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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7b

819 hits found.


Page 1 of 17
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.1668 -18.97 0.0000000000000920453 400 6 3 10 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
18.5436 -26 0.000000000000167919 400 5 4 5 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.5153 -22.04 0.000000000111674 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.6254 -14.13 0.000000000555098 400 4 3 5 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
18.7696 -29.06 0.0000000281153 400 4 2 6 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
19.1577 -22.37 0.0000000294605 400 2 4 5 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
18.1729 -26.1 0.0000000998851 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
18.387 -24.88 0.000000169327 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
18.6072 -27.98 0.000000188192 400 4 1 6 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
17.2554 -20.16 0.00000027015 400 4 3 5 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
19.8981 -26.8 0.000000352332 400 5 2 7 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
17.5258 -26.17 0.000000519952 400 9 4 16 [+] picture button
TNFSF10 (2 of 2) SINFRUT00000137638 Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (Apo-2 ligand) (Apo-2L) (CD253 antigen). [Source:Uniprot/SWISSPROT;Acc:P50591]
16.8456 -15.05 0.000000553588 400 4 4 6 [+] picture button
ARL5B SINFRUT00000134114 ADP-ribosylation factor-like protein 5B (ADP-ribosylation factor-like protein 8). [Source:Uniprot/SWISSPROT;Acc:Q96KC2]
16.6533 -27.25 0.000000615367 400 4 2 5 [+] picture button
SPRYD4 SINFRUT00000143869 SPRY domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8WW59]
16.4052 -17.36 0.000000653369 400 7 3 8 [+] picture button
TM7SF4 SINFRUT00000130745 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
16.8456 -18.37 0.000000883951 400 8 3 10 [+] picture button
VPS13D SINFRUT00000144014 Vacuolar protein sorting-associated protein 13D. [Source:Uniprot/SWISSPROT;Acc:Q5THJ4]
16.5153 -22.73 0.000000916993 400 4 2 6 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
17.5062 -17.98 0.00000149287 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
17.8914 -22.8 0.00000151916 400 2 3 2 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
18.1382 -21.59 0.00000234134 400 6 4 9 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
18.0567 -26.28 0.00000261555 400 5 4 6 [+] picture button
LRRC29 SINFRUT00000147741 Leucine-rich repeat-containing protein 29 (F-box/LRR-repeat protein 9) (F-box and leucine-rich repeat protein 9) (F-box protein FBL9). [Source:Uniprot/SWISSPROT;Acc:Q8WV35]
16.5153 -21.89 0.00000422148 400 4 2 6 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
17.9372 -26.72 0.00000489506 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.387 -22.53 0.00000545783 400 7 2 13 [+] picture button
WDR61 SINFRUT00000164000 WD repeat protein 61 (Meiotic recombination REC14 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q9GZS3]
16.7493 -19.78 0.00000671031 400 4 1 6 [+] picture button
STX18 SINFRUT00000139415 Syntaxin-18 (Cell growth-inhibiting gene 9 protein). [Source:Uniprot/SWISSPROT;Acc:Q9P2W9]
16.5153 -25.49 0.00000738765 400 6 3 9 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
16.5153 -21.49 0.00000858788 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.3961 -21.6 0.0000090791 400 9 2 12 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.7355 -15.49 0.00000933749 400 6 2 7 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.6163 -17.64 0.0000112516 400 4 3 7 [+] picture button
FGL2 SINFRUT00000156069 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
17.0031 -21.19 0.0000113587 400 5 4 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
16.8456 -21.5 0.0000117599 400 5 2 7 [+] picture button
PXMP2 SINFRUT00000155101 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
17.5551 -25.61 0.0000123984 400 6 2 10 [+] picture button
RAB32 SINFRUT00000183477 Ras-related protein Rab-32. [Source:Uniprot/SWISSPROT;Acc:Q13637]
17.1759 -27.32 0.0000145295 400 3 2 3 [+] picture button
SINFRUT00000129112 Homolog of Carassius auratus "Cytoplasmic polyadenylation element binding protein. [Source:Uniprot/SPTREMBL;Acc:Q9DED5]"
16.5622 -17.94 0.0000153383 400 8 9 15 [+] picture button
C14orf115 SINFRUT00000152306 Uncharacterized protein C14orf115. [Source:Uniprot/SWISSPROT;Acc:Q9H8Y1]
16.512 -18.96 0.000016302 400 2 3 4 [+] picture button
AP2S1 SINFRUT00000130860 AP-2 complex subunit sigma-1 (Adapter-related protein complex 2 sigma- 1 subunit) (Clathrin coat assembly protein AP17) (Clathrin coat- associated protein AP17) (Plasma membrane adaptor AP-2 17 kDa protein) (HA2 17 kDa subunit) (Clathrin assembly protein [Source:Uniprot/SWISSPROT;Acc:P53680]
16.9265 -18.92 0.0000182551 400 5 2 6 [+] picture button
HOXD3 SINFRUT00000131831 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
17.2396 -22.17 0.0000190709 400 9 4 16 [+] picture button
FBXL14 (1 of 2) SINFRUT00000182941 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
17.1135 -24.8 0.0000204223 400 6 4 7 [+] picture button
AMD1 SINFRUT00000128146 S-adenosylmethionine decarboxylase proenzyme (EC 4.1.1.50) (AdoMetDC) (SamDC) [Contains: S-adenosylmethionine decarboxylase alpha chain; S- adenosylmethionine decarboxylase beta chain]. [Source:Uniprot/SWISSPROT;Acc:P17707]
16.5521 -18.05 0.0000207267 400 5 2 4 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
17.3892 -19.23 0.0000210979 400 8 3 12 [+] picture button
CRYBA4 SINFRUT00000131939 Beta crystallin A4 (Beta-A4-crystallin). [Source:Uniprot/SWISSPROT;Acc:P53673]
16.6254 -18.5 0.0000227733 400 5 2 6 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
18.7643 -26.79 0.0000227986 400 7 2 13 [+] picture button
CYC1 SINFRUT00000151654 Cytochrome c1 heme protein, mitochondrial precursor (Cytochrome c-1). [Source:Uniprot/SWISSPROT;Acc:P08574]
16.7355 -22.29 0.000023453 400 5 3 5 [+] picture button
FAM78A SINFRUT00000127452 Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0]
17.6163 -21.87 0.0000238578 400 6 2 9 [+] picture button
NM_022659.2 SINFRUT00000178081 early B-cell factor 2 (EBF2), mRNA [Source:RefSeq_dna;Acc:NM_022659]
16.8456 -24.77 0.0000301059 400 5 3 6 [+] picture button
MXD4 SINFRUT00000153473 Max-interacting transcriptional repressor MAD4 (Max-associated protein 4) (MAX dimerization protein 4). [Source:Uniprot/SWISSPROT;Acc:Q14582]
18.2538 -24.33 0.0000308579 400 4 2 7 [+] picture button
ATPBD4 SINFRUT00000146274 ATP-binding domain protein 4. [Source:Uniprot/SWISSPROT;Acc:Q7L8W6]
16.7355 -23.71 0.0000318994 400 7 1 10 [+] picture button
SLC27A4 SINFRUT00000151747 Long-chain fatty acid transport protein 4 (EC 6.2.1.-) (Fatty acid transport protein 4) (FATP-4) (Solute carrier family 27 member 4). [Source:Uniprot/SWISSPROT;Acc:Q6P1M0]
18.6788 -22.12 0.0000344437 400 4 4 4 [+] picture button
DGCR8 SINFRUT00000163485 Protein DGCR8 (DiGeorge syndrome critical region 8). [Source:Uniprot/SWISSPROT;Acc:Q8WYQ5]
16.7355 -16.1 0.0000361371 400 5 4 9 [+] picture button

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Download table: GFF TXT
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