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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-126

692 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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RARRES1 SINFRUT00000172759 Retinoic acid receptor responder protein 1 (Tazarotene-induced gene 1 protein) (RAR-responsive protein TIG1). [Source:Uniprot/SWISSPROT;Acc:P49788]
16.9702 -21.92 2.94209e-07 400 2 4 4 [+] picture button
MYB SINFRUT00000180334 Myb proto-oncogene protein (C-myb). [Source:Uniprot/SWISSPROT;Acc:P10242]
14.9112 -10.33 4.59385e-07 400 3 10 5 [+] picture button
LRP12 SINFRUT00000138975 Low-density lipoprotein receptor-related protein 12 precursor (Suppressor of tumorigenicity protein 7). [Source:Uniprot/SWISSPROT;Acc:Q9Y561]
16.0829 -17.39 4.67071e-07 400 6 2 5 [+] picture button
F3 (1 of 2) SINFRUT00000135357 Tissue factor precursor (TF) (Coagulation factor III) (Thromboplastin) (CD142 antigen). [Source:Uniprot/SWISSPROT;Acc:P13726]
15.6602 -15.11 4.71693e-07 400 5 3 8 [+] picture button
SLC25A17 (1 of 2) SINFRUT00000134670 Peroxisomal membrane protein PMP34 (34 kDa peroxisomal membrane protein) (Solute carrier family 25 member 17). [Source:Uniprot/SWISSPROT;Acc:O43808]
14.3869 -14.55 1e-06 400 10 1 4 [+] picture button
SLC25A26 SINFRUT00000130087 solute carrier family 25, member 26 [Source:RefSeq_peptide;Acc:NP_775742]
16.2451 -16.48 1.16337e-06 400 2 2 3 [+] picture button
C4orf20 SINFRUT00000147963 Ufm1-specific protease 2 (EC 3.1.2.-) (UfSP2). [Source:Uniprot/SWISSPROT;Acc:Q9NUQ7]
15.3829 -20.77 5.91812e-06 400 6 2 12 [+] picture button
STAU2 SINFRUT00000159856 Double-stranded RNA-binding protein Staufen homolog 2. [Source:Uniprot/SWISSPROT;Acc:Q9NUL3]
14.4976 -13.26 7.46363e-06 400 6 7 6 [+] picture button
Q8QFR7_FUGRU SINFRUT00000156837 Spermatogenesis associated factor (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q8QFR7]
15.3829 -17.14 1.47156e-05 400 5 1 6 [+] picture button
AK5 SINFRUT00000172689 Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP transphosphorylase). [Source:Uniprot/SWISSPROT;Acc:Q9Y6K8]
17.303 -19.64 1.78768e-05 400 5 2 6 [+] picture button
CGRRF1 SINFRUT00000145467 Cell growth regulator with RING finger domain protein 1 (Cell growth regulatory gene 19 protein) (RING finger protein 197). [Source:Uniprot/SWISSPROT;Acc:Q99675]
14.7561 -17.79 2.30777e-05 400 6 3 7 [+] picture button
SINFRUT00000179854 NOT ANNOTATED
18.8137 -19.62 3.01306e-05 400 4 2 5 [+] picture button
EGLN3 SINFRUT00000131108 Egl nine homolog 3 (EC 1.14.11.-) (Hypoxia-inducible factor prolyl hydroxylase 3) (HIF-prolyl hydroxylase 3) (HIF-PH3) (HPH-1) (Prolyl hydroxylase domain-containing protein 3) (PHD3). [Source:Uniprot/SWISSPROT;Acc:Q9H6Z9]
16.8033 -15.99 4.60044e-05 400 2 1 2 [+] picture button
PLK2 SINFRUT00000154880 Serine/threonine-protein kinase PLK2 (EC 2.7.11.21) (Polo-like kinase 1) (PLK-2) (Serine/threonine-protein kinase SNK) (Serum-inducible kinase). [Source:Uniprot/SWISSPROT;Acc:Q9NYY3]
15.1616 -16.91 5.48151e-05 400 7 2 12 [+] picture button
SLC4A5 (1 of 2) SINFRUT00000179019 sodium bicarbonate transporter 4 isoform c [Source:RefSeq_peptide;Acc:NP_597812]
17.2654 -25.18 5.61953e-05 400 6 2 8 [+] picture button
URP2_HUMAN SINFRUT00000133488 Unc-112-related protein 2 (Kindlin-3) (MIG2-like). [Source:Uniprot/SWISSPROT;Acc:Q86UX7]
16.4896 -14.81 7.71018e-05 400 4 2 9 [+] picture button
ASB5 SINFRUT00000132740 Ankyrin repeat and SOCS box protein 5 (ASB-5). [Source:Uniprot/SWISSPROT;Acc:Q8WWX0]
14.3869 -13.77 8.08664e-05 400 3 2 5 [+] picture button
LRMP SINFRUT00000178366 Lymphoid-restricted membrane protein (Protein Jaw1). [Source:Uniprot/SWISSPROT;Acc:Q12912]
14.3869 -12.05 8.08664e-05 400 7 3 9 [+] picture button
Q9Y2I9_HUMAN SINFRUT00000140694 Homolog of Homo sapiens "PREDICTED "KIAA0984 protein [Source:IPI;Acc:IPI00180403]"
14.6083 -15.58 8.33135e-05 400 5 2 5 [+] picture button
SLC29A4 SINFRUT00000162228 solute carrier family 29 (nucleoside transporters), member 4 [Source:RefSeq_peptide;Acc:NP_001035751]
15.6043 -18.48 8.52053e-05 400 6 1 9 [+] picture button
EGFL7 (2 of 2) SINFRUT00000139822 EGF-like domain-containing protein 7 precursor (Multiple EGF-like domain protein 7) (Multiple epidermal growth factor-like domain protein 7) (Vascular endothelial statin) (VE-statin) (NOTCH4-like protein) (ZNEU1). [Source:Uniprot/SWISSPROT;Acc:Q9UHF1]
19.5883 -25.94 8.90159e-05 400 7 2 11 [+] picture button
YES1 (1 of 2) SINFRUT00000142421 Proto-oncogene tyrosine-protein kinase Yes (EC 2.7.10.2) (p61-Yes) (c- Yes). [Source:Uniprot/SWISSPROT;Acc:P07947]
17.043 -20.92 8.92043e-05 400 4 3 5 [+] picture button
ATP5D SINFRUT00000163451 ATP synthase delta chain, mitochondrial precursor (EC 3.6.3.14). [Source:Uniprot/SWISSPROT;Acc:P30049]
15.1616 -15.72 0.000114957 400 4 1 4 [+] picture button
SINFRUT00000147376 NOT ANNOTATED
15.2723 -17.37 0.000115041 400 4 1 2 [+] picture button
SYTL5 SINFRUT00000166979 Synaptotagmin-like protein 5. [Source:Uniprot/SWISSPROT;Acc:Q8TDW5]
14.3869 -12.53 0.000119001 400 5 3 6 [+] picture button
SOST SINFRUT00000158036 Sclerostin precursor. [Source:Uniprot/SWISSPROT;Acc:Q9BQB4]
16.0469 -21.98 0.000123404 400 4 2 5 [+] picture button
KIAA1751 SINFRUT00000152101 KIAA1751 (KIAA1751), mRNA [Source:RefSeq_dna;Acc:NM_001080484]
14.7533 -13.58 0.00013431 400 7 1 7 [+] picture button
ASB4 SINFRUT00000144047 Ankyrin repeat and SOCS box protein 4 (ASB-4). [Source:Uniprot/SWISSPROT;Acc:Q9Y574]
14.7189 -16.27 0.000144389 400 3 1 6 [+] picture button
HSPA12B SINFRUT00000128344 Heat shock 70 kDa protein 12B. [Source:Uniprot/SWISSPROT;Acc:Q96MM6]
15.4174 -16.93 0.000153895 400 4 2 5 [+] picture button
SINFRUT00000180051 Homolog of Homo sapiens "Forkhead box E1 [Source:IPI;Acc:IPI00514058]"
14.4298 -17.68 0.000154251 400 5 2 13 [+] picture button
TEAD1 (1 of 2) SINFRUT00000172898 Transcriptional enhancer factor TEF-1 (TEA domain family member 1) (TEAD-1) (Protein GT-IIC) (Transcription factor 13) (NTEF-1). [Source:Uniprot/SWISSPROT;Acc:P28347]
16.4602 -24.8 0.000174449 400 6 5 8 [+] picture button
KCNH1 SINFRUT00000181747 Potassium voltage-gated channel subfamily H member 1 (Voltage-gated potassium channel subunit Kv10.1) (Ether-a-go-go potassium channel 1) (hEAG1) (h-eag). [Source:Uniprot/SWISSPROT;Acc:O95259]
16.8216 -20.73 0.000187322 400 5 2 7 [+] picture button
KIAA1324L (1 of 2) SINFRUT00000129946 KIAA1324-like (KIAA1324L), mRNA [Source:RefSeq_dna;Acc:NM_152748]
15.9363 -14.79 0.000188032 400 3 4 3 [+] picture button
TUBB2B SINFRUT00000128450 Tubulin beta-2B chain. [Source:Uniprot/SWISSPROT;Acc:Q9BVA1]
15.9363 -19.25 0.000198563 400 8 2 9 [+] picture button
EIF4G3 SINFRUT00000161193 Eukaryotic translation initiation factor 4 gamma 3 (eIF-4-gamma 3) (eIF-4G 3) (eIF4G 3) (eIF-4-gamma II) (eIF4GII). [Source:Uniprot/SWISSPROT;Acc:O43432]
16.1445 -14.44 0.000205041 400 4 3 7 [+] picture button
IDH3B SINFRUT00000169032 Isocitrate dehydrogenase [NAD] subunit beta, mitochondrial precursor (EC 1.1.1.41) (Isocitric dehydrogenase) (NAD(+)-specific ICDH). [Source:Uniprot/SWISSPROT;Acc:O43837]
14.9403 -17.04 0.000206971 400 6 1 5 [+] picture button
JMJD6 SINFRUT00000162568 JmjC domain-containing protein 6 (Jumonji domain-containing protein 6) (Protein PTDSR) (Phosphatidylserine receptor). [Source:Uniprot/SWISSPROT;Acc:Q6NYC1]
15.8928 -18.66 0.000207368 400 4 1 4 [+] picture button
STK38 SINFRUT00000164321 Serine/threonine-protein kinase 38 (EC 2.7.11.1) (NDR1 protein kinase) (Nuclear Dbf2-related kinase 1). [Source:Uniprot/SWISSPROT;Acc:Q15208]
14.6535 -16.88 0.000226589 400 6 1 7 [+] picture button
SINFRUT00000176992 Homolog of Gallus gallus "Myosin light chain alkali, non-muscle isoform (G2 catalytic) (LC17- NM). [Source:Uniprot/SWISSPROT;Acc:P08296]"
15.7546 -15.61 0.000228429 400 4 3 7 [+] picture button
ARHGEF7 (1 of 2) SINFRUT00000181946 Rho guanine nucleotide exchange factor 7 (PAK-interacting exchange factor beta) (Beta-Pix) (COOL-1) (p85). [Source:Uniprot/SWISSPROT;Acc:Q14155]
16.0469 -17.95 0.000275147 400 6 2 6 [+] picture button
AEBP1 (2 of 2) SINFRUT00000178928 adipocyte enhancer binding protein 1 precursor [Source:RefSeq_peptide;Acc:NP_001120]
15.1616 -15.36 0.00029019 400 3 3 3 [+] picture button
VCL (2 of 2) SINFRUT00000151629 Vinculin (Metavinculin). [Source:Uniprot/SWISSPROT;Acc:P18206]
15.4262 -13.09 0.000305701 400 2 4 2 [+] picture button
RAPGEF5 (2 of 2) SINFRUT00000161033 Rap guanine nucleotide exchange factor 5 (Guanine nucleotide exchange factor for Rap1) (Related to Epac) (Repac) (M-Ras-regulated Rap GEF) (MR-GEF). [Source:Uniprot/SWISSPROT;Acc:Q92565]
14.8296 -18.02 0.00032865 400 5 2 5 [+] picture button
CRTC1 (2 of 2) SINFRUT00000168989 CREB-regulated transcription coactivator 1 (Transducer of regulated cAMP response element-binding protein 1) (Transducer of CREB protein 1) (Mucoepidermoid carcinoma translocated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q6UUV9]
16.2076 -19.86 0.000365213 400 3 2 4 [+] picture button
C20orf118 SINFRUT00000157173 Homolog of Homo sapiens "OTTHUMP00000040313 [Source:IPI;Acc:IPI00453458]"
14.7189 -17.26 0.00036714 400 5 3 6 [+] picture button
Q4W7H2_FUGRU SINFRUT00000144311 Putative growth hormone like protein-1. [Source:Uniprot/SPTREMBL;Acc:Q4W7H2]
14.7189 -14.02 0.00036714 400 7 1 11 [+] picture button
KCNMB4 SINFRUT00000148173 Calcium-activated potassium channel subunit beta 4 (Calcium-activated potassium channel, subfamily M subunit beta 4) (Maxi K channel subunit beta 4) (BK channel subunit beta 4) (Slo-beta 4) (K(VCA)beta 4) (Charybdotoxin receptor subunit beta 4) (BKbeta4) [Source:Uniprot/SWISSPROT;Acc:Q86W47]
14.4976 -18.42 0.000377008 400 6 2 6 [+] picture button
PPP2R2D SINFRUT00000154126 Serine/threonine-protein phosphatase 2A 55 kDa regulatory subunit B delta isoform (PP2A, subunit B, B-delta isoform) (PP2A, subunit B, B55-delta isoform) (PP2A, subunit B, PR55-delta isoform) (PP2A, subunit B, R2-delta isoform). [Source:Uniprot/SWISSPROT;Acc:Q66LE6]
15.2669 -19.42 0.000391292 400 3 3 3 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.5313 -17.58 0.000395185 400 5 4 5 [+] picture button
CRYM SINFRUT00000128990 Mu-crystallin homolog (NADP-regulated thyroid-hormone-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q14894]
16.4049 -20.22 0.000412401 400 7 2 8 [+] picture button

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Download table: GFF TXT
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