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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7i

791 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
17.5062 -16.72 9.20453e-14 400 6 3 10 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.4052 -17 1.11674e-10 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.5153 -14.42 5.55098e-10 400 4 3 5 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
16.6718 -19.47 2.81153e-08 400 4 2 6 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
18.2769 -17.26 2.94605e-08 400 2 4 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
16.7564 -17.3 6.19932e-08 400 4 12 5 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.7055 -20.62 9.98851e-08 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
16.9557 -20.89 1.69327e-07 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
19.1577 -30.17 1.88192e-07 400 4 1 6 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
17.1441 -18.07 2.7015e-07 400 4 3 5 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
19.4433 -23.72 3.52332e-07 400 5 2 7 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
17.1183 -20.65 3.54359e-07 400 5 2 9 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
16.2585 -15.44 4.19296e-07 400 3 4 5 [+] picture button
O73801_FUGRU SINFRUT00000158589 Serine/threonine kinase receptor type1. [Source:Uniprot/SPTREMBL;Acc:O73801]
16.3548 -17.37 8.22493e-07 400 2 7 3 [+] picture button
SLC5A9 SINFRUT00000144133 solute carrier family 5 (sodium/glucose cotransporter), member 9 [Source:RefSeq_peptide;Acc:NP_001011547]
16.9451 -15.38 8.77519e-07 400 3 2 4 [+] picture button
ACN9 SINFRUT00000183526 ACN9 protein homolog, mitochondrial precursor. [Source:Uniprot/SWISSPROT;Acc:Q9NRP4]
16.3244 -12.41 1.25358e-06 400 6 1 4 [+] picture button
NEU3 SINFRUT00000159385 Sialidase-3 (EC 3.2.1.18) (Membrane sialidase) (Ganglioside sialidase) (N-acetyl-alpha-neuraminidase 3). [Source:Uniprot/SWISSPROT;Acc:Q9UQ49]
16.6254 -15.93 1.48093e-06 400 7 3 9 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
16.8456 -15.01 1.49287e-06 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
16.3452 -16.51 1.51916e-06 400 2 3 2 [+] picture button
PRKCQ SINFRUT00000140695 Protein kinase C theta type (EC 2.7.11.13) (nPKC-theta). [Source:Uniprot/SWISSPROT;Acc:Q04759]
16.4052 -18.02 1.80558e-06 400 5 2 8 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
17.8365 -19.32 2.30348e-06 400 6 1 11 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
17.8064 -20.14 2.34134e-06 400 6 4 9 [+] picture button
P2RX1 SINFRUT00000157823 P2X purinoceptor 1 (ATP receptor) (P2X1) (Purinergic receptor). [Source:Uniprot/SWISSPROT;Acc:P51575]
16.4052 -16.14 2.44772e-06 400 5 2 8 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
18.8274 -27.91 2.61555e-06 400 5 4 6 [+] picture button
KIAA1411 SINFRUT00000129326 KIAA1411 (KIAA1411), mRNA [Source:RefSeq_dna;Acc:NM_020819]
16.5722 -24.12 2.75792e-06 400 5 4 6 [+] picture button
PDZRN3 SINFRUT00000145896 PDZ domain-containing RING finger protein 3 (Ligand of Numb-protein X 3) (Semaphorin cytoplasmic domain-associated protein 3) (Protein SEMACAP3). [Source:Uniprot/SWISSPROT;Acc:Q9UPQ7]
16.3105 -19.48 2.76799e-06 400 6 6 11 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
17.713 -17.17 4.89506e-06 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.7173 -22.22 5.45783e-06 400 7 2 13 [+] picture button
CDC23 SINFRUT00000159406 Cell division cycle protein 23 homolog (Anaphase-promoting complex subunit 8) (APC8) (Cyclosome subunit 8). [Source:Uniprot/SWISSPROT;Acc:Q9UJX2]
16.9935 -16.99 6.02599e-06 400 2 1 2 [+] picture button
BRP44L SINFRUT00000130233 Brain protein 44-like protein. [Source:Uniprot/SWISSPROT;Acc:Q9Y5U8]
16.3314 -16.24 7.06812e-06 400 5 2 7 [+] picture button
SGPL1 SINFRUT00000131149 Sphingosine-1-phosphate lyase 1 (EC 4.1.2.27) (SP-lyase) (hSPL) (Sphingosine-1-phosphate aldolase). [Source:Uniprot/SWISSPROT;Acc:O95470]
16.2534 -19.08 7.64886e-06 400 5 3 7 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
17.3961 -18 8.58788e-06 400 4 2 7 [+] picture button
ITIH5 SINFRUT00000140700 inter-alpha trypsin inhibitor heavy chain precursor 5 isoform 1 [Source:RefSeq_peptide;Acc:NP_085046]
16.2635 -20.68 8.59643e-06 400 4 1 5 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.8365 -20.45 9.0791e-06 400 9 2 12 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.6254 -13.01 9.33749e-06 400 6 2 7 [+] picture button
FAM26A SINFRUT00000156543 Protein FAM26A. [Source:Uniprot/SWISSPROT;Acc:Q86XJ0]
16.221 -17.34 9.8529e-06 400 3 2 3 [+] picture button
PPRC1 SINFRUT00000151552 peroxisome proliferator-activated receptor gamma, coactivator-related 1 [Source:RefSeq_peptide;Acc:NP_055877]
16.9432 -21.6 9.85341e-06 400 5 4 8 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.6163 -23.68 1.12516e-05 400 4 3 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
16.8456 -17.8 1.17599e-05 400 5 2 7 [+] picture button
PXMP2 SINFRUT00000155101 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
16.2302 -19.66 1.23984e-05 400 6 2 10 [+] picture button
FRMPD1 (2 of 2) SINFRUT00000140655 FERM and PDZ domain containing 1 [Source:RefSeq_peptide;Acc:NP_055722]
17.8365 -19.3 1.25395e-05 400 6 3 6 [+] picture button
ATAD2 SINFRUT00000152287 ATPase family AAA domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q6PL18]
16.402 -14.03 1.33895e-05 400 7 2 8 [+] picture button
C14orf115 SINFRUT00000152306 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
17.0699 -21.33 1.6302e-05 400 2 3 4 [+] picture button
HOXD3 SINFRUT00000131831 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
16.461 -20.27 1.90709e-05 400 9 4 16 [+] picture button
FBXL14 (1 of 2) SINFRUT00000182941 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.5614 -19.46 2.04223e-05 400 6 4 7 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
16.8354 -20.18 2.10979e-05 400 8 3 12 [+] picture button
ACVR2B SINFRUT00000161220 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.4052 -19.18 2.13481e-05 400 5 4 7 [+] picture button
ELMOD1 SINFRUT00000150373 ELMO domain-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q8N336]
16.5382 -15.97 2.16694e-05 400 3 1 4 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
17.4398 -23.57 2.27986e-05 400 7 2 13 [+] picture button
C18orf17 (1 of 2) SINFRUT00000132539 TPR repeat-containing protein C18orf17. [Source:Uniprot/SWISSPROT;Acc:Q8N584]
16.5153 -16.52 2.81638e-05 400 3 2 3 [+] picture button

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Download table: GFF TXT
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