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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-132

872 hits found.


Page 1 of 18
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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GRM3 SINFRUT00000129944 Metabotropic glutamate receptor 3 precursor (mGluR3). [Source:Uniprot/SWISSPROT;Acc:Q14832]
16.5128 -14.91 0.000000000221455 400 5 12 7 [+] picture button
NP_055530.2 SINFRUT00000140193 Rho GTPase-activating protein [Source:RefSeq_peptide;Acc:NP_055530]
18.1668 -20.62 0.00000000024519 400 7 12 10 [+] picture button
SAP30L SINFRUT00000131762 Sin3A associated protein p30-like [Source:RefSeq_peptide;Acc:NP_078908]
17.3561 -15.34 0.0000000139294 400 5 10 6 [+] picture button
VPS13A SINFRUT00000154593 Vacuolar protein sorting-associated protein 13A (Chorein) (Chorea- acanthocytosis protein). [Source:Uniprot/SWISSPROT;Acc:Q96RL7]
18.0433 -17.04 0.0000000708163 400 6 2 12 [+] picture button
Q6WNS0_FUGRU SINFRUT00000160314 Transcription factor Sox5. [Source:Uniprot/SPTREMBL;Acc:Q6WNS0]
16.2674 -12.09 0.000000345637 400 4 10 6 [+] picture button
USP9X SINFRUT00000135733 Probable ubiquitin carboxyl-terminal hydrolase FAF-X (EC 3.1.2.15) (Ubiquitin thioesterase FAF-X) (Ubiquitin-specific-processing protease FAF-X) (Deubiquitinating enzyme FAF-X) (Fat facets protein-related, X- linked) (Ubiquitin-specific protease 9, X chro [Source:Uniprot/SWISSPROT;Acc:Q93008]
17.3491 -13.17 0.000000941741 400 7 9 9 [+] picture button
MUSK SINFRUT00000152947 Muscle, skeletal receptor tyrosine protein kinase precursor (EC 2.7.10.1) (Muscle-specific tyrosine protein kinase receptor) (Muscle-specific kinase receptor) (MuSK). [Source:Uniprot/SWISSPROT;Acc:O15146]
16.0749 -15 0.00000133728 400 5 1 8 [+] picture button
SLC25A14 SINFRUT00000143795 Brain mitochondrial carrier protein 1 (BMCP-1) (Mitochondrial uncoupling protein 5) (UCP 5) (Solute carrier family 25 member 14). [Source:Uniprot/SWISSPROT;Acc:O95258]
17.7264 -18.05 0.00000340697 400 4 5 8 [+] picture button
UTP14A SINFRUT00000139604 U3 small nucleolar RNA-associated protein 14 homolog A (Antigen NY-CO- 16). [Source:Uniprot/SWISSPROT;Acc:Q9BVJ6]
17.9466 -19.55 0.00000404355 400 7 1 8 [+] picture button
DENND4A (2 of 2) SINFRUT00000137191 C-myc promoter-binding protein (DENN domain-containing protein 4A). [Source:Uniprot/SWISSPROT;Acc:Q7Z401]
17.4727 -19.71 0.00000642919 400 9 2 11 [+] picture button
CAMTA1 SINFRUT00000182811 Calmodulin-binding transcription activator 1. [Source:Uniprot/SWISSPROT;Acc:Q9Y6Y1]
17.3245 -17.82 0.00000650306 400 5 2 8 [+] picture button
SETD1B SINFRUT00000165579 SET domain-containing protein 1B (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q9UPS6]
16.487 -12.55 0.0000127396 400 3 5 5 [+] picture button
SINFRUT00000135831 Homolog of Brachydanio rerio "Ras-dva small GTPase. [Source:Uniprot/SPTREMBL;Acc:Q5XWT8]"
16.4792 -14.29 0.0000151486 400 7 2 11 [+] picture button
MTHFD2 SINFRUT00000150733 Bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial precursor [Includes: NAD-dependent methylenetetrahydrofolate dehydrogenase (EC 1.5.1.15); Methenyltetrahydrofolate cyclohydrolase (EC 3.5.4.9)]. [Source:Uniprot/SWISSPROT;Acc:P13995]
15.7797 -13.53 0.0000158616 400 5 4 19 [+] picture button
TYW3 SINFRUT00000160151 tRNA wybutosine-synthesizing protein 3 homolog (EC 2.1.1.-). [Source:Uniprot/SWISSPROT;Acc:Q6IPR3]
17.5852 -22.87 0.000015955 400 4 3 8 [+] picture button
SLC9A1 (1 of 2) SINFRUT00000127921 Sodium/hydrogen exchanger 1 (Na(+)/H(+) exchanger 1) (NHE-1) (Solute carrier family 9 member 1) (Na(+)/H(+) antiporter, amiloride- sensitive) (APNH). [Source:Uniprot/SWISSPROT;Acc:P19634]
19.0476 -21.65 0.0000164851 400 5 3 6 [+] picture button
ACTR10 SINFRUT00000144611 Actin-related protein 10 (hARP11). [Source:Uniprot/SWISSPROT;Acc:Q9NZ32]
16.8927 -13.95 0.0000206547 400 3 2 6 [+] picture button
AP4E1 SINFRUT00000132389 AP-4 complex subunit epsilon-1 (Adapter-related protein complex 4 epsilon-1 subunit) (Epsilon subunit of AP-4) (AP-4 adapter complex epsilon subunit). [Source:Uniprot/SWISSPROT;Acc:Q9UPM8]
16.6254 -12.89 0.0000265314 400 7 3 10 [+] picture button
RPS6KC1 SINFRUT00000144656 Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96S38]
19.2678 -22.64 0.0000304104 400 6 4 11 [+] picture button
IL20RA SINFRUT00000164976 Interleukin-20 receptor alpha chain precursor (IL-20R-alpha) (IL-20R1) (Cytokine receptor family 2 member 8) (Cytokine receptor class-II member 8) (CRF2-8) (ZcytoR7). [Source:Uniprot/SWISSPROT;Acc:Q9UHF4]
16.2951 -15.85 0.000031404 400 10 1 19 [+] picture button
PTGES2 SINFRUT00000148451 Prostaglandin E synthase 2 (EC 5.3.99.3) (Microsomal prostaglandin E synthase 2) (mPGES-2) [Contains: Prostaglandin E synthase 2 truncated form]. [Source:Uniprot/SWISSPROT;Acc:Q9H7Z7]
16.185 -13.23 0.0000352505 400 5 2 7 [+] picture button
ALDH16A1 SINFRUT00000140578 aldehyde dehydrogenase 16 family, member A1 [Source:RefSeq_peptide;Acc:NP_699160]
16.0003 -16 0.0000357755 400 5 2 10 [+] picture button
Q9BZU6_HUMAN SINFRUT00000160189 PNAS-13. [Source:Uniprot/SPTREMBL;Acc:Q9BZU6]
17.9483 -16.92 0.0000367861 400 8 2 14 [+] picture button
NUDCD3 SINFRUT00000145355 NudC domain-containing protein 3. [Source:Uniprot/SWISSPROT;Acc:Q8IVD9]
17.0658 -16.24 0.0000373902 400 6 2 7 [+] picture button
MRPL10 SINFRUT00000139386 39S ribosomal protein L10, mitochondrial precursor (L10mt) (MRP-L10). [Source:Uniprot/SWISSPROT;Acc:Q7Z7H8]
18.387 -19.41 0.0000480354 400 5 2 7 [+] picture button
NP_073574.1 SINFRUT00000161666 lipid phosphate phosphatase-related protein type 2 [Source:RefSeq_peptide;Acc:NP_073574]
16.6254 -16.05 0.0000531487 400 5 4 6 [+] picture button
WDR79 SINFRUT00000160271 WD repeat protein 79. [Source:Uniprot/SWISSPROT;Acc:Q9BUR4]
17.5062 -13.65 0.0000532983 400 5 1 7 [+] picture button
STOX2 (1 of 2) SINFRUT00000160400 storkhead box 2 [Source:RefSeq_peptide;Acc:NP_064610]
17.0645 -21.69 0.0000580956 400 4 3 5 [+] picture button
DGCR2 SINFRUT00000165582 Integral membrane protein DGCR2/IDD precursor. [Source:Uniprot/SWISSPROT;Acc:P98153]
16.6937 -21.96 0.0000587034 400 2 1 5 [+] picture button
C11orf46 SINFRUT00000136828 Uncharacterized protein C11orf46. [Source:Uniprot/SWISSPROT;Acc:Q8N8R7]
16.8753 -17.02 0.0000590953 400 8 1 10 [+] picture button
GAS1 (2 of 2) SINFRUT00000179440 Growth-arrest-specific protein 1 precursor (GAS-1). [Source:Uniprot/SWISSPROT;Acc:P54826]
16.2951 -19.49 0.0000616272 400 4 2 9 [+] picture button
NR4A2 SINFRUT00000144980 Orphan nuclear receptor NR4A2 (Orphan nuclear receptor NURR1) (Immediate-early response protein NOT) (Transcriptionally-inducible nuclear receptor). [Source:Uniprot/SWISSPROT;Acc:P43354]
16.0933 -13.41 0.0000659411 400 2 3 3 [+] picture button
B4GALT1 SINFRUT00000177547 Beta-1,4-galactosyltransferase 1 (EC 2.4.1.-) (Beta-1,4-GalTase 1) (Beta4Gal-T1) (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine beta- 1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc beta-1,4- galactosyltransferase 1) [Includes: Lactose synthase A pr [Source:Uniprot/SWISSPROT;Acc:P15291]
17.5062 -16.58 0.0000672141 400 8 3 15 [+] picture button
CDCA4 SINFRUT00000147300 Cell division cycle-associated protein 4 (Hematopoietic progenitor protein). [Source:Uniprot/SWISSPROT;Acc:Q9BXL8]
17.6907 -18.59 0.0000679121 400 5 4 8 [+] picture button
MYBBP1A SINFRUT00000167727 Myb-binding protein 1A. [Source:Uniprot/SWISSPROT;Acc:Q9BQG0]
16.7355 -13.92 0.0000701358 400 6 1 10 [+] picture button
PPP1R3D SINFRUT00000178214 Protein phosphatase 1 regulatory subunit 3D (Protein phosphatase 1, regulatory subunit 6) (Protein phosphatase 1-binding subunit R6). [Source:Uniprot/SWISSPROT;Acc:O95685]
16.7845 -16.78 0.0000750713 400 4 2 12 [+] picture button
YTHDC2 SINFRUT00000157215 YTH domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9H6S0]
16.5153 -14.82 0.0000803507 400 8 2 12 [+] picture button
TBC1D4 SINFRUT00000160242 TBC1 domain family member 4 (Akt substrate of 160 kDa) (AS160). [Source:Uniprot/SWISSPROT;Acc:O60343]
16.8456 -12.8 0.0000900678 400 6 4 14 [+] picture button
NXN SINFRUT00000156387 nucleoredoxin [Source:RefSeq_peptide;Acc:NP_071908]
17.7659 -22.05 0.0000960741 400 7 7 11 [+] picture button
Q659G3_HUMAN SINFRUT00000158938 SRP9 protein. [Source:Uniprot/SPTREMBL;Acc:Q6P2S0]
16.2951 -18.74 0.000102946 400 6 2 8 [+] picture button
TM7SF4 SINFRUT00000130745 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
17.286 -17.87 0.00010725 400 8 3 10 [+] picture button
ACVR1 (2 of 2) SINFRUT00000129728 Activin receptor type-1 precursor (EC 2.7.11.30) (Activin receptor type I) (ACTR-I) (Serine/threonine-protein kinase receptor R1) (SKR1) (Activin receptor-like kinase 2) (ALK-2) (TGF-B superfamily receptor type I) (TSR-I). [Source:Uniprot/SWISSPROT;Acc:Q04771]
17.0592 -19.59 0.000109105 400 7 2 10 [+] picture button
ZBTB12 SINFRUT00000166071 Zinc finger and BTB domain-containing protein 12 (Protein G10). [Source:Uniprot/SWISSPROT;Acc:Q9Y330]
17.5601 -19.11 0.000114667 400 3 1 5 [+] picture button
C19orf2 SINFRUT00000158204 RNA polymerase II subunit 5-mediating protein (RPB5-mediating protein). [Source:Uniprot/SWISSPROT;Acc:O94763]
16.7355 -19.44 0.000120595 400 6 3 9 [+] picture button
HNRPL SINFRUT00000144658 Heterogeneous nuclear ribonucleoprotein L (hnRNP L). [Source:Uniprot/SWISSPROT;Acc:P14866]
16.2302 -12.62 0.000122069 400 7 3 11 [+] picture button
PSMD7 SINFRUT00000136251 26S proteasome non-ATPase regulatory subunit 7 (26S proteasome regulatory subunit rpn8) (26S proteasome regulatory subunit S12) (Proteasome subunit p40) (Mov34 protein homolog). [Source:Uniprot/SWISSPROT;Acc:P51665]
16.2664 -13.75 0.000124459 400 6 4 6 [+] picture button
SCAP SINFRUT00000148155 Sterol regulatory element-binding protein cleavage-activating protein (SREBP cleavage-activating protein) (SCAP). [Source:Uniprot/SWISSPROT;Acc:Q12770]
16.8456 -15.36 0.000129271 400 7 3 7 [+] picture button
COPS3 (2 of 2) SINFRUT00000127438 COP9 signalosome complex subunit 3 (Signalosome subunit 3) (SGN3) (JAB1-containing signalosome subunit 3). [Source:Uniprot/SWISSPROT;Acc:Q9UNS2]
16.0368 -15.04 0.000134141 400 7 4 9 [+] picture button
BACH1 (2 of 2) SINFRUT00000161409 Transcription regulator protein BACH1 (BTB and CNC homolog 1) (HA2303). [Source:Uniprot/SWISSPROT;Acc:O14867]
16.3314 -12.51 0.000134622 400 6 2 6 [+] picture button
IARS SINFRUT00000164103 Isoleucyl-tRNA synthetase, cytoplasmic (EC 6.1.1.5) (Isoleucine--tRNA ligase) (IleRS) (IRS). [Source:Uniprot/SWISSPROT;Acc:P41252]
16.4863 -13.9 0.000149085 400 7 3 8 [+] picture button

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Download table: GFF TXT
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