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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and fru-let-7a

785 hits found.


Page 1 of 16
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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YOD1 SINFRUT00000161202 Ubiquitin thioesterase OTU1 (EC 3.1.2.-) (OTU domain-containing protein 2) (HIV-1-induced protease 7) (HIN-7) (HsHIN7). [Source:Uniprot/SWISSPROT;Acc:Q5VVQ6]
18.8274 -22.52 0.0000000000000920453 400 6 3 10 [+] picture button
LIN28B SINFRUT00000134438 Lin-28 homolog B. [Source:Uniprot/SWISSPROT;Acc:Q6ZN17]
16.7775 -18.39 0.000000000000167919 400 5 4 5 [+] picture button
TRIM71 SINFRUT00000149715 Tripartite motif-containing protein 71 (Lin-41 homolog). [Source:Uniprot/SWISSPROT;Acc:Q2Q1W2]
16.5153 -17.2 0.000000000111674 400 4 4 4 [+] picture button
Q5FWF1_HUMAN SINFRUT00000146856 ADAMTS8 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5FWF1]
16.9557 -14.23 0.000000000555098 400 4 3 5 [+] picture button
SINFRUT00000162421 LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7]LOC500947 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5M7U7] BY ORTHOLOGY TO:ENSRNOT00000013927
17.8863 -22.58 0.0000000281153 400 4 2 6 [+] picture button
SEMA4C SINFRUT00000132551 Semaphorin-4C precursor. [Source:Uniprot/SWISSPROT;Acc:Q9C0C4]
19.1577 -20.39 0.0000000294605 400 2 4 5 [+] picture button
PIAS4 SINFRUT00000131617 E3 SUMO-protein ligase PIAS4 (Protein inhibitor of activated STAT protein 4) (Protein inhibitor of activated STAT protein gamma) (PIAS- gamma) (PIASy). [Source:Uniprot/SWISSPROT;Acc:Q8N2W9]
16.4698 -19.29 0.0000000595665 400 5 2 5 [+] picture button
NR6A1 SINFRUT00000164938 Orphan nuclear receptor NR6A1 (Germ cell nuclear factor) (GCNF) (Retinoid receptor-related testis-specific receptor) (RTR). [Source:Uniprot/SWISSPROT;Acc:Q15406]
16.8681 -16.43 0.0000000619932 400 4 12 5 [+] picture button
TARBP2 SINFRUT00000130069 TAR RNA-binding protein 2 (Trans-activation-responsive RNA-binding protein). [Source:Uniprot/SWISSPROT;Acc:Q15633]
16.8184 -17.65 0.0000000998851 400 3 7 11 [+] picture button
FRAS1 SINFRUT00000144951 Extracellular matrix protein FRAS1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q86XX4]
17.8365 -22.47 0.000000169327 400 8 7 11 [+] picture button
RDX (2 of 2) SINFRUT00000136411 Radixin. [Source:Uniprot/SWISSPROT;Acc:P35241]
17.7264 -21.91 0.000000188192 400 4 1 6 [+] picture button
ZNF644 SINFRUT00000135596 Zinc finger protein 644 (Zinc finger motif enhancer-binding protein 2) (Zep-2). [Source:Uniprot/SWISSPROT;Acc:Q9H582]
17.2554 -19.88 0.00000027015 400 4 3 5 [+] picture button
EPHA4 SINFRUT00000171307 Ephrin type-A receptor 4 precursor (EC 2.7.10.1) (Tyrosine-protein kinase receptor SEK) (Receptor protein-tyrosine kinase HEK8). [Source:Uniprot/SWISSPROT;Acc:P54764]
16.3498 -19.43 0.000000295206 400 5 10 10 [+] picture button
ZFYVE26 SINFRUT00000162143 zinc finger, FYVE domain containing 26 [Source:RefSeq_peptide;Acc:NP_056161]
18.9884 -21.77 0.000000352332 400 5 2 7 [+] picture button
GTF2E1 SINFRUT00000151320 Transcription initiation factor IIE subunit alpha (TFIIE-alpha) (General transcription factor IIE subunit 1) (General transcription factor IIE 56 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P29083]
16.5661 -16.83 0.000000354359 400 5 2 9 [+] picture button
SINFRUT00000180296 Homolog of Homo sapiens "Splice Isoform PTPS-MEB of Receptor-type tyrosine-protein phosphatase S precursor [Source:IPI;Acc:IPI00332272]"
16.3699 -13.19 0.000000419296 400 3 4 5 [+] picture button
FGF6 (2 of 2) SINFRUT00000130794 Fibroblast growth factor 6 precursor (FGF-6) (HBGF-6) (HST-2). [Source:Uniprot/SWISSPROT;Acc:P10767]
16.3056 -17.36 0.000000519952 400 9 4 16 [+] picture button
TNFSF10 (2 of 2) SINFRUT00000137638 Tumor necrosis factor ligand superfamily member 10 (TNF-related apoptosis-inducing ligand) (Protein TRAIL) (Apo-2 ligand) (Apo-2L) (CD253 antigen). [Source:Uniprot/SWISSPROT;Acc:P50591]
16.8456 -15.18 0.000000553588 400 4 4 6 [+] picture button
SPRYD4 SINFRUT00000143869 SPRY domain-containing protein 4. [Source:Uniprot/SWISSPROT;Acc:Q8WW59]
16.4052 -17.91 0.000000653369 400 7 3 8 [+] picture button
O73801_FUGRU SINFRUT00000158589 Serine/threonine kinase receptor type1. [Source:Uniprot/SPTREMBL;Acc:O73801]
16.5773 -17.08 0.000000822493 400 2 7 3 [+] picture button
TM7SF4 SINFRUT00000130745 Transmembrane 7 superfamily member 4 (Dendritic cell-specific transmembrane protein) (DC-STAMP) (IL-4-induced protein) (FIND). [Source:Uniprot/SWISSPROT;Acc:Q9H295]
16.2951 -15.82 0.000000883951 400 8 3 10 [+] picture button
PAPD4 SINFRUT00000151207 PAP associated domain containing 4 [Source:RefSeq_peptide;Acc:NP_776158]
18.0567 -18.29 0.00000149287 400 6 3 7 [+] picture button
C16orf35 SINFRUT00000182877 UPF0171 protein C16orf35 (Alpha globin regulatory element-containing gene protein) (Protein CGTHBA) (-14 gene protein). [Source:Uniprot/SWISSPROT;Acc:Q12980]
17.0079 -16.96 0.00000151916 400 2 3 2 [+] picture button
POLI SINFRUT00000162727 DNA polymerase iota (EC 2.7.7.7) (RAD30 homolog B) (Eta2). [Source:Uniprot/SWISSPROT;Acc:Q9UNA4]
16.5153 -12.73 0.00000230348 400 6 1 11 [+] picture button
C4orf8 (1 of 2) SINFRUT00000138279 Uncharacterized protein C4orf8 (Protein IT14). [Source:Uniprot/SWISSPROT;Acc:P78312]
16.3686 -17.07 0.00000234134 400 6 4 9 [+] picture button
SAMD5 (2 of 2) SINFRUT00000180059 sterile alpha motif domain containing 5 [Source:RefSeq_peptide;Acc:NP_001025231]
16.9557 -20.71 0.00000261555 400 5 4 6 [+] picture button
MESDC1 SINFRUT00000160630 Mesoderm development candidate 1. [Source:Uniprot/SWISSPROT;Acc:Q9H1K6]
17.3767 -19.77 0.00000489506 400 9 5 9 [+] picture button
FOXH1 SINFRUT00000156148 Forkhead box protein H1 (Forkhead activin signal transducer 1) (Fast- 1) (hFAST-1) (Forkhead activin signal transducer 2) (Fast-2). [Source:Uniprot/SWISSPROT;Acc:O75593]
18.0567 -19.7 0.00000545783 400 7 2 13 [+] picture button
C1orf131 SINFRUT00000156710 C1orf131 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7Z6H5]
16.2627 -13.03 0.00000639785 400 4 3 7 [+] picture button
WDR61 SINFRUT00000164000 WD repeat protein 61 (Meiotic recombination REC14 protein homolog). [Source:Uniprot/SWISSPROT;Acc:Q9GZS3]
16.3056 -13.28 0.00000671031 400 4 1 6 [+] picture button
NP_001027823.1 SINFRUT00000141310 alkaline phosphatase [Source:RefSeq_peptide;Acc:NP_001027823]
16.9557 -20.81 0.00000858788 400 4 2 7 [+] picture button
SIRT4 SINFRUT00000150780 NAD-dependent deacetylase sirtuin-4 (EC 3.5.1.-) (SIR2-like protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9Y6E7]
17.3961 -19.75 0.0000090791 400 9 2 12 [+] picture button
C20orf108 SINFRUT00000150262 Uncharacterized protein C20orf108. [Source:Uniprot/SWISSPROT;Acc:Q96KR6]
16.5153 -14.27 0.00000933749 400 6 2 7 [+] picture button
NOSIP (2 of 2) SINFRUT00000140156 Nitric oxide synthase-interacting protein (eNOS-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q9Y314]
16.2736 -19.47 0.0000109423 400 8 1 11 [+] picture button
KCNK6 SINFRUT00000153265 Potassium channel subfamily K member 6 (Inward rectifying potassium channel protein TWIK-2) (TWIK-originated similarity sequence). [Source:Uniprot/SWISSPROT;Acc:Q9Y257]
17.6163 -17.09 0.0000112516 400 4 3 7 [+] picture button
FGL2 SINFRUT00000156069 Fibroleukin precursor (Fibrinogen-like protein 2) (pT49). [Source:Uniprot/SWISSPROT;Acc:Q14314]
17.6655 -22.16 0.0000113587 400 5 4 7 [+] picture button
THUMPD2 SINFRUT00000168170 THUMP domain-containing protein 2. [Source:Uniprot/SWISSPROT;Acc:Q9BTF0]
17.1759 -19.3 0.0000117599 400 5 2 7 [+] picture button
C2orf40 SINFRUT00000181490 Esophageal cancer related gene 4 protein precursor. [Source:Uniprot/SWISSPROT;Acc:Q9H1Z8]
16.6254 -18.51 0.000012184 400 6 1 9 [+] picture button
PXMP2 SINFRUT00000155101 Peroxisomal membrane protein 2 (22 kDa peroxisomal membrane protein). [Source:Uniprot/SWISSPROT;Acc:Q9NR77]
16.5614 -22.62 0.0000123984 400 6 2 10 [+] picture button
SINFRUT00000156225 Homolog of Brachydanio rerio "Similar to tetratricopeptide repeat domain 4. [Source:Uniprot/SPTREMBL;Acc:Q7ZWG1]"
16.4052 -16.35 0.0000125863 400 5 2 4 [+] picture button
SINFRUT00000129112 Homolog of Carassius auratus "Cytoplasmic polyadenylation element binding protein. [Source:Uniprot/SPTREMBL;Acc:Q9DED5]"
17.2291 -20.7 0.0000153383 400 8 9 15 [+] picture button
HOXD3 SINFRUT00000131831 Homeobox protein Hox-D3 (Hox-4A). [Source:Uniprot/SWISSPROT;Acc:P31249]
16.3498 -17.06 0.0000190709 400 9 4 16 [+] picture button
SINFRUT00000148519 Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9]Probable mitochondrial 39S ribosomal protein L23 (L23mt) (MRP-L23). [Source:Uniprot/SWISSPROT;Acc:Q5TUE9] BY ORTHOLOGY TO:AGAP010338-RA
16.6254 -17.08 0.0000193405 400 3 3 4 [+] picture button
FBXL14 (1 of 2) SINFRUT00000182941 F-box/LRR-repeat protein 14 (F-box and leucine-rich repeat protein 14). [Source:Uniprot/SWISSPROT;Acc:Q8N1E6]
16.451 -20.55 0.0000204223 400 6 4 7 [+] picture button
Q7T077_FUGRU SINFRUT00000157526 Putative beta-2 adrenergic receptor. [Source:Uniprot/SPTREMBL;Acc:Q7T077]
17.5 -19.27 0.0000210979 400 8 3 12 [+] picture button
ACVR2B SINFRUT00000161220 Activin receptor type-2B precursor (EC 2.7.11.30) (Activin receptor type IIB) (ACTR-IIB). [Source:Uniprot/SWISSPROT;Acc:Q13705]
16.5153 -19.41 0.0000213481 400 5 4 7 [+] picture button
CRYBA4 SINFRUT00000131939 Beta crystallin A4 (Beta-A4-crystallin). [Source:Uniprot/SWISSPROT;Acc:P53673]
17.286 -19.4 0.0000227733 400 5 2 6 [+] picture button
FA2H SINFRUT00000159194 fatty acid 2-hydroxylase [Source:RefSeq_peptide;Acc:NP_077282]
17.7709 -22.15 0.0000227986 400 7 2 13 [+] picture button
FAM78A SINFRUT00000127452 Protein FAM78A. [Source:Uniprot/SWISSPROT;Acc:Q5JUQ0]
17.0658 -19.92 0.0000238578 400 6 2 9 [+] picture button
NM_022659.2 SINFRUT00000178081 early B-cell factor 2 (EBF2), mRNA [Source:RefSeq_dna;Acc:NM_022659]
16.4052 -14.99 0.0000301059 400 5 3 6 [+] picture button

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Download table: GFF TXT
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