC 3.6.1.-) (RecQ protein-like 5) (RecQ5). [Source:Uniprot/SWISSPROT;Acc:O94762]
15.3283 -14.55 7.68371e-05 400 8 2 10 [+] picture button
WDR81 SINFRUT00000162958 WD repeat protein 81. [Source:Uniprot/SWISSPROT;Acc:Q562E7]
17.4856 -14.28 8.01507e-05 400 3 3 10 [+] picture button
PRR6 SINFRUT00000137632 Proline-rich protein 6 (Nuclear protein p30). [Source:Uniprot/SWISSPROT;Acc:Q7Z7K6]
16.8717 -16.7 8.42479e-05 400 4 1 7 [+] picture button
CNGA4 SINFRUT00000135789 cyclic nucleotide gated channel alpha 4 [Source:RefSeq_peptide;Acc:NP_001032406]
15.3829 -14.57 8.98234e-05 400 6 2 8 [+] picture button
ENPP6 SINFRUT00000182713 Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 precursor (EC 3.1.-.-) (E-NPP6) (NPP-6) [Contains: Ectonucleotide pyrophosphatase/phosphodiesterase family member 6 soluble form]. [Source:Uniprot/SWISSPROT;Acc:Q6UWR7]
15.0509 -15.82 0.000101019 400 6 1 6 [+] picture button
SLC31A1 SINFRUT00000153734 High-affinity copper uptake protein 1 (hCTR1) (Copper transporter 1) (Solute carrier family 31 member 1). [Source:Uniprot/SWISSPROT;Acc:O15431]
17.4856 -19.41 0.000105023 400 5 1 6 [+] picture button
ECE2 SINFRUT00000151424 Endothelin-converting enzyme 2 (EC 3.4.24.71) (ECE-2). [Source:Uniprot/SWISSPROT;Acc:O60344]
16.7532 -15.46 0.000109729 400 6 6 10 [+] picture button
GDF9 SINFRUT00000152429 Growth/differentiation factor 9 precursor (GDF-9). [Source:Uniprot/SWISSPROT;Acc:O60383]
16.8593 -17.1 0.000120656 400 7 3 12 [+] picture button
PIP5K2B SINFRUT00000132899 Phosphatidylinositol-4-phosphate 5-kinase type-2 beta (EC 2.7.1.68) (Phosphatidylinositol-4-phosphate 5-kinase type II beta) (1- phosphatidylinositol-4-phosphate 5-kinase 2-beta) (PtdIns(4)P-5-kinase isoform 2-beta) (PIP5KII-beta) (Diphosphoinositide kina [Source:Uniprot/SWISSPROT;Acc:P78356]
16.8033 -14.23 0.00012304 400 8 3 9 [+] picture button
BRWD1 SINFRUT00000166671 Bromodomain and WD repeat domain-containing protein 1 (WD repeat protein 9). [Source:Uniprot/SWISSPROT;Acc:Q9NSI6]
15.9363 -13.33 0.000124761 400 7 2 11 [+] picture button
DEPDC1 SINFRUT00000127511 DEP domain-containing protein 1A. [Source:Uniprot/SWISSPROT;Acc:Q5TB30]
16.0469 -16.48 0.00013388 400 7 2 9 [+] picture button
BXDC2 SINFRUT00000160488 Brix domain-containing protein 2 (Ribosome biogenesis protein Brix). [Source:Uniprot/SWISSPROT;Acc:Q8TDN6]
15.2723 -11.58 0.000137743 400 7 2 10 [+] picture button
VASH1 SINFRUT00000141285 Vasohibin-1. [Source:Uniprot/SWISSPROT;Acc:Q7L8A9]
16.6951 -14.83 0.000142701 400 5 2 10 [+] picture button
LNPEP SINFRUT00000148362 Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP). [Source:Uniprot/SWISSPROT;Acc:Q9UIQ6]
16.2683 -12.64 0.000142701 400 8 4 12 [+] picture button
PPM1D (1 of 2) SINFRUT00000139798 Protein phosphatase 2C isoform delta (EC 3.1.3.16) (PP2C-delta) (p53- induced protein phosphatase 1) (Protein phosphatase magnesium- dependent 1 delta). [Source:Uniprot/SWISSPROT;Acc:O15297]
17.375 -14.64 0.000152752 400 6 2 10 [+] picture button
Q6J5K2_FUGRU SINFRUT00000164823 Red-sensitive pigment. [Source:Uniprot/SPTREMBL;Acc:Q6J5K2]
15.8383 -12.23 0.000171643 400 10 2 13 [+] picture button
NOV SINFRUT00000131059 Protein NOV homolog precursor (NovH) (Nephroblastoma overexpressed gene protein homolog). [Source:Uniprot/SWISSPROT;Acc:P48745]
17.5855 -15.19 0.000186942 400 7 3 10 [+] picture button
O93291_FUGRU SINFRUT00000158055 MLL. [Source:Uniprot/SPTREMBL;Acc:O93291]
16.8216 -11.68 0.000187213 400 8 1 9 [+] picture button
C11orf46 SINFRUT00000136828 Uncharacterized protein C11orf46. [Source:Uniprot/SWISSPROT;Acc:Q8N8R7]
17.4093 -12.85 0.000203187 400 8 1 10 [+] picture button
NSF (2 of 2) SINFRUT00000179928 Vesicle-fusing ATPase (EC 3.6.4.6) (Vesicular-fusion protein NSF) (N- ethylmaleimide sensitive fusion protein) (NEM-sensitive fusion protein). [Source:Uniprot/SWISSPROT;Acc:P46459]
18.8228 -17.74 0.000207975 400 4 1 5 [+] picture button
HSD17B10 SINFRUT00000130778 3-hydroxyacyl-CoA dehydrogenase type-2 (EC 1.1.1.35) (3-hydroxyacyl- CoA dehydrogenase type II) (Type II HADH) (3-hydroxy-2-methylbutyryl- CoA dehydrogenase) (EC 1.1.1.178) (Endoplasmic reticulum-associated amyloid beta-peptide-binding protein) (Short-cha [Source:Uniprot/SWISSPROT;Acc:Q99714]
16.032 -14.74 0.000241855 400 4 3 11 [+] picture button
NP_001013670.3 SINFRUT00000158148 similar to hepatitis C virus core-binding protein 6; cervical cancer oncogene 3 (LOC388965), mRNA [Source:RefSeq_dna;Acc:NM_001013648]
16.0179 -14.37 0.000253438 400 6 2 8 [+] picture button
SINFRUT00000163217 Homolog of Homo sapiens "Leucine rich repeat containing 2 [Source:IPI;Acc:IPI00376489]"
18.0433 -17.61 0.000267425 400 4 1 4 [+] picture button
MMS19L SINFRUT00000149038 MMS19-like protein (hMMS19) (MET18 homolog). [Source:Uniprot/SWISSPROT;Acc:Q96T76]
17.1536 -14.13 0.000276228 400 4 2 10 [+] picture button
GRIN2A (2 of 2) SINFRUT00000155662 Glutamate [NMDA] receptor subunit epsilon-1 precursor (N-methyl D- aspartate receptor subtype 2A) (NR2A) (NMDAR2A) (hNR2A). [Source:Uniprot/SWISSPROT;Acc:Q12879]
16.3636 -13.65 0.000277084 400 7 3 7 [+] picture button
KIAA0082 SINFRUT00000144747 KIAA0082 (KIAA0082), mRNA [Source:RefSeq_dna;Acc:NM_015050]
16.4896 -10.15 0.000280051 400 2 1 3 [+] picture button

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Download table: GFF TXT
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