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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7j

844 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.7264 -19.63 9.20453e-14 400 6 3 10 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.2256 -13.46 1.67919e-13 400 5 4 5 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.5153 -15.36 1.11674e-10 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
17.286 -14.57 5.55098e-10 400 4 3 5 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
17.3961 -13.24 2.94605e-08 400 2 4 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
18.6554 -18.93 6.19932e-08 400 4 12 5 [+] picture button
MYC SINFRUT00000142540 Myc proto-oncogene protein (c-Myc) (Transcription factor p64). [Source:Uniprot/SWISSPROT;Acc:P01106]
16.9611 -19.29 7.34567e-08 400 6 13 10 [+] picture button
ACSS2 SINFRUT00000174745 Acetyl-coenzyme A synthetase, cytoplasmic (EC 6.2.1.1) (Acetate--CoA ligase) (Acyl-activating enzyme) (Acetyl-CoA synthetase) (ACS) (AceCS) (Acyl-CoA synthetase short-chain family member 2). [Source:Uniprot/SWISSPROT;Acc:Q9NR19]
16.4052 -18.19 9.28216e-08 400 3 1 3 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.8184 -16.95 9.98851e-08 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
17.5062 -17.94 1.69327e-07 400 8 7 11 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.9059 -15.96 2.95206e-07 400 5 10 10 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
16.6007 -15.97 3.52332e-07 400 5 2 7 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
16.2585 -13.31 4.19296e-07 400 3 4 5 [+] picture button
SV2C (2 of 2) SINFRUT00000151256 Synaptic vesicle glycoprotein 2C. [Source:Uniprot/SWISSPROT;Acc:Q496J9]
16.2951 -10.08 4.52252e-07 400 9 1 8 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
16.8602 -16.03 5.19952e-07 400 9 4 16 [+] picture button
O73801_FUGRU SINFRUT00000158589 Serine/threonine kinase receptor type1. [Source:Uniprot/SPTREMBL;Acc:O73801]
18.6912 -21.69 8.22493e-07 400 2 7 3 [+] picture button
SNX17 SINFRUT00000139753 Sorting nexin-17. [Source:Uniprot/SWISSPROT;Acc:Q15036]
16.0749 -16.43 8.57802e-07 400 5 4 6 [+] picture button
NEU3 SINFRUT00000159385 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
17.6163 -16.59 1.48093e-06 400 7 3 9 [+] picture button
MGAT4A SINFRUT00000163820 mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isoenzyme A [Source:RefSeq_peptide;Acc:NP_036346]
16.9216 -15.31 1.54834e-06 400 6 1 7 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.286 -15.99 2.30348e-06 400 6 1 11 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
17.4746 -17.61 2.34134e-06 400 6 4 9 [+] picture button
P2RX1 SINFRUT00000157823 P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic receptor). [Source:Uniprot/SWISSPROT;Acc:P51575]
17.9466 -18.68 2.44772e-06 400 5 2 8 [+] picture button
DYNC2LI1 SINFRUT00000130818 dynein 2 light intermediate chain isoform 1 [Source:RefSeq_peptide;Acc:NP_057092]
16.2951 -11.7 2.53117e-06 400 4 2 6 [+] picture button
COL14A1 (2 of 2) SINFRUT00000153665 Collagen alpha-1(XIV) chain precursor (Undulin). [Source:Uniprot/SWISSPROT;Acc:Q05707]
16.2951 -15.64 2.60644e-06 400 4 3 6 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
17.7264 -14.55 5.45783e-06 400 7 2 13 [+] picture button
GRTP1 SINFRUT00000138432 growth hormone regulated TBC protein 1 [Source:RefSeq_peptide;Acc:NP_078995]
16.6254 -15.39 6.00022e-06 400 6 2 7 [+] picture button
CDC23 SINFRUT00000159406 Cell division cycle protein 23 homolog (Anaphase-promoting complex subunit 8) (APC8) (Cyclosome subunit 8). [Source:Uniprot/SWISSPROT;Acc:Q9UJX2]
16.3314 -14.28 6.02599e-06 400 2 1 2 [+] picture button
HRH2 (2 of 2) SINFRUT00000138905 Histamine H2 receptor (H2R) (Gastric receptor I). [Source:Uniprot/SWISSPROT;Acc:P25021]
16.4052 -18.4 8.29686e-06 400 4 2 4 [+] picture button
FBP1 SINFRUT00000139771 Fructose-1,6-bisphosphatase 1 (EC 3.1.3.11) (D-fructose-1,6- bisphosphate 1-phosphohydrolase 1) (FBPase 1). [Source:Uniprot/SWISSPROT;Acc:P09467]
16.1622 -20.34 8.37752e-06 400 8 2 15 [+] picture button
RBM35B SINFRUT00000158224 RNA-binding protein 35B (RNA-binding motif protein 35B). [Source:Uniprot/SWISSPROT;Acc:Q9H6T0]
16.7052 -15.7 8.39126e-06 400 3 2 5 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
19.9284 -22.86 8.58788e-06 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
16.2951 -18.92 9.0791e-06 400 9 2 12 [+] picture button
HS6ST2 SINFRUT00000166302 Heparan-sulfate 6-O-sulfotransferase 2 (EC 2.8.2.-) (HS6ST-2). [Source:Uniprot/SWISSPROT;Acc:Q96MM7]
16.7355 -18.37 9.19054e-06 400 5 2 4 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.185 -13.29 9.33749e-06 400 6 2 7 [+] picture button
FAM26A SINFRUT00000156543 Protein FAM26A. [Source:Uniprot/SWISSPROT;Acc:Q86XJ0]
16.5521 -18.16 9.8529e-06 400 3 2 3 [+] picture button
PPRC1 SINFRUT00000151552 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.1525 -17.27 9.85341e-06 400 5 4 8 [+] picture button
PIGV SINFRUT00000153727 GPI mannosyltransferase 2 (EC 2.4.1.-) (GPI mannosyltransferase II) (GPI-MT-II) (Phosphatidylinositol-glycan biosynthesis class V protein) (PIG-V). [Source:Uniprot/SWISSPROT;Acc:Q9NUD9]
16.4052 -18.67 1.08678e-05 400 8 3 14 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
16.6254 -18.18 1.12516e-05 400 4 3 7 [+] picture button
LDLRAD3 SINFRUT00000145809 low density lipoprotein receptor class A domain containing 3 [Source:RefSeq_peptide;Acc:NP_777562]
16.0749 -16.53 1.13254e-05 400 3 1 3 [+] picture button
FRMPD1 (2 of 2) SINFRUT00000140655 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
16.9557 -18.11 1.25395e-05 400 6 3 6 [+] picture button
ATAD2 SINFRUT00000152287 ATPase family AAA domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6PL18]
16.402 -17.29 1.33895e-05 400 7 2 8 [+] picture button
CENTD3 SINFRUT00000183259 Centaurin-delta 3 (Cnt-d3) (Arf-GAP, Rho-GAP, ankyrin repeat and pleckstrin homology domain-containing protein 3). [Source:Uniprot/SWISSPROT;Acc:Q8WWN8]
16.3733 -18.03 1.65748e-05 400 3 5 5 [+] picture button
SINFRUT00000148519 Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9]Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9] BY ORTHOLOGY TO:AGAP010338-RA
16.0749 -16.85 1.93405e-05 400 3 3 4 [+] picture button
FBXL14 (1 of 2) SINFRUT00000182941 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.451 -14.44 2.04223e-05 400 6 4 7 [+] picture button
SOCS3 (2 of 2) SINFRUT00000179268 Suppressor of cytokine signaling 3 (SOCS-3) (Cytokine-inducible SH2 protein 3) (CIS-3) (STAT-induced STAT inhibitor 3) (SSI-3). [Source:Uniprot/SWISSPROT;Acc:O14543]
18.0173 -24.35 2.05119e-05 400 4 3 5 [+] picture button
CLIP4 SINFRUT00000138713 CAP-Gly domain-containing linker protein 4 (Restin-like protein 2). [Source:Uniprot/SWISSPROT;Acc:Q8N3C7]
16.466 -17.62 2.0941e-05 400 6 9 17 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
16.9462 -14.35 2.10979e-05 400 8 3 12 [+] picture button
CYC1 SINFRUT00000151654 Cytochrome c1 heme protein, mitochondrial precursor (Cytochrome c-1). [Source:Uniprot/SWISSPROT;Acc:P08574]
17.3961 -16.51 2.3453e-05 400 5 3 5 [+] picture button
FAM78A SINFRUT00000127452 Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0]
16.185 -13.23 2.38578e-05 400 6 2 9 [+] picture button
MXD4 SINFRUT00000153473 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]
16.451 -16.18 3.08579e-05 400 4 2 7 [+] picture button

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Download table: GFF TXT
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