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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and dre-miR-143

618 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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KIAA0090 SINFRUT00000178984 Uncharacterized protein KIAA0090 precursor. [Source:Uniprot/SWISSPROT;Acc:Q8N766]
16.5017 -15.96 5.35296e-07 400 5 1 8 [+] picture button
AMOT SINFRUT00000146664 Angiomotin. [Source:Uniprot/SWISSPROT;Acc:Q4VCS5]
18.371 -21.04 1.54378e-06 400 5 2 6 [+] picture button
SARS SINFRUT00000128308 Seryl-tRNA synthetase, cytoplasmic (EC 6.1.1.11) (Serine--tRNA ligase) (SerRS). [Source:Uniprot/SWISSPROT;Acc:P49591]
17.2643 -18.7 3.67834e-06 400 5 1 6 [+] picture button
XR_015829.1 SINFRUT00000155927 similar to chloride intracellular channel 1 (LOC732322), mRNA [Source:RefSeq_dna;Acc:XR_015829]
20.5754 -26.51 4.57543e-06 400 6 2 7 [+] picture button
C6orf162 SINFRUT00000156940 Uncharacterized protein C6orf162. [Source:Uniprot/SWISSPROT;Acc:Q96KF7]
16.4485 -17.56 1.16765e-05 400 3 1 3 [+] picture button
CXXC6 SINFRUT00000149238 CXXC-type zinc finger protein 6 (Leukemia-associated protein with a CXXC domain). [Source:Uniprot/SWISSPROT;Acc:Q8NFU7]
17.7529 -13.81 1.17114e-05 400 10 6 13 [+] picture button
NIPSNAP1 SINFRUT00000136314 Protein NipSnap1. [Source:Uniprot/SWISSPROT;Acc:Q9BPW8]
17.4139 -18.81 1.33069e-05 400 6 2 7 [+] picture button
RIPK1 SINFRUT00000165283 Receptor-interacting serine/threonine-protein kinase 1 (EC 2.7.11.1) (Serine/threonine-protein kinase RIP) (Cell death protein RIP) (Receptor-interacting protein). [Source:Uniprot/SWISSPROT;Acc:Q13546]
16.9323 -13.21 1.35262e-05 400 3 2 4 [+] picture button
DLK1 SINFRUT00000161818 Delta-like protein precursor (DLK) (pG2) [Contains: Fetal antigen 1 (FA1)]. [Source:Uniprot/SWISSPROT;Acc:P80370]
17.601 -17.08 1.62404e-05 400 6 1 5 [+] picture button
PDPN SINFRUT00000140483 Podoplanin precursor (Glycoprotein 36) (Gp36) (PA2.26 antigen) (T1A) (T1-alpha) (Aggrus). [Source:Uniprot/SWISSPROT;Acc:Q86YL7]
17.043 -16.61 2.90933e-05 400 5 1 7 [+] picture button
SVEP1 SINFRUT00000128123 polydom [Source:RefSeq_peptide;Acc:NP_699197]
16.4896 -11.16 3.48493e-05 400 8 6 12 [+] picture button
TMEM26 SINFRUT00000146389 Transmembrane protein 26. [Source:Uniprot/SWISSPROT;Acc:Q6ZUK4]
17.0957 -12.56 3.99858e-05 400 5 2 6 [+] picture button
PC SINFRUT00000146904 Pyruvate carboxylase, mitochondrial precursor (EC 6.4.1.1) (Pyruvic carboxylase) (PCB). [Source:Uniprot/SWISSPROT;Acc:P11498]
17.1536 -22.24 4.50986e-05 400 4 2 6 [+] picture button
CD53 SINFRUT00000129811 Leukocyte surface antigen CD53 (Cell surface glycoprotein CD53) (Tetraspanin-25) (Tspan-25). [Source:Uniprot/SWISSPROT;Acc:P19397]
16.8216 -17.25 4.82132e-05 400 3 1 4 [+] picture button
DYSF SINFRUT00000180004 Dysferlin (Dystrophy-associated fer-1-like protein) (Fer-1-like protein 1). [Source:Uniprot/SWISSPROT;Acc:O75923]
16.6003 -16.65 5.03438e-05 400 3 1 4 [+] picture button
DEGS1 SINFRUT00000130724 degenerative spermatocyte homolog 1, lipid desaturase [Source:RefSeq_peptide;Acc:NP_659004]
17.5963 -13.98 6.17199e-05 400 3 3 3 [+] picture button
APBA2 (1 of 2) SINFRUT00000144103 Amyloid beta A4 precursor protein-binding family A member 2 (Neuron- specific X11L protein) (Neuronal Munc18-1-interacting protein 2) (Mint-2) (Adapter protein X11beta). [Source:Uniprot/SWISSPROT;Acc:Q99767]
18.6169 -19.71 6.68986e-05 400 5 2 4 [+] picture button
SMAD5 SINFRUT00000175729 Mothers against decapentaplegic homolog 5 (SMAD 5) (Mothers against DPP homolog 5) (Smad5) (hSmad5) (JV5-1). [Source:Uniprot/SWISSPROT;Acc:Q99717]
17.5528 -19.5 7.62803e-05 400 6 2 6 [+] picture button
DRG1 SINFRUT00000168101 Developmentally-regulated GTP-binding protein 1 (DRG 1). [Source:Uniprot/SWISSPROT;Acc:Q9Y295]
16.4896 -12.18 8.75096e-05 400 5 1 5 [+] picture button
CCT5 SINFRUT00000165211 T-complex protein 1 subunit epsilon (TCP-1-epsilon) (CCT-epsilon). [Source:Uniprot/SWISSPROT;Acc:P48643]
16.4896 -13.84 9.2522e-05 400 6 5 10 [+] picture button
CRLF3 SINFRUT00000129458 cytokine receptor-like factor 3 [Source:RefSeq_peptide;Acc:NP_057070]
16.6003 -22.59 9.62728e-05 400 6 2 12 [+] picture button
TBX15 SINFRUT00000137119 T-box transcription factor TBX15 (T-box protein 15). [Source:Uniprot/SWISSPROT;Acc:Q96SF7]
16.9323 -13.59 9.75679e-05 400 5 4 9 [+] picture button
TIAM1 (1 of 2) SINFRUT00000161404 T-lymphoma invasion and metastasis-inducing protein 1 (TIAM-1 protein). [Source:Uniprot/SWISSPROT;Acc:Q13009]
16.379 -15.31 0.000104147 400 6 3 7 [+] picture button
VDP_HUMAN SINFRUT00000181631 General vesicular transport factor p115 (Transcytosis-associated protein) (TAP) (Vesicle docking protein). [Source:Uniprot/SWISSPROT;Acc:O60763]
17.7467 -21.05 0.000114799 400 6 1 7 [+] picture button
RASAL2 SINFRUT00000174344 Ras GTPase-activating protein nGAP (RAS protein activator-like 1). [Source:Uniprot/SWISSPROT;Acc:Q9UJF2]
16.4896 -20.08 0.000114915 400 6 1 8 [+] picture button
GCS1_HUMAN SINFRUT00000153484 Mannosyl-oligosaccharide glucosidase (EC 3.2.1.106) (Processing A- glucosidase I). [Source:Uniprot/SWISSPROT;Acc:Q13724]
16.6181 -17.57 0.000118912 400 5 2 6 [+] picture button
STRN (2 of 2) SINFRUT00000143483 Striatin. [Source:Uniprot/SWISSPROT;Acc:O43815]
16.8216 -16.69 0.000125773 400 12 2 15 [+] picture button
LRP12 SINFRUT00000138975 Low-density lipoprotein receptor-related protein 12 precursor (Suppressor of tumorigenicity protein 7). [Source:Uniprot/SWISSPROT;Acc:Q9Y561]
16.6375 -22.97 0.0001579 400 6 2 5 [+] picture button
Q7SZG0_FUGRU SINFRUT00000138243 Cytochrome P450 21A2. [Source:Uniprot/SPTREMBL;Acc:Q7SZG0]
16.711 -16.39 0.000162649 400 9 2 15 [+] picture button
HSPBAP1 SINFRUT00000129883 HSPB1-associated protein 1 (27 KdA heat shock protein-associated protein 1) (Protein associated with small stress protein 1). [Source:Uniprot/SWISSPROT;Acc:Q96EW2]
17.3177 -18.68 0.000169712 400 4 1 5 [+] picture button
NP_689704.3 SINFRUT00000162989 CDNA FLJ32569 fis, clone SPLEN2000134, weakly similar to CARBOXYPEPTIDASE S (EC 3.4.17.4). [Source:Uniprot/SPTREMBL;Acc:Q96DM4]
17.043 -17.32 0.000170284 400 7 2 10 [+] picture button
ATP5C1 SINFRUT00000140728 ATP synthase gamma chain, mitochondrial precursor (EC 3.6.3.14). [Source:Uniprot/SWISSPROT;Acc:P36542]
17.5398 -16.09 0.000178352 400 4 2 4 [+] picture button
FAM57A (2 of 2) SINFRUT00000144660 Protein FAM57A (CT120 protein). [Source:Uniprot/SWISSPROT;Acc:Q8TBR7]
17.6407 -16.06 0.000220334 400 7 3 11 [+] picture button
PEX3 SINFRUT00000147616 Peroxisomal biogenesis factor 3 (Peroxin-3) (Peroxisomal assembly protein PEX3). [Source:Uniprot/SWISSPROT;Acc:P56589]
16.711 -11.75 0.000239321 400 3 1 3 [+] picture button
PLD3 SINFRUT00000153666 Phospholipase D3 (EC 3.1.4.4) (PLD 3) (Choline phosphatase 3) (Phosphatidylcholine-hydrolyzing phospholipase D3) (HindIII K4L homolog) (Hu-K4). [Source:Uniprot/SWISSPROT;Acc:Q8IV08]
17.2643 -15.03 0.000258253 400 10 3 17 [+] picture button
TGIF1 SINFRUT00000147678 Homeobox protein TGIF1 (5'-TG-3'-interacting factor 1). [Source:Uniprot/SWISSPROT;Acc:Q15583]
17.122 -16.34 0.000269939 400 4 4 7 [+] picture button
ABCA4 SINFRUT00000161212 Retinal-specific ATP-binding cassette transporter (ATP-binding cassette sub-family A member 4) (RIM ABC transporter) (RIM protein) (RmP) (Stargardt disease protein). [Source:Uniprot/SWISSPROT;Acc:P78363]
18.1052 -23.08 0.000312285 400 3 3 4 [+] picture button
COTL1 SINFRUT00000145600 Coactosin-like protein. [Source:Uniprot/SWISSPROT;Acc:Q14019]
17.2873 -17.12 0.000321532 400 3 1 7 [+] picture button
DIAPH1 SINFRUT00000182265 Protein diaphanous homolog 1 (Diaphanous-related formin-1) (DRF1). [Source:Uniprot/SWISSPROT;Acc:O60610]
16.4896 -19.41 0.000360045 400 4 2 5 [+] picture button
SINFRUT00000133884 Homolog of Homo sapiens "Transcription factor 21 [Source:IPI;Acc:IPI00306587]"
16.4896 -11.87 0.000383245 400 6 3 7 [+] picture button
SINFRUT00000128349 Homolog of Brachydanio rerio "Interferon-stimulated transcription factor 3, gamma 48kDa. [Source:Uniprot/SPTREMBL;Acc:Q6TGZ1]"
16.8216 -22.53 0.000401726 400 6 1 6 [+] picture button
TBN SINFRUT00000134298 TBP-associated factor 8 [Source:RefSeq_peptide;Acc:NP_612639]
18.6767 -28.74 0.000414768 400 4 2 6 [+] picture button
ADSL SINFRUT00000177480 Adenylosuccinate lyase (EC 4.3.2.2) (Adenylosuccinase) (ASL) (ASASE). [Source:Uniprot/SWISSPROT;Acc:P30566]
16.666 -13.4 0.000429642 400 5 3 7 [+] picture button
PGRMC1 SINFRUT00000143799 Membrane-associated progesterone receptor component 1 (mPR). [Source:Uniprot/SWISSPROT;Acc:O00264]
16.7484 -15.33 0.000449703 400 6 4 13 [+] picture button
NP_055304.1 (1 of 2) SINFRUT00000136710 FGF receptor activating protein 1 [Source:RefSeq_peptide;Acc:NP_055304]
16.898 -15.01 0.000450127 400 7 2 9 [+] picture button
LCP2 SINFRUT00000158827 Lymphocyte cytosolic protein 2 (SH2 domain-containing leukocyte protein of 76 kDa) (SLP-76 tyrosine phosphoprotein) (SLP76). [Source:Uniprot/SWISSPROT;Acc:Q13094]
17.6765 -15.12 0.000453015 400 4 1 5 [+] picture button
ARHGAP12 (1 of 2) SINFRUT00000156434 Rho GTPase-activating protein 12. [Source:Uniprot/SWISSPROT;Acc:Q8IWW6]
17.9668 -13.71 0.000454818 400 4 2 6 [+] picture button
ZNF710 (1 of 2) SINFRUT00000145566 Zinc finger protein 710. [Source:Uniprot/SWISSPROT;Acc:Q8N1W2]
16.8737 -13.14 0.000456645 400 5 4 6 [+] picture button
TMIGD1 SINFRUT00000154365 Transmembrane and immunoglobulin domain-containing protein 1 precursor. [Source:Uniprot/SWISSPROT;Acc:Q6UXZ0]
16.6003 -18.74 0.00049602 400 6 1 6 [+] picture button
NP_001027847.1 SINFRUT00000180599 muscleblind-like X-linked protein [Source:RefSeq_peptide;Acc:NP_001027847]
16.379 -13.85 0.000498638 400 7 1 11 [+] picture button

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Download table: GFF TXT
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