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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-miR-100

703 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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Q9YGN1_FUGRU SINFRUT00000164841 Sand protein. [Source:Uniprot/SPTREMBL;Acc:Q9YGN1]
15.9648 -19.08 0.000000891023 400 3 3 5 [+] picture button
ULK3 SINFRUT00000182312 Serine/threonine-protein kinase ULK3 (EC 2.7.11.1) (Unc-51-like kinase 3). [Source:Uniprot/SWISSPROT;Acc:Q6PHR2]
15.4636 -13.64 0.000001 400 8 1 6 [+] picture button
PMM1 (3 of 3) SINFRUT00000177280 Phosphomannomutase 1 (EC 5.4.2.8) (PMM 1) (PMMH-22). [Source:Uniprot/SWISSPROT;Acc:Q92871]
14.7536 -13.16 0.00000204036 400 6 4 14 [+] picture button
SSR3 SINFRUT00000133537 Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma). [Source:Uniprot/SWISSPROT;Acc:Q9UNL2]
15.4142 -16.28 0.00000267429 400 5 2 8 [+] picture button
TMEM166 SINFRUT00000176381 Transmembrane protein 166. [Source:Uniprot/SWISSPROT;Acc:Q9H8M9]
18.0567 -25.34 0.0000031747 400 5 3 8 [+] picture button
C1orf96 SINFRUT00000158949 Uncharacterized protein C1orf96. [Source:Uniprot/SWISSPROT;Acc:Q6IQ19]
15.1304 -12.25 0.0000105411 400 7 4 9 [+] picture button
PLK1 SINFRUT00000152603 Serine/threonine-protein kinase PLK1 (EC 2.7.11.21) (Polo-like kinase 1) (PLK-1) (Serine/threonine-protein kinase 13) (STPK13). [Source:Uniprot/SWISSPROT;Acc:P53350]
14.7536 -15.26 0.0000113991 400 8 2 14 [+] picture button
ACPT SINFRUT00000158993 Testicular acid phosphatase precursor (EC 3.1.3.2). [Source:Uniprot/SWISSPROT;Acc:Q9BZG2]
15.2365 -15.41 0.00001285 400 7 2 9 [+] picture button
MAN2A2 SINFRUT00000165960 mannosidase, alpha, class 2A, member 2 [Source:RefSeq_peptide;Acc:NP_006113]
14.3903 -17.18 0.0000156573 400 9 3 13 [+] picture button
IPPK SINFRUT00000131558 Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (IPK1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9H8X2]
16.2951 -22.23 0.0000199714 400 7 1 15 [+] picture button
RAB23 SINFRUT00000154777 Ras-related protein Rab-23. [Source:Uniprot/SWISSPROT;Acc:Q9ULC3]
15.0839 -18.96 0.000027914 400 6 2 8 [+] picture button
CBARA1 SINFRUT00000176572 calcium binding atopy-related autoantigen 1 [Source:RefSeq_peptide;Acc:NP_006068]
14.7536 -13.76 0.0000285041 400 6 2 12 [+] picture button
Q6WNS8_FUGRU SINFRUT00000130972 Transcription factor Sox9b. [Source:Uniprot/SPTREMBL;Acc:Q6WNS8]
16.1824 -19.29 0.0000285924 400 9 7 11 [+] picture button
DDB1 SINFRUT00000129129 DNA damage-binding protein 1 (Damage-specific DNA-binding protein 1) (UV-damaged DNA-binding factor) (DDB p127 subunit) (DDBa) (UV-damaged DNA-binding protein 1) (UV-DDB 1) (Xeroderma pigmentosum group E- complementing protein) (XPCe) (XPE-binding factor) [Source:Uniprot/SWISSPROT;Acc:Q16531]
16.0759 -19.92 0.0000302976 400 5 2 9 [+] picture button
TMEM170 SINFRUT00000142655 transmembrane protein 170 (TMEM170), mRNA [Source:RefSeq_dna;Acc:NM_145254]
18.387 -22.7 0.0000412848 400 8 2 11 [+] picture button
SLA2 SINFRUT00000164808 Src-like-adapter 2 (Src-like adapter protein 2) (SLAP-2) (Modulator of antigen receptor signaling) (MARS). [Source:Uniprot/SWISSPROT;Acc:Q9H6Q3]
14.7012 -9.8 0.0000465972 400 8 1 10 [+] picture button
PSMA3 SINFRUT00000174895 Proteasome subunit alpha type 3 (EC 3.4.25.1) (Proteasome component C8) (Macropain subunit C8) (Multicatalytic endopeptidase complex subunit C8). [Source:Uniprot/SWISSPROT;Acc:P25788]
16.336 -22.65 0.0000471103 400 3 1 4 [+] picture button
ANKRD34 SINFRUT00000181155 ankyrin repeat domain 34 [Source:RefSeq_peptide;Acc:NP_001034977]
15.7446 -17.86 0.0000566702 400 4 1 4 [+] picture button
USP39 SINFRUT00000150748 U4/U6.U5 tri-snRNP-associated protein 2 (U4/U6.U5 tri-snRNP-associated 65 kDa protein) (65K) (Inactive ubiquitin-specific peptidase 39) (SAD1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q53GS9]
15.7446 -13.33 0.0000628899 400 5 2 6 [+] picture button
CIDEB SINFRUT00000136374 Cell death activator CIDE-B (Cell death-inducing DFFA-like effector B). [Source:Uniprot/SWISSPROT;Acc:Q9UHD4]
16.9418 -15.59 0.0000644942 400 5 1 8 [+] picture button
H2AFY SINFRUT00000160277 Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y) (Medulloblastoma antigen MU-MB-50.205). [Source:Uniprot/SWISSPROT;Acc:O75367]
16.5153 -15.93 0.0000746509 400 5 3 8 [+] picture button
RAX SINFRUT00000160463 Retinal homeobox protein Rx (Retina and anterior neural fold homeobox protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y2V3]
14.3903 -15.38 0.0000868778 400 4 1 6 [+] picture button
GALNT11 SINFRUT00000165157 Polypeptide N-acetylgalactosaminyltransferase 11 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 11) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 11) (Polypeptide GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11). [Source:Uniprot/SWISSPROT;Acc:Q8NCW6]
16.6254 -17.34 0.0000885876 400 3 1 5 [+] picture button
ACSL5 SINFRUT00000165455 Long-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5). [Source:Uniprot/SWISSPROT;Acc:Q9ULC5]
14.4233 -13.38 0.000101763 400 4 1 9 [+] picture button
CTNNB1 SINFRUT00000136043 Catenin beta-1 (Beta-catenin). [Source:Uniprot/SWISSPROT;Acc:P35222]
15.4973 -18.02 0.00011332 400 3 3 4 [+] picture button
SINFRUT00000170856 Homolog of Gallus gallus "Alpha 1 type IIA collagen precursor. [Source:Uniprot/SPTREMBL;Acc:Q90W37]"
14.8637 -12.78 0.000141282 400 5 1 3 [+] picture button
ABCD4 SINFRUT00000174954 ATP-binding cassette sub-family D member 4 (Peroxisomal membrane protein 69) (PMP69) (Peroxisomal membrane protein 1-like) (PXMP1-L) (P70R). [Source:Uniprot/SWISSPROT;Acc:O14678]
15.152 -22.45 0.000145331 400 2 1 3 [+] picture button
CDX4 SINFRUT00000139303 Homeobox protein CDX-4 (Caudal-type homeobox protein 4). [Source:Uniprot/SWISSPROT;Acc:O14627]
18.7084 -20.08 0.00015533 400 4 3 6 [+] picture button
C10orf132 (2 of 2) SINFRUT00000128903 Uncharacterized protein C10orf132. [Source:Uniprot/SWISSPROT;Acc:Q2TAP0]
15.2983 -12.28 0.000161956 400 7 1 9 [+] picture button
DCUN1D4 SINFRUT00000130578 DCN1-like protein 4 (Defective in cullin neddylation protein 1-like protein 4) (DCUN1 domain-containing protein 4). [Source:Uniprot/SWISSPROT;Acc:Q92564]
14.8637 -20.58 0.000167643 400 9 4 11 [+] picture button
KIF14 SINFRUT00000166565 Kinesin-like protein KIF14. [Source:Uniprot/SWISSPROT;Acc:Q15058]
15.0839 -9.04 0.000170859 400 8 3 10 [+] picture button
NP_001027857.1 SINFRUT00000150463 guanylate cyclase activator protein 2 [Source:RefSeq_peptide;Acc:NP_001027857]
15.3041 -14.26 0.000181107 400 5 2 9 [+] picture button
CCDC51 SINFRUT00000152942 coiled-coil domain containing 51 [Source:RefSeq_peptide;Acc:NP_078937]
15.194 -20.23 0.000213844 400 3 1 4 [+] picture button
CDT1 SINFRUT00000130732 DNA replication factor Cdt1 (Double parked homolog) (DUP). [Source:Uniprot/SWISSPROT;Acc:Q9H211]
15.3041 -19.46 0.000233599 400 5 2 6 [+] picture button
LRTM1 SINFRUT00000171739 Leucine-rich repeat and transmembrane domain-containing protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9HBL6]
17.3149 -14.27 0.000256015 400 6 4 9 [+] picture button
GM2A SINFRUT00000128275 Ganglioside GM2 activator precursor (GM2-AP) (Cerebroside sulfate activator protein) (Shingolipid activator protein 3) (SAP-3) [Contains: Ganglioside GM2 activator isoform short]. [Source:Uniprot/SWISSPROT;Acc:P17900]
15.7107 -18.41 0.000270869 400 4 2 6 [+] picture button
WNT3A SINFRUT00000168750 Protein Wnt-3a precursor. [Source:Uniprot/SWISSPROT;Acc:P56704]
15.1958 -15.53 0.000274986 400 6 3 10 [+] picture button
Q8JHW7_FUGRU SINFRUT00000140680 HSPC019. [Source:Uniprot/SPTREMBL;Acc:Q8JHW7]
15.581 -12.22 0.00027889 400 2 2 7 [+] picture button
NP_689894.1 SINFRUT00000160346 CDNA FLJ38482 fis, clone FEBRA2022963. [Source:Uniprot/SPTREMBL;Acc:Q8N928]
15.2279 -17.03 0.000298748 400 6 5 12 [+] picture button
GCLC SINFRUT00000176493 Glutamate--cysteine ligase catalytic subunit (EC 6.3.2.2) (Gamma- glutamylcysteine synthetase) (Gamma-ECS) (GCS heavy chain). [Source:Uniprot/SWISSPROT;Acc:P48506]
17.9179 -34.01 0.000301678 400 5 2 8 [+] picture button
TM9SF2 SINFRUT00000144471 Transmembrane 9 superfamily protein member 2 precursor (p76). [Source:Uniprot/SWISSPROT;Acc:Q99805]
16.2256 -15.58 0.000310658 400 7 2 9 [+] picture button
RNF121 SINFRUT00000141957 RING finger protein 121. [Source:Uniprot/SWISSPROT;Acc:Q9H920]
14.8075 -16.87 0.000311728 400 3 1 4 [+] picture button
EM55_FUGRU SINFRUT00000138881 55 kDa erythrocyte membrane protein (p55) (Membrane protein, palmitoylated 1). [Source:Uniprot/SWISSPROT;Acc:P49697]
16.0749 -16.63 0.000332811 400 9 4 12 [+] picture button
SC5DL SINFRUT00000150345 Lathosterol oxidase (EC 1.14.21.6) (Lathosterol 5-desaturase) (Delta(7)-sterol 5-desaturase) (C-5 sterol desaturase) (Sterol-C5- desaturase). [Source:Uniprot/SWISSPROT;Acc:O75845]
14.7536 -18.05 0.000355622 400 2 1 2 [+] picture button
Q8UW50_FUGRU SINFRUT00000130482 G-2 and S-phase expressed 1. [Source:Uniprot/SPTREMBL;Acc:Q8UW50]
14.7536 -24.62 0.000355622 400 5 2 6 [+] picture button
DPH2 SINFRUT00000154563 diphthamide biosynthesis protein 2 isoform a [Source:RefSeq_peptide;Acc:NP_001375]
15.0839 -17.51 0.000393288 400 5 1 7 [+] picture button
Q90WM7_FUGRU SINFRUT00000136917 Myosin heavy chain like protein. [Source:Uniprot/SPTREMBL;Acc:Q90WM7]
15.0839 -14.46 0.000408233 400 3 2 5 [+] picture button
SERGEF SINFRUT00000151655 Secretion-regulating guanine nucleotide exchange factor (Guanine nucleotide exchange factor-related protein) (Deafness locus-associated putative guanine nucleotide exchange factor) (DelGEF). [Source:Uniprot/SWISSPROT;Acc:Q9UGK8]
15.8547 -16.66 0.00041411 400 5 2 9 [+] picture button
ID4 SINFRUT00000128017 DNA-binding protein inhibitor ID-4 (Inhibitor of DNA binding 4). [Source:Uniprot/SWISSPROT;Acc:P47928]
16.0554 -15.28 0.000417253 400 6 1 9 [+] picture button
NP_659482.3 SINFRUT00000151146 MGC20983 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q96CG5]
15.0839 -16.74 0.00043568 400 5 1 6 [+] picture button

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Download table: GFF TXT
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