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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-18

740 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NEDD9 SINFRUT00000152401 Enhancer of filamentation 1 (HEF1) (CRK-associated substrate-related protein) (CAS-L) (CasL) (p105) (Protein NEDD9) (Renal carcinoma antigen NY-REN-12). [Source:Uniprot/SWISSPROT;Acc:Q14511]
16.8456 -16.81 0.000000000128591 400 3 3 7 [+] picture button
ANUBL1 SINFRUT00000149221 AN1-type zinc finger and ubiquitin domain-containing protein 1 (AN1- type zinc finger protein 4). [Source:Uniprot/SWISSPROT;Acc:Q86XD8]
17.5502 -23.23 0.00000000562866 400 6 3 14 [+] picture button
PTPN4 SINFRUT00000128597 Tyrosine-protein phosphatase non-receptor type 4 (EC 3.1.3.48) (Protein-tyrosine phosphatase MEG1) (PTPase-MEG1) (MEG). [Source:Uniprot/SWISSPROT;Acc:P29074]
17.1245 -20.92 0.00000000920268 400 6 4 13 [+] picture button
BAMBI SINFRUT00000143916 BMP and activin membrane-bound inhibitor homolog precursor (Putative transmembrane protein NMA) (Non-metastatic gene A protein). [Source:Uniprot/SWISSPROT;Acc:Q13145]
16.9371 -20.17 0.0000000126642 400 5 13 14 [+] picture button
FBXL7 SINFRUT00000140108 F-box/LRR-repeat protein 7 (F-box and leucine-rich repeat protein 7) (F-box protein FBL6/FBL7). [Source:Uniprot/SWISSPROT;Acc:Q9UJT9]
16.7345 -18.85 0.0000000215846 400 8 3 16 [+] picture button
TMEM64 SINFRUT00000182242 transmembrane protein 64 [Source:RefSeq_peptide;Acc:NP_001008495]
17.0821 -15.95 0.0000000290032 400 10 5 14 [+] picture button
SMAD2 SINFRUT00000167872 Mothers against decapentaplegic homolog 2 (SMAD 2) (Mothers against DPP homolog 2) (Mad-related protein 2) (hMAD-2) (JV18-1) (hSMAD2). [Source:Uniprot/SWISSPROT;Acc:Q15796]
17.5903 -18.63 0.0000000313699 400 5 4 12 [+] picture button
WEE1 SINFRUT00000136340 Wee1-like protein kinase (EC 2.7.10.2) (Wee1A kinase) (WEE1hu). [Source:Uniprot/SWISSPROT;Acc:P30291]
17.9466 -22.13 0.000000066518 400 6 2 12 [+] picture button
C11orf30 SINFRUT00000177248 Protein EMSY. [Source:Uniprot/SWISSPROT;Acc:Q7Z589]
16.185 -15.23 0.0000000935425 400 3 2 10 [+] picture button
Q8AV23_FUGRU SINFRUT00000160115 FZF2. [Source:Uniprot/SPTREMBL;Acc:Q8AV23]
16.8602 -18.27 0.000000108636 400 7 4 23 [+] picture button
ARID4B SINFRUT00000148622 AT-rich interactive domain-containing protein 4B (ARID domain- containing protein 4B) (Histone deacetylase complex subunit SAP180) (180 kDa Sin3-associated polypeptide) (Sin3-associated polypeptide p180) (Retinoblastoma-binding protein 1-like 1) (Breast c [Source:Uniprot/SWISSPROT;Acc:Q4LE39]
17.5062 -19.04 0.00000046294 400 4 11 10 [+] picture button
PKNOX1 SINFRUT00000169432 Homeobox protein PKNOX1 (PBX/knotted homeobox 1) (Homeobox protein PREP-1). [Source:Uniprot/SWISSPROT;Acc:P55347]
16.2889 -15.75 0.00000047414 400 5 4 7 [+] picture button
LIMA1 SINFRUT00000146356 LIM domain and actin-binding protein 1 (Epithelial protein lost in neoplasm). [Source:Uniprot/SWISSPROT;Acc:Q9UHB6]
16.1224 -15.26 0.000000590131 400 7 1 11 [+] picture button
ALAS2 SINFRUT00000181410 5-aminolevulinate synthase, erythroid-specific, mitochondrial precursor (EC 2.3.1.37) (5-aminolevulinic acid synthase) (Delta- aminolevulinate synthase) (Delta-ALA synthetase) (ALAS-E). [Source:Uniprot/SWISSPROT;Acc:P22557]
16.5153 -17.93 0.00000060863 400 5 3 15 [+] picture button
SINFRUT00000179988 NOT ANNOTATED
17.7377 -28.3 0.000001 400 10 1 3 [+] picture button
SINFRUT00000179051 NOT ANNOTATED
16.2951 -21.17 0.000001 400 10 1 6 [+] picture button
APRIN (1 of 3) SINFRUT00000132946 androgen-induced prostate proliferative shutoff associated protein [Source:RefSeq_peptide;Acc:NP_055847]
16.7355 -20.03 0.000001 400 12 1 9 [+] picture button
TSG101 SINFRUT00000166265 Tumor susceptibility gene 101 protein. [Source:Uniprot/SWISSPROT;Acc:Q99816]
17.7264 -18.69 0.00000106284 400 6 3 11 [+] picture button
PCK1 SINFRUT00000148926 Phosphoenolpyruvate carboxykinase, cytosolic [GTP] (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-C). [Source:Uniprot/SWISSPROT;Acc:P35558]
17.0569 -17.15 0.00000171381 400 4 2 8 [+] picture button
MAP3K2 SINFRUT00000141140 Mitogen-activated protein kinase kinase kinase 2 (EC 2.7.11.25) (MAPK/ERK kinase kinase 2) (MEK kinase 2) (MEKK 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y2U5]
19.9284 -21.98 0.00000173467 400 6 4 7 [+] picture button
OBFC2A SINFRUT00000127690 oligonucleotide/oligosaccharide-binding fold containing 2A [Source:RefSeq_peptide;Acc:NP_001026886]
17.9641 -20.18 0.0000021175 400 5 2 11 [+] picture button
MICAL2 (1 of 2) SINFRUT00000145166 Protein MICAL-2. [Source:Uniprot/SWISSPROT;Acc:O94851]
18.428 -23.62 0.00000255868 400 5 3 7 [+] picture button
Q6E0H0_FUGRU SINFRUT00000180351 Wnt8.2 protein. [Source:Uniprot/SPTREMBL;Acc:Q6E0H0]
17.3961 -19.66 0.00000256332 400 4 3 12 [+] picture button
RIC8B SINFRUT00000164753 Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B). [Source:Uniprot/SWISSPROT;Acc:Q9NVN3]
16.9119 -16.61 0.00000258894 400 3 1 4 [+] picture button
Q9W698_FUGRU SINFRUT00000155239 1-aminocyclopropane-carboxilate synthase. [Source:Uniprot/SPTREMBL;Acc:Q9W698]
17.3961 -16.57 0.00000263098 400 3 3 6 [+] picture button
GALNT14 SINFRUT00000146874 Polypeptide N-acetylgalactosaminyltransferase 14 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 14) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 14) (Polypeptide GalNAc transferase 14) (GalNAc-T14) (pp-GaNTase 14). [Source:Uniprot/SWISSPROT;Acc:Q96FL9]
16.5153 -16.86 0.00000306092 400 5 2 5 [+] picture button
DDHD1 SINFRUT00000149473 Probable phospholipase DDHD1 (EC 3.1.1.-) (DDHD domain protein 1) (Phosphatidic acid-preferring phospholipase A1 homolog) (PA-PLA1). [Source:Uniprot/SWISSPROT;Acc:Q8NEL9]
17.3245 -19.16 0.00000308982 400 4 6 5 [+] picture button
FBXL5 SINFRUT00000130615 F-box/LRR-repeat protein 5 (F-box and leucine-rich repeat protein 5) (F-box protein FBL4/FBL5) (p45SKP2-like protein). [Source:Uniprot/SWISSPROT;Acc:Q9UKA1]
16.8256 -16.89 0.00000444008 400 7 4 12 [+] picture button
SLC35E1 SINFRUT00000157770 Solute carrier family 35 member E1. [Source:Uniprot/SWISSPROT;Acc:Q96K37]
18.1377 -16.29 0.00000485609 400 8 2 9 [+] picture button
HES1 SINFRUT00000148304 Transcription factor HES-1 (Hairy and enhancer of split 1) (Hairy- like) (HHL) (Hairy homolog). [Source:Uniprot/SWISSPROT;Acc:Q14469]
18.154 -22.15 0.00000497785 400 4 5 11 [+] picture button
SMAD7 SINFRUT00000168711 Mothers against decapentaplegic homolog 7 (SMAD 7) (Mothers against DPP homolog 7) (Smad7) (hSMAD7). [Source:Uniprot/SWISSPROT;Acc:O15105]
17.5052 -18.7 0.00000560548 400 5 9 15 [+] picture button
TNKS (1 of 2) SINFRUT00000143424 Tankyrase-1 (EC 2.4.2.30) (TANK1) (Tankyrase I) (TNKS-1) (TRF1- interacting ankyrin-related ADP-ribose polymerase). [Source:Uniprot/SWISSPROT;Acc:O95271]
18.2331 -20.29 0.00000619747 400 5 2 7 [+] picture button
SSH2 SINFRUT00000130254 Protein phosphatase Slingshot homolog 2 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-2L) (hSSH-2L). [Source:Uniprot/SWISSPROT;Acc:Q76I76]
17.2084 -19.93 0.00000710607 400 6 3 8 [+] picture button
IKBKG (1 of 2) SINFRUT00000178390 NF-kappa-B essential modulator (NEMO) (NF-kappa-B essential modifier) (Inhibitor of nuclear factor kappa-B kinase subunit gamma) (IkB kinase subunit gamma) (I-kappa-B kinase gamma) (IKK-gamma) (IKKG) (IkB kinase-associated protein 1) (IKKAP1) (FIP-3). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K9]
17.0181 -17.7 0.00000864973 400 7 3 11 [+] picture button
DDX5 (2 of 2) SINFRUT00000165391 Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-) (DEAD box protein 5) (RNA helicase p68). [Source:Uniprot/SWISSPROT;Acc:P17844]
16.2627 -13.87 0.00000937015 400 6 12 12 [+] picture button
SYBU_HUMAN SINFRUT00000129850 Syntabulin (Syntaxin-1-binding protein) (Golgi-localized syntaphilin- related protein). [Source:Uniprot/SWISSPROT;Acc:Q9NX95]
16.2951 -18.85 0.00000948972 400 6 5 14 [+] picture button
COQ10A SINFRUT00000182706 Protein COQ10 A, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q96MF6]
18.3062 -16.54 0.0000107905 400 4 2 3 [+] picture button
KIAA0494 SINFRUT00000157240 Uncharacterized calcium-binding protein KIAA0494. [Source:Uniprot/SWISSPROT;Acc:O75071]
17.4349 -15.41 0.0000119669 400 5 3 10 [+] picture button
SKAP2 SINFRUT00000166844 Src kinase-associated phosphoprotein 2 (Src family-associated phosphoprotein 2) (Src kinase-associated phosphoprotein 55-related protein) (SKAP55 homolog) (SKAP-HOM) (SKAP-55HOM) (Src-associated adapter protein with PH and SH3 domains) (Pyk2/RAFTK-associa [Source:Uniprot/SWISSPROT;Acc:O75563]
17.052 -13.87 0.000012213 400 6 2 12 [+] picture button
RGMB SINFRUT00000148370 RGM domain family member B precursor. [Source:Uniprot/SWISSPROT;Acc:Q6NW40]
17.219 -13.78 0.0000142178 400 8 2 18 [+] picture button
GPS2 SINFRUT00000158868 G protein pathway suppressor 2 (Protein GPS2). [Source:Uniprot/SWISSPROT;Acc:Q13227]
17.1076 -18.47 0.0000160663 400 4 3 10 [+] picture button
PLSCR3 SINFRUT00000158899 Phospholipid scramblase 3 (PL scramblase 3) (Ca(2+)-dependent phospholipid scramblase 3). [Source:Uniprot/SWISSPROT;Acc:Q9NRY6]
16.4052 -14.89 0.0000161956 400 8 2 13 [+] picture button
DDEF2 SINFRUT00000136346 Development and differentiation-enhancing factor 2 (Pyk2 C-terminus- associated protein) (PAP) (Paxillin-associated protein with ARFGAP activity 3) (PAG3). [Source:Uniprot/SWISSPROT;Acc:O43150]
16.7355 -12.71 0.0000162457 400 5 2 12 [+] picture button
OPTN SINFRUT00000172035 Optineurin (Optic neuropathy-inducing protein) (E3-14.7K-interacting protein) (FIP-2) (Huntingtin-interacting protein HYPL) (NEMO-related protein) (Transcription factor IIIA-interacting protein) (TFIIIA- IntP). [Source:Uniprot/SWISSPROT;Acc:Q96CV9]
16.8456 -16.36 0.0000164225 400 6 2 7 [+] picture button
USP20 SINFRUT00000176611 Ubiquitin carboxyl-terminal hydrolase 20 (EC 3.1.2.15) (Ubiquitin thioesterase 20) (Ubiquitin-specific-processing protease 20) (Deubiquitinating enzyme 20). [Source:Uniprot/SWISSPROT;Acc:Q9Y2K6]
17.9917 -18.03 0.0000193185 400 4 1 4 [+] picture button
MDM4 SINFRUT00000171861 Mdm4 protein (p53-binding protein Mdm4) (Mdm2-like p53-binding protein) (Mdmx protein) (Double minute 4 protein). [Source:Uniprot/SWISSPROT;Acc:O15151]
17.7962 -18.73 0.0000208833 400 6 2 11 [+] picture button
GPR63 SINFRUT00000181772 Probable G-protein coupled receptor 63 (PSP24-beta) (PSP24-2). [Source:Uniprot/SWISSPROT;Acc:Q9BZJ6]
17.8064 -17.11 0.0000211397 400 4 2 4 [+] picture button
FBXL4 SINFRUT00000164295 F-box/LRR-repeat protein 4 (F-box and leucine-rich repeat protein 4) (F-box protein FBL4/FBL5). [Source:Uniprot/SWISSPROT;Acc:Q9UKA2]
16.2951 -19.13 0.000026351 400 7 4 8 [+] picture button
TAS1R1 SINFRUT00000168275 Taste receptor type 1 member 1 precursor (G-protein coupled receptor 70). [Source:Uniprot/SWISSPROT;Acc:Q7RTX1]
16.5153 -15.85 0.0000311806 400 6 3 11 [+] picture button
GPS1 SINFRUT00000152152 COP9 signalosome complex subunit 1 (Signalosome subunit 1) (SGN1) (JAB1-containing signalosome subunit 1) (G protein pathway suppressor 1) (Protein GPS1) (Protein MFH). [Source:Uniprot/SWISSPROT;Acc:Q13098]
17.8365 -20.93 0.000031744 400 4 4 9 [+] picture button

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Download table: GFF TXT
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