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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and dre-miR-99

723 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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EIF2B3 SINFRUT00000164612 Translation initiation factor eIF-2B subunit gamma (eIF-2B GDP-GTP exchange factor subunit gamma). [Source:Uniprot/SWISSPROT;Acc:Q9NR50]
18.4101 -22.93 1e-06 400 7 1 2 [+] picture button
SLC25A17 (1 of 2) SINFRUT00000134670 Peroxisomal membrane protein PMP34 (34 kDa peroxisomal membrane protein) (Solute carrier family 25 member 17). [Source:Uniprot/SWISSPROT;Acc:O43808]
15.3041 -23.4 1e-06 400 10 1 4 [+] picture button
SSR3 SINFRUT00000133537 Translocon-associated protein subunit gamma (TRAP-gamma) (Signal sequence receptor subunit gamma) (SSR-gamma). [Source:Uniprot/SWISSPROT;Acc:Q9UNL2]
16.0749 -17.53 7.01469e-06 400 5 2 8 [+] picture button
TMEM166 SINFRUT00000176381 Transmembrane protein 166. [Source:Uniprot/SWISSPROT;Acc:Q9H8M9]
17.1759 -22.43 1.42141e-05 400 5 3 8 [+] picture button
Q9YGN1_FUGRU SINFRUT00000164841 Sand protein. [Source:Uniprot/SPTREMBL;Acc:Q9YGN1]
15.0839 -17.12 2.36418e-05 400 3 3 5 [+] picture button
DOPEY2 SINFRUT00000145788 Uncharacterized protein C21orf5. [Source:Uniprot/SWISSPROT;Acc:Q9Y3R5]
16.185 -12.75 2.44999e-05 400 7 2 13 [+] picture button
H2AFY SINFRUT00000160277 Core histone macro-H2A.1 (Histone macroH2A1) (mH2A1) (H2A.y) (H2A/y) (Medulloblastoma antigen MU-MB-50.205). [Source:Uniprot/SWISSPROT;Acc:O75367]
15.9648 -15.09 2.71821e-05 400 5 3 8 [+] picture button
RPRML SINFRUT00000182747 reprimo-like [Source:RefSeq_peptide;Acc:NP_981945]
15.9648 -17.52 2.9884e-05 400 10 3 14 [+] picture button
SINFRUT00000170856 Homolog of Gallus gallus "Alpha 1 type IIA collagen precursor. [Source:Uniprot/SPTREMBL;Acc:Q90W37]"
15.194 -12.78 4.20978e-05 400 5 1 3 [+] picture button
SHC2 SINFRUT00000137453 SHC-transforming protein 2 (SH2 domain protein C2) (Src homology 2 domain-containing-transforming protein C2) (Protein Sck). [Source:Uniprot/SWISSPROT;Acc:P98077]
14.5334 -13.51 4.81993e-05 400 6 2 7 [+] picture button
ACSL5 SINFRUT00000165455 Long-chain-fatty-acid--CoA ligase 5 (EC 6.2.1.3) (Long-chain acyl-CoA synthetase 5) (LACS 5). [Source:Uniprot/SWISSPROT;Acc:Q9ULC5]
15.3041 -16.07 5.19936e-05 400 4 1 9 [+] picture button
RRM2B SINFRUT00000140270 Ribonucleoside-diphosphate reductase M2 subunit B (EC 1.17.4.1) (TP53- inducible ribonucleotide reductase M2 B) (p53-inducible ribonucleotide reductase small subunit 2-like protein) (p53R2). [Source:Uniprot/SWISSPROT;Acc:Q7LG56]
15.0839 -15.85 5.3964e-05 400 12 2 18 [+] picture button
GNAL (2 of 2) SINFRUT00000151516 Guanine nucleotide-binding protein G(olf) subunit alpha (Adenylate cyclase-stimulating G alpha protein, olfactory type). [Source:Uniprot/SWISSPROT;Acc:P38405]
15.194 -23.11 5.67419e-05 400 2 2 4 [+] picture button
AIG1 SINFRUT00000147606 Androgen-induced protein 1 (AIG-1). [Source:Uniprot/SWISSPROT;Acc:Q9NVV5]
15.0077 -19.89 5.7632e-05 400 4 1 3 [+] picture button
ZFPM1 SINFRUT00000180923 Zinc finger protein ZFPM1 (Zinc finger protein multitype 1) (Friend of GATA protein 1) (Friend of GATA-1) (FOG-1). [Source:Uniprot/SWISSPROT;Acc:Q8IX07]
15.2927 -14.06 6.73789e-05 400 5 2 10 [+] picture button
ABCD4 SINFRUT00000174954 ATP-binding cassette sub-family D member 4 (Peroxisomal membrane protein 69) (PMP69) (Peroxisomal membrane protein 1-like) (PXMP1-L) (P70R). [Source:Uniprot/SWISSPROT;Acc:O14678]
15.705 -26.97 7.41371e-05 400 2 1 3 [+] picture button
KCNA7 SINFRUT00000171897 potassium voltage-gated channel, shaker-related subfamily, member 7 [Source:RefSeq_peptide;Acc:NP_114092]
14.8117 -15.45 8.14195e-05 400 6 1 7 [+] picture button
SINFRUT00000151264 Homolog of Brachydanio rerio "Synaptojanin 2 binding protein. [Source:Uniprot/SPTREMBL;Acc:Q7ZV59]"
14.6435 -22.45 9.58342e-05 400 3 1 1 [+] picture button
SERGEF SINFRUT00000151655 Secretion-regulating guanine nucleotide exchange factor (Guanine nucleotide exchange factor-related protein) (Deafness locus-associated putative guanine nucleotide exchange factor) (DelGEF). [Source:Uniprot/SWISSPROT;Acc:Q9UGK8]
16.4052 -17.23 0.000107972 400 5 2 9 [+] picture button
NP_659482.3 SINFRUT00000151146 MGC20983 protein (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q96CG5]
15.6344 -17.75 0.000119859 400 5 1 6 [+] picture button
C6orf182 SINFRUT00000150162 Uncharacterized protein C6orf182. [Source:Uniprot/SWISSPROT;Acc:Q8IYX8]
16.9557 -16.41 0.000149029 400 6 2 9 [+] picture button
CDX4 SINFRUT00000139303 Homeobox protein CDX-4 (Caudal-type homeobox protein 4). [Source:Uniprot/SWISSPROT;Acc:O14627]
17.8175 -15.95 0.000150133 400 4 3 6 [+] picture button
CCDC120 SINFRUT00000164831 Coiled-coil domain-containing protein 120. [Source:Uniprot/SWISSPROT;Acc:Q96HB5]
14.6995 -12.34 0.000150408 400 5 1 5 [+] picture button
Q9W6R4_FUGRU SINFRUT00000161960 Protein phosphatase 1. [Source:Uniprot/SPTREMBL;Acc:Q9W6R4]
14.6435 -14.55 0.000154965 400 6 2 9 [+] picture button
NP_001027857.1 SINFRUT00000150463 guanylate cyclase activator protein 2 [Source:RefSeq_peptide;Acc:NP_001027857]
15.3041 -14.26 0.000208527 400 5 2 9 [+] picture button
AQP1 SINFRUT00000130258 Aquaporin-1 (AQP-1) (Aquaporin-CHIP) (Water channel protein for red blood cells and kidney proximal tubule) (Urine water channel). [Source:Uniprot/SWISSPROT;Acc:P29972]
15.5109 -22.75 0.000210474 400 7 4 19 [+] picture button
VIT SINFRUT00000164507 Vitrin precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UXI7]
15.0839 -18.81 0.000222345 400 4 1 4 [+] picture button
CIDEB SINFRUT00000136374 Cell death activator CIDE-B (Cell death-inducing DFFA-like effector B). [Source:Uniprot/SWISSPROT;Acc:Q9UHD4]
17.8514 -15.59 0.000257294 400 5 1 8 [+] picture button
ADMR SINFRUT00000179909 Adrenomedullin receptor (AM-R). [Source:Uniprot/SWISSPROT;Acc:O15218]
16.3314 -22.14 0.000260728 400 4 2 8 [+] picture button
C1orf160 (2 of 2) SINFRUT00000174390 Uncharacterized protein C1orf160. [Source:Uniprot/SWISSPROT;Acc:Q9H0R3]
15.3644 -20.19 0.000265148 400 6 3 14 [+] picture button
HPSE SINFRUT00000175832 Heparanase precursor (EC 3.2.-.-) (Heparanase-1) (Hpa1) (Endo- glucoronidase) [Contains: Heparanase 8 kDa subunit; Heparanase 50 kDa subunit]. [Source:Uniprot/SWISSPROT;Acc:Q9Y251]
16.7728 -15.3 0.000267217 400 5 1 8 [+] picture button
GALNT11 SINFRUT00000165157 Polypeptide N-acetylgalactosaminyltransferase 11 (EC 2.4.1.41) (Protein-UDP acetylgalactosaminyltransferase 11) (UDP- GalNAc:polypeptide N-acetylgalactosaminyltransferase 11) (Polypeptide GalNAc transferase 11) (GalNAc-T11) (pp-GaNTase 11). [Source:Uniprot/SWISSPROT;Acc:Q8NCW6]
17.5062 -17.72 0.000274552 400 3 1 5 [+] picture button
Q7T2S2_FUGRU SINFRUT00000154263 Nicotinic acetylcholine receptor alpha 6a subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7T2S2]
14.9738 -13.48 0.000291952 400 3 2 5 [+] picture button
LRTM1 SINFRUT00000171739 Leucine-rich repeat and transmembrane domain-containing protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q9HBL6]
16.6446 -15.28 0.000318125 400 6 4 9 [+] picture button
SURF4_FUGRU SINFRUT00000137719 Surfeit locus protein 4. [Source:Uniprot/SWISSPROT;Acc:O57590]
15.8526 -13.71 0.000321232 400 3 2 5 [+] picture button
NP_060818.3 SINFRUT00000150024 CDNA FLJ11171 fis, clone PLACE1007317, weakly similar to Drosophila melanogaster Adrift mRNA. [Source:Uniprot/SPTREMBL;Acc:Q9NUS3]
15.0243 -18.53 0.000327857 400 6 2 7 [+] picture button
Q6WNS8_FUGRU SINFRUT00000130972 Transcription factor Sox9b. [Source:Uniprot/SPTREMBL;Acc:Q6WNS8]
15.2896 -16.03 0.00032883 400 9 7 11 [+] picture button
TM9SF2 SINFRUT00000144471 Transmembrane 9 superfamily protein member 2 precursor (p76). [Source:Uniprot/SWISSPROT;Acc:Q99805]
16.7775 -17.37 0.00034399 400 7 2 9 [+] picture button
SINFRUT00000138453 Homolog of Brachydanio rerio "Nodal-related-2 (Squint). [Source:Uniprot/SPTREMBL;Acc:O13144]"
15.9648 -17.89 0.00036854 400 7 2 6 [+] picture button
TCN2 SINFRUT00000155159 Transcobalamin-2 precursor (Transcobalamin II) (TCII) (TC II). [Source:Uniprot/SWISSPROT;Acc:P20062]
14.8637 -16.6 0.000389233 400 3 3 5 [+] picture button
ANKRD34 SINFRUT00000181155 ankyrin repeat domain 34 [Source:RefSeq_peptide;Acc:NP_001034977]
15.7446 -18.66 0.000405031 400 4 1 4 [+] picture button
RPL8 SINFRUT00000135734 60S ribosomal protein L8. [Source:Uniprot/SWISSPROT;Acc:P62917]
14.7536 -12.85 0.00045533 400 7 2 10 [+] picture button
CCDC51 SINFRUT00000152942 coiled-coil domain containing 51 [Source:RefSeq_peptide;Acc:NP_078937]
16.0749 -24.55 0.000459203 400 3 1 4 [+] picture button
ATP9A SINFRUT00000166896 Probable phospholipid-transporting ATPase IIA (EC 3.6.3.1) (ATPase class II type 9A) (ATPase IIA). [Source:Uniprot/SWISSPROT;Acc:O75110]
14.6435 -18.87 0.000459726 400 6 2 10 [+] picture button
NT5DC3 SINFRUT00000144583 5'-nucleotidase domain containing 3 isoform 2 [Source:RefSeq_peptide;Acc:NP_057659]
15.0839 -13.56 0.000503523 400 6 2 10 [+] picture button
CBARA1 SINFRUT00000176572 calcium binding atopy-related autoantigen 1 [Source:RefSeq_peptide;Acc:NP_006068]
14.7536 -14.48 0.00051907 400 6 2 12 [+] picture button
Q6ZRG4_HUMAN SINFRUT00000181347 CDNA FLJ46370 fis, clone TESTI4051858. [Source:Uniprot/SPTREMBL;Acc:Q6ZRG4]
14.6435 -12.52 0.000539932 400 6 2 7 [+] picture button
NP_056410.2 SINFRUT00000154367 Src homology 3 domain-containing guanine nucleotide exchange factor [Source:RefSeq_peptide;Acc:NP_056410]
14.6435 -22.73 0.000539932 400 5 2 5 [+] picture button
ATF7 (2 of 2) SINFRUT00000162582 Cyclic AMP-dependent transcription factor ATF-7 (Activating transcription factor 7) (Transcription factor ATF-A). [Source:Uniprot/SWISSPROT;Acc:P17544]
17.3961 -20.45 0.000542251 400 3 1 4 [+] picture button
SINFRUT00000150863 CG6650-PA [Source:RefSeq_peptide;Acc:NP_648685]CG6650-PA [Source:RefSeq_peptide;Acc:NP_648685] BY ORTHOLOGY TO:CG6650-RA
15.0243 -12.58 0.000555977 400 3 2 4 [+] picture button

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Download table: GFF TXT
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