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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-135b

743 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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FOXN2 SINFRUT00000145732 Forkhead box protein N2 (Human T-cell leukemia virus enhancer factor). [Source:Uniprot/SWISSPROT;Acc:P32314]
19.9899 -18.35 1.73887e-17 400 6 4 6 [+] picture button
NR3C2 SINFRUT00000129848 Mineralocorticoid receptor (MR). [Source:Uniprot/SWISSPROT;Acc:P08235]
18.6912 -16.47 0.000000000816856 400 6 11 5 [+] picture button
SLC24A5 SINFRUT00000133125 Sodium/potassium/calcium exchanger 5 precursor (Na(+)/K(+)/Ca(2+)- exchange protein 5) (Solute carrier family 24 member 5). [Source:Uniprot/SWISSPROT;Acc:Q71RS6]
17.0658 -16.42 0.000000168934 400 4 2 4 [+] picture button
WAC (1 of 2) SINFRUT00000143911 WW domain-containing adapter protein with coiled-coil. [Source:Uniprot/SWISSPROT;Acc:Q9BTA9]
18.2073 -16.97 0.000000307583 400 4 12 4 [+] picture button
NPAT SINFRUT00000159873 nuclear protein, ataxia-telangiectasia locus [Source:RefSeq_peptide;Acc:NP_002510]
17.8365 -17.69 0.000000806406 400 6 4 8 [+] picture button
ESRRA SINFRUT00000138848 Steroid hormone receptor ERR1 (Estrogen-related receptor, alpha) (ERR- alpha) (Estrogen receptor-like 1). [Source:Uniprot/SWISSPROT;Acc:P11474]
16.8456 -11.97 0.00000117353 400 5 4 5 [+] picture button
VPS26A SINFRUT00000130236 Vacuolar protein sorting-associated protein 26A (Vesicle protein sorting 26A) (hVPS26). [Source:Uniprot/SWISSPROT;Acc:O75436]
17.9466 -14.89 0.00000129551 400 5 2 7 [+] picture button
ATPBD1B SINFRUT00000153726 ATP-binding domain 1 family member B. [Source:Uniprot/SWISSPROT;Acc:Q9H9Y4]
18.1668 -12.86 0.00000150168 400 7 4 7 [+] picture button
SEC31A SINFRUT00000136524 SEC31 homolog A isoform 4 [Source:RefSeq_peptide;Acc:NP_001070674]
16.0749 -12.99 0.00000355679 400 3 2 4 [+] picture button
ANLN SINFRUT00000172687 Actin-binding protein anillin. [Source:Uniprot/SWISSPROT;Acc:Q9NQW6]
19.0962 -22.38 0.00000713039 400 4 2 11 [+] picture button
PAK1IP1 SINFRUT00000145394 p21-activated protein kinase-interacting protein 1 (PAK1-interacting protein 1) (PAK/PLC-interacting protein 1) (hPIP1) (WD repeat protein 84). [Source:Uniprot/SWISSPROT;Acc:Q9NWT1]
17.7264 -20.85 0.00000786602 400 4 2 6 [+] picture button
BNIP2 SINFRUT00000132680 BCL2/adenovirus E1B 19 kDa protein-interacting protein 2. [Source:Uniprot/SWISSPROT;Acc:Q12982]
18.1434 -18.04 0.00000822031 400 3 2 4 [+] picture button
NP_001073985.1 SINFRUT00000169539 similar to glutaredoxin cysteine-rich 1 protein [Source:RefSeq_peptide;Acc:NP_001073985]
16.7794 -9.6 0.00000850395 400 4 1 5 [+] picture button
ATXN7 SINFRUT00000130104 Ataxin-7 (Spinocerebellar ataxia type 7 protein). [Source:Uniprot/SWISSPROT;Acc:O15265]
16.0461 -9.71 0.0000106076 400 3 4 4 [+] picture button
NP_056263.1 SINFRUT00000166533 DPCD protein [Source:RefSeq_peptide;Acc:NP_056263]
16.2951 -11.73 0.0000176794 400 6 2 6 [+] picture button
DHRS3 SINFRUT00000133225 Short-chain dehydrogenase/reductase 3 (EC 1.1.-.-) (Retinal short- chain dehydrogenase/reductase 1) (retSDR1) (DD83.1). [Source:Uniprot/SWISSPROT;Acc:O75911]
16.4005 -12.09 0.0000197616 400 5 2 6 [+] picture button
CCNB2 SINFRUT00000142729 G2/mitotic-specific cyclin-B2. [Source:Uniprot/SWISSPROT;Acc:O95067]
16.5226 -18.53 0.0000225902 400 6 2 6 [+] picture button
C1orf96 SINFRUT00000158949 Uncharacterized protein C1orf96. [Source:Uniprot/SWISSPROT;Acc:Q6IQ19]
16.6766 -11.31 0.0000230537 400 7 4 9 [+] picture button
PCK2 SINFRUT00000132788 Phosphoenolpyruvate carboxykinase [GTP], mitochondrial precursor (EC 4.1.1.32) (Phosphoenolpyruvate carboxylase) (PEPCK-M). [Source:Uniprot/SWISSPROT;Acc:Q16822]
17.8167 -20.39 0.0000231823 400 7 2 11 [+] picture button
E2F2 SINFRUT00000161895 Transcription factor E2F2 (E2F-2). [Source:Uniprot/SWISSPROT;Acc:Q14209]
17.1336 -9.84 0.0000259361 400 2 2 7 [+] picture button
FTHL17 SINFRUT00000151380 Ferritin heavy polypeptide-like 17. [Source:Uniprot/SWISSPROT;Acc:Q9BXU8]
16.6254 -10.84 0.0000276297 400 5 2 8 [+] picture button
O57430_FUGRU SINFRUT00000138874 Gamma-aminobutyric acid receptor beta subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:O57430]
16.8726 -17.49 0.000030002 400 7 5 7 [+] picture button
GLI2 (1 of 2) SINFRUT00000159280 Zinc finger protein GLI2 (Tax helper protein). [Source:Uniprot/SWISSPROT;Acc:P10070]
17.286 -11.22 0.0000317474 400 6 2 9 [+] picture button
HTATIP2 SINFRUT00000145716 Oxidoreductase HTATIP2 (EC 1.1.1.-) (HIV-1 TAT-interactive protein 2) (30 kDa HIV-1 TAT-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9BUP3]
17.2485 -14.97 0.0000353723 400 5 2 6 [+] picture button
SYDE1 SINFRUT00000127072 synapse defective 1, Rho GTPase, homolog 1 [Source:RefSeq_peptide;Acc:NP_149014]
16.9557 -13.1 0.000036003 400 7 4 17 [+] picture button
PANK1 SINFRUT00000142595 Pantothenate kinase 1 (EC 2.7.1.33) (Pantothenic acid kinase 1) (hPanK1) (hPanK). [Source:Uniprot/SWISSPROT;Acc:Q8TE04]
17.0658 -12.44 0.0000388157 400 5 2 6 [+] picture button
EPOR SINFRUT00000143529 Erythropoietin receptor precursor (EPO-R). [Source:Uniprot/SWISSPROT;Acc:P19235]
16.1198 -15.19 0.0000426506 400 4 2 5 [+] picture button
Q99687-2 SINFRUT00000169647 Meis1, myeloid ecotropic viral integration site 1 homolog 3 isoform 1 [Source:RefSeq_peptide;Acc:NP_064545]
16.4257 -14.91 0.0000475899 400 6 4 8 [+] picture button
AUTS2 SINFRUT00000133677 Autism susceptibility gene 2 protein. [Source:Uniprot/SWISSPROT;Acc:Q8WXX7]
16.8734 -14.69 0.0000504162 400 5 3 10 [+] picture button
WISP3 SINFRUT00000142301 WNT1-inducible-signaling pathway protein 3 precursor (WISP-3). [Source:Uniprot/SWISSPROT;Acc:O95389]
16.8927 -14.05 0.0000519912 400 3 2 7 [+] picture button
LRRK2 SINFRUT00000135190 Leucine-rich repeat serine/threonine-protein kinase 2 (EC 2.7.11.1) (Dardarin). [Source:Uniprot/SWISSPROT;Acc:Q5S007]
16.1568 -16.31 0.0000542368 400 4 2 4 [+] picture button
FAM130A2 SINFRUT00000148330 TGF-beta-induced apoptosis protein 2 (TAIP-2). [Source:Uniprot/SWISSPROT;Acc:Q8WYN3]
17.2142 -12.79 0.0000571432 400 5 3 9 [+] picture button
CHAT (2 of 2) SINFRUT00000160802 Choline O-acetyltransferase (EC 2.3.1.6) (CHOACTase) (Choline acetylase) (ChAT). [Source:Uniprot/SWISSPROT;Acc:P28329]
18.7173 -19.35 0.0000605304 400 8 3 11 [+] picture button
SSH1 (2 of 2) SINFRUT00000155107 Protein phosphatase Slingshot homolog 1 (EC 3.1.3.48) (EC 3.1.3.16) (SSH-1L) (hSSH-1L). [Source:Uniprot/SWISSPROT;Acc:Q8WYL5]
17.3245 -12.48 0.0000647805 400 5 3 6 [+] picture button
C13orf27 SINFRUT00000151334 Uncharacterized protein C13orf27. [Source:Uniprot/SWISSPROT;Acc:Q5JUR7]
17.0224 -16.1 0.0000700913 400 5 2 8 [+] picture button
HEYL SINFRUT00000147276 hairy/enhancer-of-split related with YRPW motif-like [Source:RefSeq_peptide;Acc:NP_055386]
17.286 -14.84 0.0000702627 400 6 2 5 [+] picture button
STK25 SINFRUT00000158319 Serine/threonine-protein kinase 25 (EC 2.7.11.1) (Sterile 20/oxidant stress-response kinase 1) (Ste20/oxidant stress response kinase 1) (SOK-1) (Ste20-like kinase). [Source:Uniprot/SWISSPROT;Acc:O00506]
16.9557 -12.15 0.0000711203 400 6 4 6 [+] picture button
DMXL2 SINFRUT00000174375 Protein DmX-like 2 (Rabconnectin-3). [Source:Uniprot/SWISSPROT;Acc:Q8TDJ6]
16.2951 -14.55 0.0000746984 400 5 5 10 [+] picture button
ABCC2 SINFRUT00000171670 Canalicular multispecific organic anion transporter 1 (ATP-binding cassette sub-family C member 2) (Multidrug resistance-associated protein 2) (Canalicular multidrug resistance protein). [Source:Uniprot/SWISSPROT;Acc:Q92887]
17.9917 -12.41 0.0000752616 400 8 2 6 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
16.5153 -13.59 0.0000789351 400 4 2 7 [+] picture button
SINFRUT00000146529 Homolog of Brachydanio rerio "Zinc finger and BTB domain containing 1. [Source:Uniprot/SPTREMBL;Acc:Q6PUQ9]"
16.7355 -11.97 0.0000799326 400 5 4 7 [+] picture button
LOC729956 (2 of 2) SINFRUT00000148856 RIKEN cDNA D430041B17 gene [Source:MarkerSymbol;Acc:MGI:3605641]RIKEN cDNA D430041B17 gene [Source:MarkerSymbol;Acc:MGI:3605641] BY ORTHOLOGY TO:ENSMUST00000066041
17.6163 -12.34 0.0000801811 400 5 5 8 [+] picture button
GRHL1 SINFRUT00000170192 Grainyhead-like protein 1 homolog (Transcription factor CP2-like 2) (Transcription factor LBP-32) (NH32) (Mammalian grainyhead). [Source:Uniprot/SWISSPROT;Acc:Q9NZI5]
19.3528 -21.16 0.0000802356 400 5 3 12 [+] picture button
CYTL1 SINFRUT00000176941 Cytokine-like protein 1 precursor (Protein C17). [Source:Uniprot/SWISSPROT;Acc:Q9NRR1]
16.6714 -11.12 0.0000870512 400 4 3 5 [+] picture button
AIFM2 SINFRUT00000158126 Apoptosis-inducing factor 2 (EC 1.-.-.-) (Apoptosis-inducing factor- like mitochondrion-associated inducer of death) (Apoptosis-inducing factor-homologous mitochondrion-associated inducer of death) (p53- responsive gene 3 protein). [Source:Uniprot/SWISSPROT;Acc:Q9BRQ8]
16.7355 -11.43 0.0000870598 400 5 2 13 [+] picture button
ANKH SINFRUT00000142539 Progressive ankylosis protein homolog (ANK). [Source:Uniprot/SWISSPROT;Acc:Q9HCJ1]
18.3753 -20.73 0.0000893901 400 6 4 9 [+] picture button
NP_085139.2 SINFRUT00000139046 CDNA FLJ14480 fis, clone MAMMA1002215 (KIAA1706 protein). [Source:Uniprot/SPTREMBL;Acc:Q7L9B9]
16.0749 -7.96 0.0000925492 400 6 4 8 [+] picture button
KCNJ1 (1 of 2) SINFRUT00000163515 ATP-sensitive inward rectifier potassium channel 1 (Potassium channel, inwardly rectifying subfamily J member 1) (ATP-regulated potassium channel ROM-K) (Kir1.1). [Source:Uniprot/SWISSPROT;Acc:P48048]
16.4052 -11.26 0.000098633 400 8 1 6 [+] picture button
CRLF3 SINFRUT00000129458 cytokine receptor-like factor 3 [Source:RefSeq_peptide;Acc:NP_057070]
16.7355 -11.51 0.000126876 400 6 2 12 [+] picture button
SINFRUT00000145179 Homolog of Brachydanio rerio "EIF4G-related protein NAT1B. [Source:Uniprot/SPTREMBL;Acc:Q5KTT6]"
16.7775 -15.96 0.000131686 400 6 4 10 [+] picture button

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Download table: GFF TXT
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