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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-181a*

711 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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ZNF318 SINFRUT00000140094 Zinc finger protein 318 (Endocrine regulatory protein). [Source:Uniprot/SWISSPROT;Acc:Q5VUA4]
18.0788 -21.13 0.000001 400 7 1 5 [+] picture button
MLH3 SINFRUT00000152694 DNA mismatch repair protein Mlh3 (MutL protein homolog 3). [Source:Uniprot/SWISSPROT;Acc:Q9UHC1]
16.4052 -20.94 0.00000102587 400 7 1 8 [+] picture button
XKR4 SINFRUT00000131753 XK-related protein 4. [Source:Uniprot/SWISSPROT;Acc:Q5GH76]
15.3956 -14.58 0.00000507403 400 6 3 8 [+] picture button
SINFRUT00000148871 Homolog of Homo sapiens "PCTP-like protein [Source:IPI;Acc:IPI00478357]"
16.6236 -20.34 0.0000111404 400 5 1 4 [+] picture button
SRM SINFRUT00000152096 Spermidine synthase (EC 2.5.1.16) (Putrescine aminopropyltransferase) (SPDSY). [Source:Uniprot/SWISSPROT;Acc:P19623]
16.0749 -23.11 0.0000124319 400 6 2 7 [+] picture button
FAM84B (1 of 2) SINFRUT00000136076 Protein FAM84B (Protein NSE2) (Breast cancer membrane protein 101). [Source:Uniprot/SWISSPROT;Acc:Q96KN1]
15.9648 -17.25 0.0000382032 400 9 2 15 [+] picture button
ARFIP1 (1 of 3) SINFRUT00000138295 Arfaptin-1 (ADP-ribosylation factor-interacting protein 1). [Source:Uniprot/SWISSPROT;Acc:P53367]
15.9447 -12 0.0000412072 400 8 2 9 [+] picture button
C1orf77 SINFRUT00000141734 Uncharacterized protein C1orf77. [Source:Uniprot/SWISSPROT;Acc:Q9Y3Y2]
16.7355 -17.92 0.0000423564 400 5 1 10 [+] picture button
MRPS18B SINFRUT00000152972 28S ribosomal protein S18b, mitochondrial precursor (MRP-S18-b) (Mrps18b) (MRP-S18-2). [Source:Uniprot/SWISSPROT;Acc:Q9Y676]
16.4052 -20.37 0.0000477275 400 3 2 4 [+] picture button
Q6ZYN9_FUGRU SINFRUT00000158720 Alpha-2,6-sialyltransferase ST6GalNAc III (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q6ZYN9]
16.5153 -15.36 0.000056386 400 7 2 8 [+] picture button
MDH2 SINFRUT00000136061 Malate dehydrogenase, mitochondrial precursor (EC 1.1.1.37). [Source:Uniprot/SWISSPROT;Acc:P40926]
15.7446 -13.58 0.00009021 400 7 4 14 [+] picture button
TBKBP1 (1 of 2) SINFRUT00000152633 ProSAPiP2 protein [Source:RefSeq_peptide;Acc:NP_055541]
16.8456 -26.62 0.0000940602 400 11 3 13 [+] picture button
HOXA4 SINFRUT00000159072 Homeobox protein Hox-A4 (Hox-1D) (Hox-1.4). [Source:Uniprot/SWISSPROT;Acc:Q00056]
17.4943 -21.53 0.000109369 400 3 3 4 [+] picture button
DUSP26 (1 of 2) SINFRUT00000160758 dual specificity phosphatase 26 [Source:RefSeq_peptide;Acc:NP_076930]
17.6263 -23.72 0.000119131 400 7 1 7 [+] picture button
MYOHD1 SINFRUT00000141059 myosin head domain containing 1 isoform 1 [Source:RefSeq_peptide;Acc:NP_079385]
15.7446 -11.59 0.000142126 400 5 1 7 [+] picture button
ASCL4 SINFRUT00000178360 achaete-scute complex-like 4 [Source:RefSeq_peptide;Acc:NP_982260]
15.0839 -14.58 0.00015071 400 5 2 5 [+] picture button
Q6E5T4_FUGRU SINFRUT00000152236 Claudin 2. [Source:Uniprot/SPTREMBL;Acc:Q6E5T4]
18.8274 -19.58 0.000157155 400 4 1 5 [+] picture button
ADCY3 (2 of 2) SINFRUT00000130220 Adenylate cyclase type 3 (EC 4.6.1.1) (Adenylate cyclase type III) (ATP pyrophosphate-lyase 3) (Adenylyl cyclase 3) (AC-III) (AC3) (Adenylate cyclase, olfactive type). [Source:Uniprot/SWISSPROT;Acc:O60266]
16.4935 -18.28 0.0001616 400 7 2 9 [+] picture button
SLC2A4 SINFRUT00000158885 Solute carrier family 2, facilitated glucose transporter member 4 (Glucose transporter type 4, insulin-responsive). [Source:Uniprot/SWISSPROT;Acc:P14672]
15.6825 -14.47 0.000171114 400 3 3 4 [+] picture button
COX7AP2 SINFRUT00000161469 Cytochrome c oxidase subunit VIIa 3, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:O60397]
17.3961 -21.65 0.000175707 400 5 1 5 [+] picture button
DSCR3 SINFRUT00000131512 Down syndrome critical region protein 3 (Down syndrome critical region protein A). [Source:Uniprot/SWISSPROT;Acc:O14972]
18.1668 -22.72 0.000181581 400 5 1 6 [+] picture button
SLC27A6 SINFRUT00000182387 Long-chain fatty acid transport protein 6 (Fatty acid transport protein 6) (FATP-6) (Very long-chain acyl-CoA synthetase homolog 1) (VLCSH1) (hVLCS-H1) (Fatty-acid-coenzyme A ligase, very long-chain 2) (Solute carrier family 27 member 6). [Source:Uniprot/SWISSPROT;Acc:Q9Y2P4]
15.8547 -12.54 0.0002306 400 6 1 7 [+] picture button
GART SINFRUT00000132027 Trifunctional purine biosynthetic protein adenosine-3 [Includes: Phosphoribosylamine--glycine ligase (EC 6.3.4.13) (GARS) (Glycinamide ribonucleotide synthetase) (Phosphoribosylglycinamide synthetase); Phosphoribosylformylglycinamidine cyclo-ligase (EC 6. [Source:Uniprot/SWISSPROT;Acc:P22102]
15.194 -16.25 0.0002596 400 11 2 14 [+] picture button
FTSJ3 SINFRUT00000175844 Putative rRNA methyltransferase 3 (EC 2.1.1.-) (rRNA (uridine-2'-O-)- methyltransferase 3). [Source:Uniprot/SWISSPROT;Acc:Q8IY81]
15.793 -13.71 0.000300349 400 7 2 9 [+] picture button
IL18BP SINFRUT00000163402 Calcium/calmodulin-dependent 3',5'-cyclic nucleotide phosphodiesterase 1A (EC 3.1.4.17) (Cam-PDE 1A) (61 kDa Cam-PDE) (hCam-1). [Source:Uniprot/SWISSPROT;Acc:P54750]
15.0855 -14.41 0.000341107 400 5 1 9 [+] picture button
NP_001027778.1 SINFRUT00000140941 multiple tissue opsin [Source:RefSeq_peptide;Acc:NP_001027778]
15.559 -16.67 0.000354772 400 2 2 2 [+] picture button
SAPS3 SINFRUT00000164941 SAPS domain family, member 3 [Source:RefSeq_peptide;Acc:NP_060782]
15.7446 -18.15 0.000370314 400 8 2 9 [+] picture button
RNF152 SINFRUT00000128356 RING finger protein 152. [Source:Uniprot/SWISSPROT;Acc:Q8N8N0]
17.1284 -23.31 0.000373741 400 5 2 6 [+] picture button
INPP1 SINFRUT00000144238 Inositol polyphosphate 1-phosphatase (EC 3.1.3.57) (IPPase) (IPP). [Source:Uniprot/SWISSPROT;Acc:P49441]
18.9179 -28.99 0.000408565 400 4 2 4 [+] picture button
TAF6L SINFRUT00000147414 TAF6-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 6L (PCAF-associated factor 65 alpha) (PAF65- alpha). [Source:Uniprot/SWISSPROT;Acc:Q9Y6J9]
15.9648 -12.71 0.000424056 400 10 3 11 [+] picture button
GOLPH3 SINFRUT00000143696 Golgi phosphoprotein 3 (Coat-protein GPP34). [Source:Uniprot/SWISSPROT;Acc:Q9H4A6]
17.286 -25.31 0.000463901 400 5 2 5 [+] picture button
SINFRUT00000151278 NOT ANNOTATED
18.1668 -18.72 0.000465914 400 6 1 4 [+] picture button
HTATIP2 SINFRUT00000145716 Oxidoreductase HTATIP2 (EC 1.1.1.-) (HIV-1 TAT-interactive protein 2) (30 kDa HIV-1 TAT-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9BUP3]
17.0273 -18.28 0.00047027 400 5 2 6 [+] picture button
PKP2 SINFRUT00000133627 Plakophilin-2. [Source:Uniprot/SWISSPROT;Acc:Q99959]
15.3732 -8.78 0.000494352 400 7 3 10 [+] picture button
SMYD3 SINFRUT00000140344 SET and MYND domain-containing protein 3 (EC 2.1.1.43) (Zinc finger MYND domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9H7B4]
15.3073 -20.86 0.000539561 400 3 1 3 [+] picture button
KCNJ2 (2 of 2) SINFRUT00000137388 Inward rectifier potassium channel 2 (Potassium channel, inwardly rectifying subfamily J member 2) (Inward rectifier K(+) channel Kir2.1) (Cardiac inward rectifier potassium channel) (IRK1). [Source:Uniprot/SWISSPROT;Acc:P63252]
15.5243 -17.11 0.000592429 400 6 1 16 [+] picture button
EIF3S7 SINFRUT00000171420 Eukaryotic translation initiation factor 3 subunit 7 (eIF-3 zeta) (eIF3 p66) (eIF3d). [Source:Uniprot/SWISSPROT;Acc:O15371]
15.1631 -16.52 0.000629791 400 3 1 4 [+] picture button
GCNT3 SINFRUT00000181794 glucosaminyl (N-acetyl) transferase 3, mucin type [Source:RefSeq_peptide;Acc:NP_004742]
15.194 -15.51 0.000641283 400 5 1 5 [+] picture button
Q7T3S9_FUGRU SINFRUT00000135485 Corticotrophin releasing factor receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T3S9]
16.9283 -17.83 0.000648883 400 6 3 8 [+] picture button
EP400 SINFRUT00000128848 E1A-binding protein p400 (EC 3.6.1.-) (p400 kDa SWI2/SNF2-related protein) (Domino homolog) (hDomino) (CAG repeat protein 32) (Trinucleotide repeat-containing gene 12 protein). [Source:Uniprot/SWISSPROT;Acc:Q96L91]
16.221 -14.74 0.000657554 400 8 3 10 [+] picture button
NP_115661.1 SINFRUT00000176817 Homolog of Homo sapiens "MGC3207 protein [Source:IPI;Acc:IPI00005948]"
17.1525 -19.13 0.000698928 400 6 2 7 [+] picture button
PDE6C (2 of 2) SINFRUT00000181463 Cone cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha' (EC 3.1.4.35) (cGMP phosphodiesterase 6C). [Source:Uniprot/SWISSPROT;Acc:P51160]
15.4142 -16.59 0.000715352 400 7 2 10 [+] picture button
HS3ST5 SINFRUT00000153861 Heparan sulfate glucosamine 3-O-sulfotransferase 5 (EC 2.8.2.23) (Heparan sulfate D-glucosaminyl 3-O-sulfotransferase 5) (Heparan sulfate 3-O-sulfotransferase 5) (h3-OST-5). [Source:Uniprot/SWISSPROT;Acc:Q8IZT8]
15.3119 -13.73 0.000724962 400 6 2 13 [+] picture button
SCFD2 SINFRUT00000140430 Sec1 family domain-containing protein 2 (Syntaxin-binding protein 1- like 1). [Source:Uniprot/SWISSPROT;Acc:Q8WU76]
15.3041 -14.65 0.000730698 400 5 2 6 [+] picture button
PCBD1 SINFRUT00000131151 Pterin-4-alpha-carbinolamine dehydratase (EC 4.2.1.96) (PHS) (4-alpha- hydroxy-tetrahydropterin dehydratase) (Phenylalanine hydroxylase- stimulating protein) (Pterin carbinolamine dehydratase) (PCD) (Dimerization cofactor of hepatocyte nuclear factor 1-al [Source:Uniprot/SWISSPROT;Acc:P61457]
15.8547 -15.98 0.000731431 400 8 3 9 [+] picture button
ALDH1L1 SINFRUT00000163952 10-formyltetrahydrofolate dehydrogenase (EC 1.5.1.6) (10-FTHFDH) (Aldehyde dehydrogenase 1 family member L1). [Source:Uniprot/SWISSPROT;Acc:O75891]
16.2186 -20.23 0.000764427 400 10 2 10 [+] picture button
MCM9 SINFRUT00000142137 minichromosome maintenance protein domain containing 1 [Source:RefSeq_peptide;Acc:NP_694987]
15.3119 -17.15 0.000764808 400 4 1 7 [+] picture button
NP_001073969.1 SINFRUT00000180302 similar to CRiM (Cysteine RIch motor neuron protein) homolog family member (crm-1) [Source:RefSeq_peptide;Acc:NP_001073969]
16.5153 -17.29 0.00076838 400 6 2 7 [+] picture button
ZC3HC1 SINFRUT00000168627 Nuclear-interacting partner of ALK (Nuclear-interacting partner of anaplastic lymphoma kinase) (hNIPA) (Zinc finger C3HC-type protein 1). [Source:Uniprot/SWISSPROT;Acc:Q86WB0]
15.0839 -15.1 0.000803236 400 6 1 6 [+] picture button
MCAT SINFRUT00000147505 Malonyl CoA-acyl carrier protein transacylase, mitochondrial precursor (EC 2.3.1.39) (MCT) (Mitochondrial malonyltransferase). [Source:Uniprot/SWISSPROT;Acc:Q8IVS2]
16.7355 -11.41 0.00080574 400 8 1 8 [+] picture button

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Download table: GFF TXT
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