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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-142b

562 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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NFS1 SINFRUT00000142693 Cysteine desulfurase, mitochondrial precursor (EC 2.8.1.7). [Source:Uniprot/SWISSPROT;Acc:Q9Y697]
19.1577 -16.59 0.00000429031 400 5 4 6 [+] picture button
MITD1 SINFRUT00000163830 MIT domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8WV92]
17.1759 -5.91 0.00000487808 400 3 3 4 [+] picture button
C6orf167 SINFRUT00000137585 Uncharacterized protein C6orf167. [Source:Uniprot/SWISSPROT;Acc:Q6ZRQ5]
16.6254 -7.49 0.00000558625 400 4 2 7 [+] picture button
DCTN3 SINFRUT00000142937 Dynactin subunit 3 (Dynactin complex subunit 22 kDa subunit) (p22). [Source:Uniprot/SWISSPROT;Acc:O75935]
16.6254 -12.44 0.00000563357 400 5 2 6 [+] picture button
C18orf55 SINFRUT00000133188 TIM21-like protein, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BVV7]
16.4052 -7.41 0.0000102677 400 10 2 15 [+] picture button
CYP26A1 SINFRUT00000140036 Cytochrome P450 26A1 (EC 1.14.-.-) (Retinoic acid-metabolizing cytochrome) (P450 retinoic acid-inactivating 1) (P450RAI) (hP450RAI) (Retinoic acid 4-hydroxylase). [Source:Uniprot/SWISSPROT;Acc:O43174]
16.7318 -21.28 0.0000140873 400 6 3 9 [+] picture button
ACBD6 SINFRUT00000164182 Acyl-CoA-binding domain-containing protein 6. [Source:Uniprot/SWISSPROT;Acc:Q9BR61]
17.364 -15.22 0.0000143783 400 10 2 12 [+] picture button
BAI3 SINFRUT00000129349 Brain-specific angiogenesis inhibitor 3 precursor. [Source:Uniprot/SWISSPROT;Acc:O60242]
16.6986 -9.62 0.0000146988 400 6 10 13 [+] picture button
PRR16 SINFRUT00000162756 mesenchymal stem cell protein DSC54 [Source:RefSeq_peptide;Acc:NP_057728]
19.2183 -18.01 0.0000175407 400 10 11 18 [+] picture button
ZW10 SINFRUT00000131479 Centromere/kinetochore protein zw10 homolog. [Source:Uniprot/SWISSPROT;Acc:O43264]
17.5062 -12.86 0.0000229524 400 4 3 5 [+] picture button
CEBPB SINFRUT00000130331 CCAAT/enhancer-binding protein beta (C/EBP beta) (Nuclear factor NF- IL6) (Transcription factor 5). [Source:Uniprot/SWISSPROT;Acc:P17676]
17.5206 -8.36 0.0000255874 400 7 3 12 [+] picture button
Q98SK4_FUGRU SINFRUT00000166489 ST7 protein. [Source:Uniprot/SPTREMBL;Acc:Q98SK4]
19.8466 -14.84 0.0000258436 400 6 11 7 [+] picture button
GATAD1 SINFRUT00000164552 GATA zinc finger domain containing 1 [Source:RefSeq_peptide;Acc:NP_066990]
18.0965 -14.13 0.0000355602 400 3 1 5 [+] picture button
MMACHC SINFRUT00000138530 Methylmalonic aciduria and homocystinuria type C protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y4U1]
18.0567 -18.02 0.0000386176 400 6 2 9 [+] picture button
CCNB1 SINFRUT00000154336 G2/mitotic-specific cyclin-B1. [Source:Uniprot/SWISSPROT;Acc:P14635]
16.4052 -10.28 0.0000414054 400 4 3 5 [+] picture button
POLE2 SINFRUT00000150171 DNA polymerase epsilon subunit 2 (EC 2.7.7.7) (DNA polymerase II subunit 2) (DNA polymerase epsilon subunit B). [Source:Uniprot/SWISSPROT;Acc:P56282]
17.5062 -10.1 0.0000498615 400 4 2 7 [+] picture button
O75864_HUMAN SINFRUT00000130898 PREDICTED: Pan troglodytes similar to CDNA sequence BC024868 (LOC468916), mRNA. [Source:RefSeq_dna;Acc:XR_023882]PREDICTED: Pan troglodytes similar to CDNA sequence BC024868 (LOC468916), mRNA. [Source:RefSeq_dna;Acc:XR_023882] BY ORTHOLOGY TO:ENSPTRT00000020701
16.7355 -9.1 0.0000579936 400 2 1 2 [+] picture button
RHBDL2 SINFRUT00000168429 Rhomboid-related protein 2 (EC 3.4.21.105) (RRP2) (Rhomboid-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9NX52]
16.7247 -8.45 0.0000582591 400 3 1 4 [+] picture button
TSHZ3 (2 of 2) SINFRUT00000155952 Teashirt homolog 3 (Zinc finger protein 537). [Source:Uniprot/SWISSPROT;Acc:Q63HK5]
16.6483 -5.91 0.0000668152 400 7 4 12 [+] picture button
FAM120B SINFRUT00000158914 PPARgamma constitutive coactivator 1 [Source:RefSeq_peptide;Acc:NP_115824]
16.9557 -11.62 0.0000680816 400 5 2 6 [+] picture button
DCAKD SINFRUT00000164207 dephospho-CoA kinase domain containing [Source:RefSeq_peptide;Acc:NP_079095]
17.7264 -8.41 0.0000732025 400 3 1 3 [+] picture button
HP1BP3 SINFRUT00000161196 HP1-BP74 [Source:RefSeq_peptide;Acc:NP_057371]
16.6908 -14.31 0.0000767446 400 8 2 12 [+] picture button
MAP3K8 SINFRUT00000162585 Mitogen-activated protein kinase kinase kinase 8 (EC 2.7.11.25) (COT proto-oncogene serine/threonine-protein kinase) (C-COT) (Cancer Osaka thyroid oncogene). [Source:Uniprot/SWISSPROT;Acc:P41279]
18.1668 -11.78 0.0000806055 400 5 2 6 [+] picture button
MAP3K7IP2 SINFRUT00000141561 Mitogen-activated protein kinase kinase kinase 7-interacting protein 2 (TAK1-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9NYJ8]
18.0567 -13.54 0.0000865522 400 5 2 9 [+] picture button
RORA SINFRUT00000148149 Nuclear receptor ROR-alpha (Retinoid-related orphan receptor-alpha) (Nuclear receptor RZR-alpha). [Source:Uniprot/SWISSPROT;Acc:P35398]
16.7355 -8.36 0.0000934286 400 5 4 6 [+] picture button
PRMT2 SINFRUT00000133681 Protein arginine N-methyltransferase 2 (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:P55345]
16.5153 -17.33 0.000101685 400 6 2 9 [+] picture button
SCYL2 SINFRUT00000181525 SCY1-like protein 2 (Coated vesicle-associated kinase of 104 kDa). [Source:Uniprot/SWISSPROT;Acc:Q6P3W7]
18.0567 -12.57 0.000106818 400 3 4 5 [+] picture button
Q3SY89_HUMAN SINFRUT00000179932 Transcription elongation factor B polypeptide 3C (Elongin A3). [Source:Uniprot/SPTREMBL;Acc:Q3SY89]
18.5646 -14.27 0.000107678 400 5 1 7 [+] picture button
LIG4 SINFRUT00000162220 DNA ligase 4 (EC 6.5.1.1) (DNA ligase IV) (Polydeoxyribonucleotide synthase [ATP] 4). [Source:Uniprot/SWISSPROT;Acc:P49917]
17.286 -11.87 0.000108994 400 4 2 5 [+] picture button
LRRFIP2 SINFRUT00000135659 Leucine-rich repeat flightless-interacting protein 2 (LRR FLII- interacting protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y608]
16.7091 -8.67 0.000126019 400 4 2 5 [+] picture button
LRMP SINFRUT00000178366 Lymphoid-restricted membrane protein (Protein Jaw1). [Source:Uniprot/SWISSPROT;Acc:Q12912]
17.8365 -18.87 0.000126166 400 7 3 9 [+] picture button
ITK SINFRUT00000152778 Tyrosine-protein kinase ITK/TSK (EC 2.7.10.2) (T-cell-specific kinase) (Tyrosine-protein kinase Lyk) (Kinase EMT). [Source:Uniprot/SWISSPROT;Acc:Q08881]
16.6254 -7.07 0.000126248 400 5 2 6 [+] picture button
MUS81 SINFRUT00000158181 Crossover junction endonuclease MUS81 (EC 3.1.22.-). [Source:Uniprot/SWISSPROT;Acc:Q96NY9]
17.077 -13.89 0.00018485 400 5 2 14 [+] picture button
WHDC1 SINFRUT00000161941 WAS protein homology region 2 domain containing 1 [Source:RefSeq_peptide;Acc:NP_001073904]
16.5153 -8.27 0.000189271 400 5 2 7 [+] picture button
TLX3 SINFRUT00000131598 T-cell leukemia homeobox protein 3 (Homeobox protein Hox-11L2). [Source:Uniprot/SWISSPROT;Acc:O43711]
18.387 -13.96 0.000197115 400 5 2 4 [+] picture button
Q99543-2 SINFRUT00000144971 DNJC2_HUMAN Isoform 2 of Q99543 - Homo sapiens (Human) [Source:Uniprot/Varsplic;Acc:Q99543-2]
16.7355 -10.53 0.000203515 400 6 3 7 [+] picture button
MTX2 SINFRUT00000153158 Metaxin-2. [Source:Uniprot/SWISSPROT;Acc:O75431]
16.4052 -11.63 0.000257318 400 4 2 8 [+] picture button
FAM82B SINFRUT00000151994 Protein FAM82B. [Source:Uniprot/SWISSPROT;Acc:Q96DB5]
17.2734 -12.97 0.000257833 400 3 2 6 [+] picture button
TMEM165 SINFRUT00000133468 Transmembrane protein 165 (Transmembrane protein TPARL) (Transmembrane protein PT27). [Source:Uniprot/SWISSPROT;Acc:Q9HC07]
16.7355 -9.44 0.000273115 400 4 2 7 [+] picture button
SINFRUT00000182307 Homolog of Gallus gallus "RIM binding protein 2 (RIM-BP2). [Source:Uniprot/SWISSPROT;Acc:Q8QFX1]"
23.9203 -35.79 0.000277358 400 6 1 7 [+] picture button
HNRPD SINFRUT00000136506 Heterogeneous nuclear ribonucleoprotein D0 (hnRNP D0) (AU-rich element RNA-binding protein 1). [Source:Uniprot/SWISSPROT;Acc:Q14103]
17.9016 -14.67 0.000283514 400 4 1 5 [+] picture button
FGF23 SINFRUT00000181860 Fibroblast growth factor 23 precursor (FGF-23) (Tumor-derived hypophosphatemia-inducing factor). [Source:Uniprot/SWISSPROT;Acc:Q9GZV9]
18.6072 -14.65 0.000287338 400 5 2 7 [+] picture button
ATG4D SINFRUT00000139264 Cysteine protease ATG4D (EC 3.4.22.-) (Autophagy-related protein 4 homolog D) (Autophagin-4) (Autophagy-related cysteine endopeptidase 4) (AUT-like 4 cysteine endopeptidase). [Source:Uniprot/SWISSPROT;Acc:Q86TL0]
16.8974 -9.46 0.000288062 400 4 2 4 [+] picture button
C8orf70 SINFRUT00000174401 UPF0418 protein C8orf70. [Source:Uniprot/SWISSPROT;Acc:Q96GY0]
16.9557 -11.87 0.000293098 400 4 1 4 [+] picture button
C13orf34 SINFRUT00000140744 Protein aurora borealis (HsBora). [Source:Uniprot/SWISSPROT;Acc:Q6PGQ7]
18.075 -12.02 0.000320166 400 3 1 6 [+] picture button
PNPLA6 SINFRUT00000135019 neuropathy target esterase [Source:RefSeq_peptide;Acc:NP_006693]
16.7355 -12.25 0.000329384 400 5 2 6 [+] picture button
NP_001027815.1 SINFRUT00000139285 transcription factor Cbfa1 [Source:RefSeq_peptide;Acc:NP_001027815]
17.6163 -12.55 0.000333393 400 8 4 9 [+] picture button
MYOC (2 of 2) SINFRUT00000160044 Myocilin precursor (Trabecular meshwork-induced glucocorticoid response protein). [Source:Uniprot/SWISSPROT;Acc:Q99972]
17.7264 -8.89 0.000347399 400 7 2 8 [+] picture button
HCRTR1 SINFRUT00000163192 Orexin receptor type 1 (Ox1r) (Hypocretin receptor type 1). [Source:Uniprot/SWISSPROT;Acc:O43613]
17.1759 -10.57 0.000349398 400 7 1 14 [+] picture button
ATAD5 SINFRUT00000179758 chromosome fragility associated gene 1 [Source:RefSeq_peptide;Acc:NP_079133]
18.4971 -19.06 0.00035405 400 5 2 7 [+] picture button

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Download table: GFF TXT
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