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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-122

654 hits found.


Page 1 of 14
1 2 3 4 5 6 7 8 9 10 11 .. 14 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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BCAT2 SINFRUT00000137471 Branched-chain-amino-acid aminotransferase, mitochondrial precursor (EC 2.6.1.42) (BCAT(m)) (Placental protein 18) (PP18). [Source:Uniprot/SWISSPROT;Acc:O15382]
17.4696 -16.13 0.0000000156291 400 7 1 7 [+] picture button
CLCN3 SINFRUT00000172006 Chloride channel protein 3 (ClC-3). [Source:Uniprot/SWISSPROT;Acc:P51790]
17.3943 -17.02 0.0000002409 400 6 3 11 [+] picture button
PPIB SINFRUT00000138892 Peptidyl-prolyl cis-trans isomerase B precursor (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin B) (S-cyclophilin) (SCYLP) (CYP-S1). [Source:Uniprot/SWISSPROT;Acc:P23284]
16.5153 -16 0.000000511337 400 4 1 5 [+] picture button
TMEM2 (2 of 2) SINFRUT00000157571 transmembrane protein 2 [Source:RefSeq_peptide;Acc:NP_037522]
18.3857 -20.53 0.000001 400 9 1 2 [+] picture button
Q90XY2_FUGRU SINFRUT00000154154 3'-phosphoadenosine 5'-phosphosulfate synthase 2. [Source:Uniprot/SPTREMBL;Acc:Q90XY2]
16.5153 -14.94 0.00000282361 400 6 3 9 [+] picture button
GTF2B SINFRUT00000135590 Transcription initiation factor IIB (General transcription factor TFIIB) (S300-II). [Source:Uniprot/SWISSPROT;Acc:Q00403]
18.5646 -23.08 0.00000344651 400 4 8 8 [+] picture button
P25A_HUMAN SINFRUT00000145212 Tubulin polymerization-promoting protein (TPPP) (25 kDa brain-specific protein) (p25-alpha) (p24) (p25). [Source:Uniprot/SWISSPROT;Acc:O94811]
16.6784 -20.6 0.00000376164 400 7 6 11 [+] picture button
KCNF1 (1 of 2) SINFRUT00000134639 Potassium voltage-gated channel subfamily F member 1 (Voltage-gated potassium channel subunit Kv5.1) (kH1). [Source:Uniprot/SWISSPROT;Acc:Q9H3M0]
16.6671 -19.31 0.00000407732 400 3 1 3 [+] picture button
C1orf58 SINFRUT00000163657 Uncharacterized protein C1orf58. [Source:Uniprot/SPTREMBL;Acc:Q5VW32]
16.2951 -17.57 0.000010769 400 7 2 10 [+] picture button
AP3S1 SINFRUT00000127147 AP-3 complex subunit sigma-1 (Adapter-related protein complex 3 sigma- 1 subunit) (Sigma-adaptin 3a) (AP-3 complex sigma-3A subunit) (Sigma- 3A-adaptin) (Clathrin-associated/assembly/adapter protein, small 3). [Source:Uniprot/SWISSPROT;Acc:Q92572]
16.4464 -16.34 0.0000109876 400 10 9 15 [+] picture button
LAMC3 SINFRUT00000139767 Laminin subunit gamma-3 precursor (Laminin 12 gamma 3 subunit). [Source:Uniprot/SWISSPROT;Acc:Q9Y6N6]
17.9015 -17.59 0.0000119437 400 4 1 6 [+] picture button
SINFRUT00000178585 Homolog of Gallus gallus "Occludin. [Source:Uniprot/SWISSPROT;Acc:Q91049]"
17.3149 -22.83 0.0000127136 400 4 3 4 [+] picture button
LYAR_HUMAN SINFRUT00000138683 Cell growth-regulating nucleolar protein. [Source:Uniprot/SWISSPROT;Acc:Q9NX58]
16.8456 -17.78 0.0000141662 400 5 3 8 [+] picture button
C9orf86 SINFRUT00000179226 Putative GTP-binding protein Parf (Partner of ARF). [Source:Uniprot/SWISSPROT;Acc:Q3YEC7]
18.4971 -17.73 0.0000145389 400 8 4 10 [+] picture button
BCKDK SINFRUT00000156939 [3-methyl-2-oxobutanoate dehydrogenase [lipoamide]] kinase, mitochondrial precursor (EC 2.7.11.4) (Branched-chain alpha-ketoacid dehydrogenase kinase) (BCKDHKIN) (BCKD-kinase). [Source:Uniprot/SWISSPROT;Acc:O14874]
17.286 -15.45 0.000018589 400 5 2 5 [+] picture button
VPS37B SINFRUT00000148201 vacuolar protein sorting 37B [Source:RefSeq_peptide;Acc:NP_078943]
17.0658 -21.92 0.0000192342 400 4 1 5 [+] picture button
RPS6KC1 SINFRUT00000144656 Ribosomal protein S6 kinase delta-1 (EC 2.7.11.1) (52 kDa ribosomal protein S6 kinase) (Ribosomal S6 kinase-like protein with two PSK domains 118 kDa protein) (SPHK1-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q96S38]
17.0658 -16.59 0.0000194809 400 6 4 11 [+] picture button
LNPEP SINFRUT00000148362 Leucyl-cystinyl aminopeptidase (EC 3.4.11.3) (Cystinyl aminopeptidase) (Oxytocinase) (OTase) (Insulin-regulated membrane aminopeptidase) (Insulin-responsive aminopeptidase) (IRAP) (Placental leucine aminopeptidase) (P-LAP). [Source:Uniprot/SWISSPROT;Acc:Q9UIQ6]
16.8456 -21.5 0.0000216618 400 8 4 12 [+] picture button
SNRPB2 SINFRUT00000152466 U2 small nuclear ribonucleoprotein B''. [Source:Uniprot/SWISSPROT;Acc:P08579]
17.3961 -23.93 0.000024012 400 5 4 8 [+] picture button
NP_954584.1 SINFRUT00000159621 RIKEN cDNA A930016P21 gene [Source:MarkerSymbol;Acc:MGI:1915323]RIKEN cDNA A930016P21 gene [Source:MarkerSymbol;Acc:MGI:1915323] BY ORTHOLOGY TO:ENSRNOT00000046325
18.6473 -17.35 0.0000276603 400 3 1 3 [+] picture button
MTMR2 SINFRUT00000141969 Myotubularin-related protein 2 (EC 3.1.3.-). [Source:Uniprot/SWISSPROT;Acc:Q13614]
16.7966 -19 0.0000371383 400 8 3 15 [+] picture button
SH3GLB1 SINFRUT00000132765 SH3 domain GRB2-like protein B1 (EC 2.3.1.-) (Endophilin-B1) (Bax- interacting factor 1) (Bif-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y371]
18.88 -19.69 0.0000451124 400 3 2 3 [+] picture button
KLHL5 SINFRUT00000157952 Kelch-like protein 5. [Source:Uniprot/SWISSPROT;Acc:Q96PQ7]
17.2607 -19.51 0.0000468744 400 8 2 12 [+] picture button
SLC25A2 SINFRUT00000134315 Mitochondrial ornithine transporter 2 (Solute carrier family 25 member 2). [Source:Uniprot/SWISSPROT;Acc:Q9BXI2]
19.488 -20.81 0.0000513352 400 5 2 7 [+] picture button
PGRMC1 SINFRUT00000143799 Membrane-associated progesterone receptor component 1 (mPR). [Source:Uniprot/SWISSPROT;Acc:O00264]
16.5521 -15.55 0.0000672587 400 6 4 13 [+] picture button
CHST12 (1 of 2) SINFRUT00000163558 Carbohydrate sulfotransferase 12 (EC 2.8.2.5) (Chondroitin 4-O- sulfotransferase 2) (Chondroitin 4-sulfotransferase 2) (C4ST2) (C4ST- 2) (Sulfotransferase Hlo). [Source:Uniprot/SWISSPROT;Acc:Q9NRB3]
17.219 -18.18 0.0000674854 400 6 3 8 [+] picture button
BMP4 SINFRUT00000149467 Bone morphogenetic protein 4 precursor (BMP-4) (BMP-2B). [Source:Uniprot/SWISSPROT;Acc:P12644]
16.7779 -17.21 0.0000834328 400 4 2 5 [+] picture button
SINFRUT00000136502 Homolog of Brachydanio rerio "Vesicle-associated membrane protein 8 (Endobrevin). [Source:Uniprot/SPTREMBL;Acc:Q7ZUC1]"
16.9557 -17.88 0.0000859763 400 5 1 4 [+] picture button
NP_001005472.1 SINFRUT00000144334 similar to Laminin receptor 1 (LOC388524), mRNA [Source:RefSeq_dna;Acc:NM_001005472]
16.2951 -18.61 0.0000908249 400 8 2 12 [+] picture button
SINFRUT00000181452 Homolog of Homo sapiens "PREDICTED "KIAA1383 protein [Source:IPI;Acc:IPI00002180]"
17.1759 -18.88 0.0000909586 400 6 2 7 [+] picture button
ABHD11 SINFRUT00000148531 Abhydrolase domain-containing protein 11 (EC 3.-.-.-) (Williams-Beuren syndrome chromosome region 21 protein). [Source:Uniprot/SWISSPROT;Acc:Q8NFV4]
16.3734 -17.5 0.000100197 400 9 3 12 [+] picture button
INTS6 SINFRUT00000142623 Integrator complex subunit 6 (Int6) (Protein deleted in cancer 1) (Protein DDX26) (DBI-1) (Deleted in cancer 1) (DICE1). [Source:Uniprot/SWISSPROT;Acc:Q9UL03]
17.1759 -19.88 0.000101798 400 6 2 7 [+] picture button
IQGAP1 SINFRUT00000166011 Ras GTPase-activating-like protein IQGAP1 (p195). [Source:Uniprot/SWISSPROT;Acc:P46940]
16.9557 -18.73 0.000106539 400 6 2 6 [+] picture button
NP_065930.2 (1 of 2) SINFRUT00000183579 CDNA FLJ31980 fis, clone NT2RP7008487, weakly similar to TRICHOHYALIN. [Source:Uniprot/SPTREMBL;Acc:Q96MS1]
18.4971 -26.83 0.000107792 400 5 2 6 [+] picture button
ABL1 SINFRUT00000178608 Proto-oncogene tyrosine-protein kinase ABL1 (EC 2.7.10.2) (p150) (c- ABL) (Abelson murine leukemia viral oncogene homolog 1). [Source:Uniprot/SWISSPROT;Acc:P00519]
17.7709 -14.6 0.000119905 400 4 2 5 [+] picture button
SINFRUT00000139660 Homolog of Brachydanio rerio "Kinectin 1. [Source:Uniprot/SPTREMBL;Acc:Q6TEN8]"
17.286 -16.81 0.000122219 400 3 2 3 [+] picture button
Q800A9_FUGRU SINFRUT00000134400 Fra1 protein. [Source:Uniprot/SPTREMBL;Acc:Q800A9]
18.1668 -18.09 0.000125852 400 4 3 6 [+] picture button
RALA SINFRUT00000140106 Ras-related protein Ral-A precursor. [Source:Uniprot/SWISSPROT;Acc:P11233]
17.1759 -16.9 0.000133008 400 6 3 6 [+] picture button
TOR3A SINFRUT00000143036 Torsin-3A precursor (Torsin family 3 member A) (ATP-dependent interferon-responsive protein). [Source:Uniprot/SWISSPROT;Acc:Q9H497]
16.9935 -15.74 0.000147935 400 5 1 5 [+] picture button
NP_114110.1 SINFRUT00000138817 CDNA FLJ90369 fis, clone NT2RP2004447. [Source:Uniprot/SPTREMBL;Acc:Q8NCB5]
17.7264 -18.7 0.000151981 400 6 3 6 [+] picture button
SH3TC2 SINFRUT00000157524 SH3 domain and tetratricopeptide repeats-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q8TF17]
16.9557 -17.38 0.000153551 400 4 2 5 [+] picture button
ARRB2 (1 of 2) SINFRUT00000171487 Beta-arrestin-2 (Arrestin beta 2). [Source:Uniprot/SWISSPROT;Acc:P32121]
18.3101 -18.88 0.000162309 400 8 3 11 [+] picture button
SMYD4 SINFRUT00000148079 SET and MYND domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8IYR2]
16.6254 -14.66 0.000168937 400 7 2 7 [+] picture button
DDX5 (1 of 2) SINFRUT00000152873 Probable ATP-dependent RNA helicase DDX5 (EC 3.6.1.-) (DEAD box protein 5) (RNA helicase p68). [Source:Uniprot/SWISSPROT;Acc:P17844]
17.6333 -19.47 0.000169859 400 6 3 9 [+] picture button
GLI3 SINFRUT00000163565 Zinc finger protein GLI3. [Source:Uniprot/SWISSPROT;Acc:P10071]
16.8788 -25.63 0.000173821 400 5 11 6 [+] picture button
C12orf49 SINFRUT00000136311 CDNA: FLJ21415 fis, clone COL04030 (Chromosome 12 open reading frame 49). [Source:Uniprot/SPTREMBL;Acc:Q9H741]
16.3924 -16.65 0.000183008 400 3 3 4 [+] picture button
Q7M555_FUGRU SINFRUT00000138679 Otopetrin 1. [Source:Uniprot/SPTREMBL;Acc:Q7M555]
17.7264 -23.15 0.000185012 400 4 2 5 [+] picture button
SINFRUT00000165787 Homolog of Homo sapiens "Uveal aUtoantigen with coiled-coil domains and ankyrin repeats isoform 2 [Source:IPI;Acc:IPI00513788]"
19.3779 -25.06 0.000187965 400 5 2 6 [+] picture button
RRAGB SINFRUT00000150511 Ras-related GTP-binding protein B (Rag B) (RagB). [Source:Uniprot/SWISSPROT;Acc:Q5VZM2]
17.2219 -18.3 0.000197265 400 10 3 21 [+] picture button
GALNT13 SINFRUT00000142594 Polypeptide N-acetylgalactosaminyltransferase 13 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 13) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 13) (Polypeptide GalNAc transferase 13) (GalNAc-T13) (pp-GaNTase 13). [Source:Uniprot/SWISSPROT;Acc:Q8IUC8]
16.8456 -24.39 0.000205276 400 4 2 7 [+] picture button

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Download table: GFF TXT
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