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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-148

853 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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DYNLL2 SINFRUT00000183595 Dynein light chain 2, cytoplasmic (Dynein light chain LC8-type 2). [Source:Uniprot/SWISSPROT;Acc:Q96FJ2]
18.1434 -15.65 0.00000000512357 400 4 10 4 [+] picture button
CCDC85B SINFRUT00000134405 Delta-interacting protein A (Hepatitis delta antigen-interacting protein A) (Coiled-coil domain-containing protein 85B). [Source:Uniprot/SWISSPROT;Acc:Q15834]
19.5425 -14.78 0.0000000109778 400 8 4 13 [+] picture button
TBX3 SINFRUT00000140299 T-box transcription factor TBX3 (T-box protein 3). [Source:Uniprot/SWISSPROT;Acc:O15119]
17.2734 -17.32 0.00000011744 400 5 4 10 [+] picture button
NIPA2 SINFRUT00000159255 Non-imprinted in Prader-Willi/Angelman syndrome region protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8N8Q9]
17.3961 -15.12 0.000000211258 400 6 10 8 [+] picture button
COL4A1 SINFRUT00000178676 Collagen alpha-1(IV) chain precursor (Arresten). [Source:Uniprot/SWISSPROT;Acc:P02462]
17.7264 -16.45 0.000000476466 400 6 4 8 [+] picture button
ABCB7 SINFRUT00000152662 ATP-binding cassette sub-family B member 7, mitochondrial precursor (ATP-binding cassette transporter 7) (ABC transporter 7 protein). [Source:Uniprot/SWISSPROT;Acc:O75027]
16.185 -15.92 0.00000164402 400 5 3 7 [+] picture button
DNAJC8 SINFRUT00000160921 DnaJ homolog subfamily C member 8 (Splicing protein spf31). [Source:Uniprot/SWISSPROT;Acc:O75937]
16.6335 -14.77 0.00000165319 400 4 1 5 [+] picture button
Q86XQ1_HUMAN SINFRUT00000158750 XTP9. [Source:Uniprot/SPTREMBL;Acc:Q86XQ1]
16.5851 -15.37 0.0000018953 400 6 7 7 [+] picture button
BAI3 SINFRUT00000129349 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
18.0434 -18.36 0.00000317357 400 6 10 13 [+] picture button
MYEOV2 (2 of 2) SINFRUT00000155679 myeloma overexpressed 2 (MYEOV2), mRNA [Source:RefSeq_dna;Acc:NM_138336]
16.2951 -12.02 0.000004008 400 4 2 7 [+] picture button
ATOH7 SINFRUT00000137777 atonal homolog 7 [Source:RefSeq_peptide;Acc:NP_660161]
16.4417 -13.1 0.00000400943 400 8 3 14 [+] picture button
DEPDC1B SINFRUT00000175860 DEP domain-containing protein 1B (HBxAg-transactivated protein 8). [Source:Uniprot/SWISSPROT;Acc:Q8WUY9]
16.4052 -14.95 0.00000409445 400 8 4 10 [+] picture button
ENTPD2 SINFRUT00000163975 Ectonucleoside triphosphate diphosphohydrolase 2 (EC 3.6.1.-) (NTPDase 2) (Ecto-ATPase) (CD39 antigen-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y5L3]
16.2951 -17.45 0.0000055545 400 7 1 14 [+] picture button
DHODH SINFRUT00000132672 Dihydroorotate dehydrogenase, mitochondrial precursor (EC 1.3.3.1) (Dihydroorotate oxidase) (DHOdehase). [Source:Uniprot/SWISSPROT;Acc:Q02127]
16.3314 -12.89 0.0000058238 400 2 3 7 [+] picture button
EYA2 SINFRUT00000145923 Eyes absent homolog 2 (EC 3.1.3.48). [Source:Uniprot/SWISSPROT;Acc:O00167]
17.6577 -17.58 0.00000601184 400 10 4 12 [+] picture button
CYR61 SINFRUT00000139678 Protein CYR61 precursor (Cysteine-rich, angiogenic inducer, 61) (Insulin-like growth factor-binding protein 10) (Protein GIG1). [Source:Uniprot/SWISSPROT;Acc:O00622]
17.1759 -15.26 0.00000690443 400 5 6 9 [+] picture button
LAMA4 SINFRUT00000142294 Laminin subunit alpha-4 precursor. [Source:Uniprot/SWISSPROT;Acc:Q16363]
16.244 -13.77 0.00000696814 400 6 2 7 [+] picture button
ARHGAP26 SINFRUT00000151522 Rho GTPase-activating protein 26 (Oligophrenin-1-like protein) (GTPase regulator associated with focal adhesion kinase). [Source:Uniprot/SWISSPROT;Acc:Q9UNA1]
15.9648 -11.65 0.00000711292 400 4 3 5 [+] picture button
Q5KST8_FUGRU SINFRUT00000147954 Apolipoprotein E2. [Source:Uniprot/SPTREMBL;Acc:Q5KST8]
17.9466 -15.99 0.00000745619 400 2 4 3 [+] picture button
LMTK2 SINFRUT00000135332 Serine/threonine-protein kinase LMTK2 precursor (EC 2.7.11.1) (Lemur tyrosine kinase 2) (Serine/threonine protein kinase KPI-2) (Kinase/phosphatase/inhibitor 2) (Apoptosis-associated tyrosine kinase 2) (Brain-enriched kinase) (hBREK) (CDK5/p35-regulated k [Source:Uniprot/SWISSPROT;Acc:Q8IWU2]
16.221 -8.7 0.00000802149 400 6 4 12 [+] picture button
STYX SINFRUT00000159665 Serine/threonine/tyrosine-interacting protein (Protein tyrosine phosphatase-like protein). [Source:Uniprot/SWISSPROT;Acc:Q8WUJ0]
17.5062 -20.49 0.0000114822 400 10 6 17 [+] picture button
CYLD SINFRUT00000133231 Probable ubiquitin carboxyl-terminal hydrolase CYLD (EC 3.1.2.15) (Ubiquitin thioesterase CYLD) (Ubiquitin-specific-processing protease CYLD) (Deubiquitinating enzyme CYLD). [Source:Uniprot/SWISSPROT;Acc:Q9NQC7]
16.5153 -17.47 0.0000118752 400 7 7 20 [+] picture button
CDS2 SINFRUT00000157873 Phosphatidate cytidylyltransferase 2 (EC 2.7.7.41) (CDP-diglyceride synthetase 2) (CDP-diglyceride pyrophosphorylase 2) (CDP- diacylglycerol synthase 2) (CDS 2) (CTP:phosphatidate cytidylyltransferase 2) (CDP-DAG synthase 2) (CDP-DG synthetase 2). [Source:Uniprot/SWISSPROT;Acc:O95674]
17.8013 -14.94 0.0000151917 400 6 3 11 [+] picture button
EMILIN3 (2 of 2) SINFRUT00000155650 EMILIN-3 precursor (EMILIN-5) (Elastin microfibril interface-located protein 5) (Elastin microfibril interfacer 5). [Source:Uniprot/SWISSPROT;Acc:Q9NT22]
17.531 -18.91 0.0000152945 400 7 4 10 [+] picture button
FGF10 (2 of 2) SINFRUT00000143238 Fibroblast growth factor 10 precursor (FGF-10) (Keratinocyte growth factor 2). [Source:Uniprot/SWISSPROT;Acc:O15520]
18.387 -22.38 0.0000182493 400 4 3 7 [+] picture button
PDCD6IP SINFRUT00000153589 Programmed cell death 6-interacting protein (PDCD6-interacting protein) (ALG-2-interacting protein 1) (Hp95). [Source:Uniprot/SWISSPROT;Acc:Q8WUM4]
16.2256 -11.3 0.0000218864 400 7 3 10 [+] picture button
FAM54A SINFRUT00000138560 Protein FAM54A (DUF729 domain-containing protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6P444]
17.8365 -23.28 0.0000223454 400 6 3 8 [+] picture button
KCNA4 SINFRUT00000136825 Potassium voltage-gated channel subfamily A member 4 (Voltage-gated potassium channel subunit Kv1.4) (HK1) (HPCN2) (HBK4) (HUKII). [Source:Uniprot/SWISSPROT;Acc:P22459]
16.0912 -12.35 0.0000243973 400 3 4 9 [+] picture button
HOXA5 SINFRUT00000159074 Homeobox protein Hox-A5 (Hox-1C). [Source:Uniprot/SWISSPROT;Acc:P20719]
18.6072 -23.02 0.0000253578 400 5 6 8 [+] picture button
COL2A1 SINFRUT00000179596 Collagen alpha-1(II) chain precursor [Contains: Chondrocalcin]. [Source:Uniprot/SWISSPROT;Acc:P02458]
16.1773 -13.58 0.0000257644 400 3 2 4 [+] picture button
TMEM63B (2 of 3) SINFRUT00000173110 Transmembrane protein 63B. [Source:Uniprot/SWISSPROT;Acc:Q5T3F8]
17.8365 -16.68 0.0000269743 400 5 4 6 [+] picture button
SPATA13 SINFRUT00000158388 Spermatogenesis-associated protein 13. [Source:Uniprot/SWISSPROT;Acc:Q96N96]
17.0658 -15.22 0.0000281842 400 8 3 13 [+] picture button
TTC26 SINFRUT00000170083 tetratricopeptide repeat domain 26 [Source:RefSeq_peptide;Acc:NP_079202]
16.2951 -13.44 0.0000319112 400 4 2 9 [+] picture button
LSM8 SINFRUT00000137029 U6 snRNA-associated Sm-like protein LSm8. [Source:Uniprot/SWISSPROT;Acc:O95777]
17.286 -16.51 0.0000341139 400 6 2 9 [+] picture button
CDADC1 SINFRUT00000129631 cytidine and dCMP deaminase domain containing 1 [Source:RefSeq_peptide;Acc:NP_112173]
17.3961 -15.33 0.0000366205 400 6 2 11 [+] picture button
TIMM50 SINFRUT00000158106 Import inner membrane translocase subunit TIM50, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q3ZCQ8]
17.1759 -22.19 0.0000378589 400 5 1 8 [+] picture button
COL6A2 (2 of 2) SINFRUT00000145359 Collagen alpha-2(VI) chain precursor. [Source:Uniprot/SWISSPROT;Acc:P12110]
17.5502 -15.68 0.0000383542 400 4 3 7 [+] picture button
ITGA11 (1 of 2) SINFRUT00000129146 Integrin alpha-11 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9UKX5]
16.8456 -21.76 0.0000384088 400 8 4 12 [+] picture button
YEATS4 SINFRUT00000158585 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]
15.9648 -13.38 0.0000432168 400 6 1 9 [+] picture button
IGF2BP2 SINFRUT00000166483 Insulin-like growth factor 2 mRNA-binding protein 2 (IGF2 mRNA-binding protein 2) (IGF-II mRNA-binding protein 2) (IMP-2) (Hepatocellular carcinoma autoantigen p62) (VICKZ family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y6M1]
16.7355 -16.99 0.0000439413 400 4 8 8 [+] picture button
GTF2A1 SINFRUT00000145656 Transcription initiation factor IIA subunit 1 (General transcription factor IIA1) (TFIIA-42) (TFIIAL) [Contains: Transcription initiation factor IIA alpha chain (TFIIA p35 subunit); Transcription initiation factor IIA beta chain (TFIIA p19 subunit)]. [Source:Uniprot/SWISSPROT;Acc:P52655]
16.4005 -16.9 0.0000467126 400 3 2 5 [+] picture button
SINFRUT00000163149 Homolog of Brachydanio rerio "Noggin 2 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9W740]"
18.5087 -15.82 0.0000470854 400 6 4 19 [+] picture button
PGD SINFRUT00000146059 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44). [Source:Uniprot/SWISSPROT;Acc:P52209]
17.5062 -17.11 0.0000472442 400 7 3 11 [+] picture button
KPNA2 SINFRUT00000152877 Importin alpha-2 subunit (Karyopherin alpha-2 subunit) (SRP1-alpha) (RAG cohort protein 1). [Source:Uniprot/SWISSPROT;Acc:P52292]
16.3043 -17.09 0.0000535105 400 7 7 13 [+] picture button
Q6E5U1_FUGRU SINFRUT00000161105 Claudin 12. [Source:Uniprot/SPTREMBL;Acc:Q6E5U1]
17.0658 -19.16 0.0000538214 400 8 2 11 [+] picture button
PBXIP1 (2 of 2) SINFRUT00000145903 pre-B-cell leukemia transcription factor interacting protein 1 [Source:RefSeq_peptide;Acc:NP_065385]
17.0658 -18.72 0.0000551513 400 4 2 6 [+] picture button
DPH4 SINFRUT00000128243 DPH4 homolog (CSL-type zinc finger-containing protein 3). [Source:Uniprot/SWISSPROT;Acc:Q6P3W2]
16.1276 -14.64 0.0000577351 400 2 1 3 [+] picture button
CHORDC1 SINFRUT00000175723 cysteine and histidine-rich domain (CHORD)-containing, zinc binding protein 1 [Source:RefSeq_peptide;Acc:NP_036256]
18.2769 -14.42 0.0000580758 400 3 3 7 [+] picture button
USP47 SINFRUT00000145152 Ubiquitin carboxyl-terminal hydrolase 47 (EC 3.1.2.15) (Ubiquitin thioesterase 47) (Ubiquitin-specific-processing protease 47) (Deubiquitinating enzyme 47). [Source:Uniprot/SWISSPROT;Acc:Q96K76]
16.5153 -16.24 0.0000619355 400 7 10 14 [+] picture button
HSP90AB2P SINFRUT00000145961 Heat shock protein 90Bb. [Source:Uniprot/SPTREMBL;Acc:Q58FF8]
18.2769 -18.82 0.0000624509 400 9 4 19 [+] picture button

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Download table: GFF TXT
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