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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-16

689 hits found.


Page 1 of 14
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CAB39 SINFRUT00000137605 Calcium-binding protein 39 (Protein Mo25). [Source:Uniprot/SWISSPROT;Acc:Q9Y376]
16.5695 -12.05 2.00656e-08 400 8 6 12 [+] picture button
EDA SINFRUT00000153078 Ectodysplasin-A (Ectodermal dysplasia protein) (EDA protein) [Contains: Ectodysplasin-A, membrane form; Ectodysplasin-A, secreted form]. [Source:Uniprot/SWISSPROT;Acc:Q92838]
16.8456 -17.12 3.47022e-08 400 3 3 6 [+] picture button
TMEM55A SINFRUT00000179323 Transmembrane protein 55A (EC 3.1.3.-) (Type II phosphatidylinositol 4,5-bisphosphate 4-phosphatase) (PtdIns-4,5-P2 4-Ptase II). [Source:Uniprot/SWISSPROT;Acc:Q8N4L2]
17.5106 -15.15 5.85244e-08 400 6 2 11 [+] picture button
COLQ (1 of 2) SINFRUT00000146399 Acetylcholinesterase collagenic tail peptide precursor (AChE Q subunit) (Acetylcholinesterase-associated collagen). [Source:Uniprot/SWISSPROT;Acc:Q9Y215]
17.6421 -15.57 6.15929e-08 400 2 4 4 [+] picture button
SINFRUT00000163736 NOT ANNOTATED
17.8365 -21.79 1e-06 400 9 1 6 [+] picture button
ZNF318 SINFRUT00000140094 Zinc finger protein 318 (Endocrine regulatory protein). [Source:Uniprot/SWISSPROT;Acc:Q5VUA4]
16.9418 -20.16 1e-06 400 7 1 5 [+] picture button
SLC7A4 SINFRUT00000136276 Cationic amino acid transporter 4 (CAT-4) (CAT4). [Source:Uniprot/SWISSPROT;Acc:O43246]
17.6163 -16.34 1.57311e-06 400 4 4 6 [+] picture button
SVEP1 SINFRUT00000128123 polydom [Source:RefSeq_peptide;Acc:NP_699197]
16.6254 -13.49 5.16793e-06 400 8 6 12 [+] picture button
ENO1P SINFRUT00000150208 Ectodysplasin A receptor-associated adapter protein (EDAR-associated death domain protein) (Crinkled homolog). [Source:Uniprot/SWISSPROT;Acc:Q8WWZ3]
18.1349 -20.89 6.45458e-06 400 4 2 9 [+] picture button
SINFRUT00000132712 cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141]cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141] BY ORTHOLOGY TO:ENSMUST00000046609
17.7424 -18.26 7.31674e-06 400 5 1 10 [+] picture button
SINFRUT00000131318 Homolog of Homo sapiens "Splice Isoform 1 of SH3 adapter protein SPIN90 [Source:IPI;Acc:IPI00009319]"
16.7355 -13.21 8.39054e-06 400 5 1 7 [+] picture button
WIPI2 SINFRUT00000163581 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2) (WIPI49-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y4P8]
16.6583 -20.71 9.4951e-06 400 5 9 10 [+] picture button
EI2BB_FUGRU SINFRUT00000133481 Translation initiation factor eIF-2B beta subunit (eIF-2B GDP-GTP exchange factor) (S20I15). [Source:Uniprot/SWISSPROT;Acc:Q90511]
17.1356 -18.77 9.7028e-06 400 5 1 9 [+] picture button
NF2 SINFRUT00000171045 Merlin (Moesin-ezrin-radixin-like protein) (Neurofibromin-2) (Schwannomin) (Schwannomerlin). [Source:Uniprot/SWISSPROT;Acc:P35240]
16.7355 -14.24 1.14378e-05 400 9 1 15 [+] picture button
WDR20 (1 of 2) SINFRUT00000150158 WD repeat protein 20 (DMR protein). [Source:Uniprot/SWISSPROT;Acc:Q8TBZ3]
18.4687 -20.69 1.34396e-05 400 4 4 7 [+] picture button
EIF5 SINFRUT00000177881 Eukaryotic translation initiation factor 5 (eIF-5). [Source:Uniprot/SWISSPROT;Acc:P55010]
16.6236 -16.25 1.35184e-05 400 6 2 8 [+] picture button
HIATL1 (1 of 2) SINFRUT00000154090 Hippocampus abundant transcript-like protein 1. [Source:Uniprot/SWISSPROT;Acc:Q5SR56]
16.9557 -13.17 1.44101e-05 400 4 2 7 [+] picture button
SDF4 SINFRUT00000131026 45 kDa calcium-binding protein precursor (Cab45) (Stromal cell-derived factor 4) (SDF-4). [Source:Uniprot/SWISSPROT;Acc:Q9BRK5]
17.1759 -17.91 2.24169e-05 400 5 1 7 [+] picture button
SINFRUT00000149176 Homolog of Carassius auratus "Glucagon-like peptide 1 receptor. [Source:Uniprot/SPTREMBL;Acc:Q5EFJ9]"
17.6163 -22.59 2.32564e-05 400 5 2 6 [+] picture button
CPEB2 SINFRUT00000130634 Cytoplasmic polyadenylation element-binding protein 2 (CPE-binding protein 2) (CPE-BP2) (hCPEB-2). [Source:Uniprot/SWISSPROT;Acc:Q7Z5Q1]
17.9853 -13.3 2.92334e-05 400 6 5 11 [+] picture button
PSCD2 SINFRUT00000138756 Cytohesin-2 (PH, SEC7 and coiled-coil domain-containing protein 2) (ARF nucleotide-binding site opener) (Protein ARNO) (ARF exchange factor). [Source:Uniprot/SWISSPROT;Acc:Q99418]
17.1759 -13.29 2.97464e-05 400 3 2 5 [+] picture button
OTUD6A SINFRUT00000176907 OTU domain-containing protein 6A. [Source:Uniprot/SWISSPROT;Acc:Q7L8S5]
17.1759 -14.88 3.16019e-05 400 6 2 9 [+] picture button
FAM54B SINFRUT00000157177 family with sequence similarity 54, member B (FAM54B), mRNA [Source:RefSeq_dna;Acc:NM_019557]
17.4447 -16.11 3.71011e-05 400 9 3 14 [+] picture button
TH SINFRUT00000148525 Tyrosine 3-monooxygenase (EC 1.14.16.2) (Tyrosine 3-hydroxylase) (TH). [Source:Uniprot/SWISSPROT;Acc:P07101]
17.0658 -20.44 4.04472e-05 400 4 2 5 [+] picture button
DLL1 (1 of 2) SINFRUT00000158918 Delta-like protein 1 precursor (Drosophila Delta homolog 1) (Delta1) (H-Delta-1). [Source:Uniprot/SWISSPROT;Acc:O00548]
17.3961 -17.98 4.18112e-05 400 5 4 6 [+] picture button
LARS2 SINFRUT00000153679 Probable leucyl-tRNA synthetase, mitochondrial precursor (EC 6.1.1.4) (Leucine--tRNA ligase) (LeuRS). [Source:Uniprot/SWISSPROT;Acc:Q15031]
16.7728 -17.05 4.4225e-05 400 7 2 15 [+] picture button
NM_002430.2 SINFRUT00000177980 meningioma (disrupted in balanced translocation) 1 (MN1), mRNA [Source:RefSeq_dna;Acc:NM_002430]
17.5651 -16.92 4.84553e-05 400 8 2 12 [+] picture button
OSBPL1A (2 of 2) SINFRUT00000165195 Oxysterol-binding protein-related protein 1 (OSBP-related protein 1) (ORP-1). [Source:Uniprot/SWISSPROT;Acc:Q9BXW6]
17.9866 -16.22 5.1194e-05 400 9 2 14 [+] picture button
CEP192 SINFRUT00000171337 centrosomal protein 192kDa [Source:RefSeq_peptide;Acc:NP_115518]
17.5062 -12.01 5.28318e-05 400 5 1 9 [+] picture button
MTX3 SINFRUT00000151178 metaxin 3 [Source:RefSeq_peptide;Acc:NP_001010891]
16.8456 -12.37 5.7215e-05 400 4 1 5 [+] picture button
RND2 (1 of 2) SINFRUT00000161787 Rho-related GTP-binding protein RhoN precursor (Rho family GTPase 2) (Rnd2) (Rho7). [Source:Uniprot/SWISSPROT;Acc:P52198]
16.9611 -19.54 6.03614e-05 400 5 3 7 [+] picture button
C10orf46 SINFRUT00000137764 Uncharacterized protein C10orf46. [Source:Uniprot/SWISSPROT;Acc:Q86Y37]
16.7144 -16.64 6.18104e-05 400 5 4 12 [+] picture button
IK SINFRUT00000178350 Protein Red (Protein RER) (IK factor) (Cytokine IK). [Source:Uniprot/SWISSPROT;Acc:Q13123]
16.6254 -14.42 6.56772e-05 400 8 1 7 [+] picture button
RRAGB SINFRUT00000150511 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
16.8842 -12.91 6.89284e-05 400 10 3 21 [+] picture button
RFK SINFRUT00000127858 Riboflavin kinase (EC 2.7.1.26) (ATP:riboflavin 5'-phosphotransferase) (Flavokinase). [Source:Uniprot/SWISSPROT;Acc:Q969G6]
16.7355 -15.08 6.94163e-05 400 2 1 5 [+] picture button
XR_016355.1 SINFRUT00000136886 similar to Ssu72 RNA polymerase II CTD phosphatase homolog (LOC643263), mRNA [Source:RefSeq_dna;Acc:XR_016355]
17.0658 -13.2 7.06314e-05 400 5 2 7 [+] picture button
LRSAM1 SINFRUT00000140741 E3 ubiquitin-protein ligase LRSAM1 (EC 6.3.2.-) (Leucine-rich repeat and sterile alpha motif-containing protein 1) (Tsg101-associated ligase) (hTAL). [Source:Uniprot/SWISSPROT;Acc:Q6UWE0]
17.1183 -18.48 8.67412e-05 400 8 2 16 [+] picture button
PIR SINFRUT00000161974 Pirin. [Source:Uniprot/SWISSPROT;Acc:O00625]
17.8365 -17.95 8.77305e-05 400 6 1 11 [+] picture button
NCAPH SINFRUT00000146512 Condensin complex subunit 2 (Non-SMC condensin I complex subunit H) (Barren homolog protein 1) (Chromosome-associated protein H) (hCAP-H) (XCAP-H homolog). [Source:Uniprot/SWISSPROT;Acc:Q15003]
17.4349 -14.34 8.80073e-05 400 2 1 3 [+] picture button
LEPR SINFRUT00000160667 Leptin receptor precursor (LEP-R) (OB receptor) (OB-R) (HuB219) (CD295 antigen). [Source:Uniprot/SWISSPROT;Acc:P48357]
16.5648 -12.94 9.91768e-05 400 5 3 10 [+] picture button
POLR3D SINFRUT00000149049 DNA-directed RNA polymerase III subunit D (EC 2.7.7.6) (DNA-directed RNA polymerase III 47 kDa polypeptide) (RNA polymerase C subunit 4) (RPC4) (RPC53) (Protein BN51). [Source:Uniprot/SWISSPROT;Acc:P05423]
17.943 -15.67 0.000112871 400 8 2 11 [+] picture button
TKTL2 SINFRUT00000145381 transketolase-like 2 [Source:RefSeq_peptide;Acc:NP_115512]
16.6254 -12.14 0.000123209 400 5 1 8 [+] picture button
KLC2 SINFRUT00000157262 Kinesin light chain 2 (KLC 2). [Source:Uniprot/SWISSPROT;Acc:Q9H0B6]
17.1388 -13.75 0.000142504 400 5 2 6 [+] picture button
CSMD2 SINFRUT00000182027 CUB and sushi domain-containing protein 2 (CUB and sushi multiple domains protein 2). [Source:Uniprot/SWISSPROT;Acc:Q7Z408]
16.6624 -10.94 0.000166673 400 6 2 7 [+] picture button
SINFRUT00000144226 Homolog of Homo sapiens "EEF1D protein [Source:IPI;Acc:IPI00064086]"
17.5062 -21.97 0.000168964 400 3 4 6 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
16.7564 -22.87 0.000172545 400 4 12 5 [+] picture button
SNRK SINFRUT00000139095 SNF-related serine/threonine-protein kinase (EC 2.7.11.1) (SNF1- related kinase). [Source:Uniprot/SWISSPROT;Acc:Q9NRH2]
18.6592 -20.07 0.000173331 400 3 2 6 [+] picture button
VPS13A SINFRUT00000154593 Vacuolar protein sorting-associated protein 13A (Chorein) (Chorea- acanthocytosis protein). [Source:Uniprot/SWISSPROT;Acc:Q96RL7]
17.4898 -14.27 0.000186784 400 6 2 12 [+] picture button
RAI2 SINFRUT00000174260 Retinoic acid-induced protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9Y5P3]
16.7643 -15.48 0.000203059 400 7 2 13 [+] picture button
SINFRUT00000182194 NOT ANNOTATED
19.9668 -21.62 0.00021777 400 8 1 11 [+] picture button

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Download table: GFF TXT
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