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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-107

733 hits found.


Page 1 of 15
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CDK6 SINFRUT00000179066 Cell division protein kinase 6 (EC 2.7.11.22) (Serine/threonine- protein kinase PLSTIRE). [Source:Uniprot/SWISSPROT;Acc:Q00534]
16.4051 -25.19 1.22182e-07 400 7 1 9 [+] picture button
PELI2 (2 of 2) SINFRUT00000144598 Protein pellino homolog 2 (Pellino-2). [Source:Uniprot/SWISSPROT;Acc:Q9HAT8]
17.0922 -15.45 3.32476e-07 400 6 2 11 [+] picture button
C3orf57 SINFRUT00000152514 Protein ADMP. [Source:Uniprot/SWISSPROT;Acc:Q8NFR3]
18.7357 -21.48 1.1341e-06 400 5 2 10 [+] picture button
GKAP1 SINFRUT00000174053 G kinase anchoring protein 1 [Source:RefSeq_peptide;Acc:NP_079487]
16.6909 -19.82 1.1452e-06 400 5 3 5 [+] picture button
WIPI2 SINFRUT00000163581 WD repeat domain phosphoinositide-interacting protein 2 (WIPI-2) (WIPI49-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q9Y4P8]
16.3554 -18.38 1.16063e-06 400 5 9 10 [+] picture button
SVEP1 SINFRUT00000128123 polydom [Source:RefSeq_peptide;Acc:NP_699197]
17.3114 -16.84 1.17591e-06 400 8 6 12 [+] picture button
RSPO3 (1 of 2) SINFRUT00000136059 R-spondin-3 precursor (Roof plate-specific spondin-3) (hRspo3) (Thrombospondin type-1 domain-containing protein 2) (Protein with TSP type-1 repeat) (hPWTSR). [Source:Uniprot/SWISSPROT;Acc:Q9BXY4]
16.9827 -20.6 3.64528e-06 400 8 2 14 [+] picture button
SECISBP2 SINFRUT00000156483 SECIS-binding protein 2 (Selenocysteine insertion sequence-binding protein 2). [Source:Uniprot/SWISSPROT;Acc:Q96T21]
17.3693 -17.1 7.06823e-06 400 5 1 8 [+] picture button
BHLHB2 (1 of 2) SINFRUT00000151465 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
19.0478 -26.96 7.48546e-06 400 6 4 9 [+] picture button
PXMP2 SINFRUT00000155101 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
18.0187 -20.31 1.07898e-05 400 6 2 10 [+] picture button
TULP4 (1 of 2) SINFRUT00000168784 Tubby-related protein 4 (Tubby-like protein 4) (Tubby superfamily protein). [Source:Uniprot/SWISSPROT;Acc:Q9NRJ4]
17.3114 -15.01 1.53884e-05 400 11 3 13 [+] picture button
C1orf142 SINFRUT00000144301 C1orf142 protein (Chromosome 1 open reading frame 142). [Source:Uniprot/SPTREMBL;Acc:Q8N558]
16.8731 -19.32 1.68046e-05 400 4 4 9 [+] picture button
TAGLN3 SINFRUT00000158375 Transgelin-3 (Neuronal protein NP25) (Neuronal protein 22) (NP22). [Source:Uniprot/SWISSPROT;Acc:Q9UI15]
17.2399 -20.8 1.78185e-05 400 4 6 6 [+] picture button
NP_001027829.1 SINFRUT00000142690 swan [Source:RefSeq_peptide;Acc:NP_001027829]
16.3253 -13.9 1.80042e-05 400 6 3 9 [+] picture button
ECD SINFRUT00000165655 SGT1 protein (hSGT1) (Ecdysoneless homolog) (Suppressor of GCR2). [Source:Uniprot/SWISSPROT;Acc:O95905]
16.8054 -16.59 1.86267e-05 400 6 1 10 [+] picture button
RFX4 SINFRUT00000164760 regulatory factor X4 isoform c [Source:RefSeq_peptide;Acc:NP_998759]
18.2974 -21.77 1.98609e-05 400 7 4 16 [+] picture button
CETN2 SINFRUT00000138190 Centrin-2 (Caltractin isoform 1). [Source:Uniprot/SWISSPROT;Acc:P41208]
16.9827 -17.1 1.98905e-05 400 9 2 13 [+] picture button
SINFRUT00000179051 NOT ANNOTATED
17.0922 -25.31 2.34088e-05 400 10 1 6 [+] picture button
Q8N221_HUMAN SINFRUT00000146167 CDNA FLJ36290 fis, clone THYMU2003932. [Source:Uniprot/SPTREMBL;Acc:Q8N221]
17.0922 -18.2 2.74947e-05 400 5 1 9 [+] picture button
KCNK9 SINFRUT00000149574 Potassium channel subfamily K member 9 (Acid-sensitive potassium channel protein TASK-3) (TWIK-related acid-sensitive K(+) channel 3) (Two pore potassium channel KT3.2). [Source:Uniprot/SWISSPROT;Acc:Q9NPC2]
17.64 -16.67 2.96928e-05 400 5 4 10 [+] picture button
PBX4 SINFRUT00000150643 Pre-B-cell leukemia transcription factor 4 (Homeobox protein PBX4). [Source:Uniprot/SWISSPROT;Acc:Q9BYU1]
16.4348 -17.55 3.12814e-05 400 7 2 9 [+] picture button
DSCR1 SINFRUT00000154160 Calcipressin-1 (Down syndrome critical region protein 1) (Myocyte- enriched calcineurin-interacting protein 1) (MCIP1) (Adapt78). [Source:Uniprot/SWISSPROT;Acc:P53805]
16.8731 -14.45 3.16531e-05 400 7 3 9 [+] picture button
SINFRUT00000132712 cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141]cDNA sequence BC003266 [Source:MarkerSymbol;Acc:MGI:1933141] BY ORTHOLOGY TO:ENSMUST00000046609
16.5519 -17.85 3.90513e-05 400 5 1 10 [+] picture button
VPS45 SINFRUT00000139002 Vacuolar protein sorting-associated protein 45 (h-VPS45) (hlVps45). [Source:Uniprot/SWISSPROT;Acc:Q9NRW7]
16.8731 -17.9 4.3163e-05 400 9 1 11 [+] picture button
S100Z SINFRUT00000136497 Protein S100-Z (S100 calcium-binding protein Z). [Source:Uniprot/SWISSPROT;Acc:Q8WXG8]
17.2018 -15 4.63663e-05 400 5 2 7 [+] picture button
SINFRUT00000179877 Homolog of Homo sapiens "PREDICTED "similar to zinc finger protein 533 [Source:IPI;Acc:IPI00397957]"
17.6206 -20.66 5.42328e-05 400 6 3 10 [+] picture button
NOB1 SINFRUT00000153525 RNA-binding protein NOB1 (Protein ART-4) (Phosphorylation regulatory protein HP-10). [Source:Uniprot/SWISSPROT;Acc:Q9ULX3]
17.8592 -23.02 5.62234e-05 400 3 1 6 [+] picture button
PNN SINFRUT00000139553 Pinin (140 kDa nuclear and cell adhesion-related phosphoprotein) (Domain-rich serine protein) (DRS-protein) (DRSP) (Melanoma metastasis clone A protein) (Desmosome-associated protein) (SR-like protein) (Nuclear protein SDK3). [Source:Uniprot/SWISSPROT;Acc:Q9H307]
16.4348 -16.97 5.72549e-05 400 3 4 4 [+] picture button
O73806_FUGRU SINFRUT00000158653 PAS1. [Source:Uniprot/SPTREMBL;Acc:O73806]
16.9827 -20.14 5.87396e-05 400 4 4 8 [+] picture button
SYT14 (2 of 2) SINFRUT00000164458 Synaptotagmin-14 (Synaptotagmin XIV) (SytXIV). [Source:Uniprot/SWISSPROT;Acc:Q8NB59]
17.6042 -16.44 6.02198e-05 400 9 4 14 [+] picture button
C6orf145 SINFRUT00000163525 Uncharacterized protein C6orf145. [Source:Uniprot/SPTREMBL;Acc:Q5TGL8]
17.2018 -20.81 6.94857e-05 400 3 3 4 [+] picture button
LRRC61 SINFRUT00000129252 Leucine-rich repeat-containing protein 61. [Source:Uniprot/SWISSPROT;Acc:Q9BV99]
16.9827 -17.41 7.07653e-05 400 6 4 11 [+] picture button
PENK SINFRUT00000178208 Proenkephalin A precursor [Contains: Synenkephalin; Met-enkephalin (Opioid growth factor) (OGF); Met-enkephalin-Arg-Gly-Leu; Leu- enkephalin; Met-enkephalin-Arg-Phe]. [Source:Uniprot/SWISSPROT;Acc:P01210]
17.4209 -17.38 7.35599e-05 400 7 2 15 [+] picture button
EPB41L3 (1 of 2) SINFRUT00000183349 Band 4.1-like protein 3 (4.1B) (Differentially expressed in adenocarcinoma of the lung protein 1) (DAL-1). [Source:Uniprot/SWISSPROT;Acc:Q9Y2J2]
17.1341 -16.91 7.68389e-05 400 6 2 8 [+] picture button
KCNK4 (1 of 2) SINFRUT00000138855 Potassium channel subfamily K member 4 (TWIK-related arachidonic acid- stimulated potassium channel protein) (TRAAK) (Two pore K(+) channel KT4.1). [Source:Uniprot/SWISSPROT;Acc:Q9NYG8]
16.654 -18.78 8.09789e-05 400 7 1 7 [+] picture button
LEPR SINFRUT00000160667 Leptin receptor precursor (LEP-R) (OB receptor) (OB-R) (HuB219) (CD295 antigen). [Source:Uniprot/SWISSPROT;Acc:P48357]
17.4852 -19.77 8.10676e-05 400 5 3 10 [+] picture button
BHLHB2 (2 of 2) SINFRUT00000141506 Class B basic helix-loop-helix protein 2 (bHLHB2) (Differentially expressed in chondrocytes protein 1) (DEC1) (Enhancer-of-split and hairy-related protein 2) (SHARP-2) (Stimulated by retinoic acid gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:O14503]
17.64 -23.99 8.14781e-05 400 7 4 11 [+] picture button
NP_001008739.1 SINFRUT00000182646 similar to RIKEN cDNA 2310039H08 (LOC441150), mRNA [Source:RefSeq_dna;Acc:NM_001008739]
16.4348 -18.29 8.52505e-05 400 6 2 9 [+] picture button
REEP5 SINFRUT00000149017 Receptor expression-enhancing protein 5 (Polyposis locus protein 1) (TB2 protein). [Source:Uniprot/SWISSPROT;Acc:Q00765]
16.5444 -17.68 9.27419e-05 400 5 1 8 [+] picture button
NUP54 SINFRUT00000143816 Nucleoporin p54 (54 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q7Z3B4]
18.407 -19.59 9.94546e-05 400 3 2 5 [+] picture button
RFWD3 SINFRUT00000146981 RING finger and WD repeat domain-containing protein 3 (RING finger protein 201). [Source:Uniprot/SWISSPROT;Acc:Q6PCD5]
17.2018 -14.09 0.000105389 400 5 3 11 [+] picture button
PAPPA SINFRUT00000147178 Pappalysin-1 precursor (EC 3.4.24.79) (Pregnancy-associated plasma protein-A) (PAPP-A) (Insulin-like growth factor-dependent IGF-binding protein 4 protease) (IGF-dependent IGFBP-4 protease) (IGFBP-4ase). [Source:Uniprot/SWISSPROT;Acc:Q13219]
17.8813 -21.93 0.000108598 400 3 2 5 [+] picture button
NUDT15 SINFRUT00000162214 Probable 7,8-dihydro-8-oxoguanine triphosphatase NUDT15 (EC 3.1.6.-) (8-oxo-dGTPase NUDT15) (Nucleoside diphosphate-linked moiety X motif 15) (Nudix motif 15). [Source:Uniprot/SWISSPROT;Acc:Q9NV35]
17.4209 -21.03 0.000109766 400 9 2 12 [+] picture button
TAF5L SINFRUT00000171977 TAF5-like RNA polymerase II p300/CBP-associated factor-associated factor 65 kDa subunit 5L (PCAF-associated factor 65 beta) (PAF65- beta). [Source:Uniprot/SWISSPROT;Acc:O75529]
16.7529 -12.59 0.000127625 400 6 2 10 [+] picture button
SLC35A4 SINFRUT00000155149 solute carrier family 35, member A4 [Source:RefSeq_peptide;Acc:NP_542401]
16.7825 -18.92 0.000129856 400 8 2 14 [+] picture button
C16orf33 SINFRUT00000147703 U11/U12 snRNP 25 kDa protein (Minus-99 protein). [Source:Uniprot/SWISSPROT;Acc:Q9BV90]
17.0922 -16.85 0.000135052 400 5 3 11 [+] picture button
TDRD6 SINFRUT00000174339 Tudor domain-containing protein 6 (Antigen NY-CO-45). [Source:Uniprot/SWISSPROT;Acc:O60522]
17.4209 -24.12 0.000147339 400 3 2 5 [+] picture button
Q7M564_FUGRU SINFRUT00000141673 Ruby-eye2-like protein. [Source:Uniprot/SPTREMBL;Acc:Q7M564]
16.7635 -24.68 0.000150584 400 8 3 14 [+] picture button
MLYCD SINFRUT00000161645 Malonyl-CoA decarboxylase, mitochondrial precursor (EC 4.1.1.9) (MCD). [Source:Uniprot/SWISSPROT;Acc:O95822]
16.5857 -16.48 0.000154958 400 2 2 4 [+] picture button
C18orf10 SINFRUT00000177037 Tubulin polyglutamylase complex subunit 2 (PGs2). [Source:Uniprot/SWISSPROT;Acc:Q68CL5]
16.3253 -15.94 0.000174401 400 6 3 10 [+] picture button

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Download table: GFF TXT
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