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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Takifugu rubripes and dre-miR-141

944 hits found.


Page 1 of 19
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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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PDCD4 SINFRUT00000127227 Programmed cell death protein 4 (Nuclear antigen H731-like) (Neoplastic transformation inhibitor protein) (Protein 197/15a). [Source:Uniprot/SWISSPROT;Acc:Q53EL6]
16.4464 -12.09 0.0000000605387 400 6 11 9 [+] picture button
TSC1 (1 of 2) SINFRUT00000138853 Hamartin (Tuberous sclerosis 1 protein). [Source:Uniprot/SWISSPROT;Acc:Q92574]
16.4056 -16.92 0.000000103313 400 4 2 5 [+] picture button
DYNC1I1 SINFRUT00000183288 Cytoplasmic dynein 1 intermediate chain 1 (Dynein intermediate chain 1, cytosolic) (DH IC-1) (Cytoplasmic dynein intermediate chain 1). [Source:Uniprot/SWISSPROT;Acc:O14576]
17.5103 -16.16 0.000000113074 400 8 2 16 [+] picture button
CRSP9 SINFRUT00000152779 Cofactor required for Sp1 transcriptional activation subunit 9 (Transcriptional coactivator CRSP33) (RNA polymerase transcriptional regulation mediator subunit 7 homolog) (hMED7) (Activator-recruited cofactor 34 kDa component) (ARC34). [Source:Uniprot/SWISSPROT;Acc:O43513]
16.2256 -12.94 0.000000209426 400 6 7 9 [+] picture button
NP_001027732.1 SINFRUT00000159262 melanocortin receptor-1 [Source:RefSeq_peptide;Acc:NP_001027732]
16.8456 -18.08 0.000000235331 400 3 5 9 [+] picture button
SINFRUT00000179051 NOT ANNOTATED
16.4052 -15.06 0.000001 400 10 1 6 [+] picture button
ELAVL2 SINFRUT00000180753 ELAV-like protein 2 (Hu-antigen B) (HuB) (ELAV-like neuronal protein 1) (Nervous system-specific RNA-binding protein Hel-N1). [Source:Uniprot/SWISSPROT;Acc:Q12926]
17.6211 -14.17 0.00000224711 400 7 6 11 [+] picture button
TAGLN3 SINFRUT00000158375 Transgelin-3 (Neuronal protein NP25) (Neuronal protein 22) (NP22). [Source:Uniprot/SWISSPROT;Acc:Q9UI15]
17.8762 -13.18 0.000002691 400 4 6 6 [+] picture button
PTPRG (1 of 2) SINFRUT00000171758 Receptor-type tyrosine-protein phosphatase gamma precursor (EC 3.1.3.48) (Protein-tyrosine phosphatase gamma) (R-PTP-gamma). [Source:Uniprot/SWISSPROT;Acc:P23470]
17.0562 -13.65 0.00000312924 400 3 12 12 [+] picture button
SLC16A3 (1 of 2) SINFRUT00000129089 Monocarboxylate transporter 4 (MCT 4) (MCT 3) (Solute carrier family 16 member 3). [Source:Uniprot/SWISSPROT;Acc:O15427]
16.7728 -12.24 0.00000475803 400 5 1 8 [+] picture button
TRHDE SINFRUT00000167721 Thyrotropin-releasing hormone-degrading ectoenzyme (EC 3.4.19.6) (TRH- degrading ectoenzyme) (TRH-DE) (TRH-specific aminopeptidase) (Thyroliberinase) (Pyroglutamyl-peptidase II) (PAP-II). [Source:Uniprot/SWISSPROT;Acc:Q9UKU6]
16.5153 -10.91 0.00000505674 400 8 6 10 [+] picture button
ZEB2 SINFRUT00000153632 Zinc finger E-box-binding homeobox 2 (Zinc finger homeobox protein 1b) (Smad-interacting protein 1) (SMADIP1). [Source:Uniprot/SWISSPROT;Acc:O60315]
16.8159 -11.95 0.0000053564 400 8 14 15 [+] picture button
HAT1 SINFRUT00000149397 Histone acetyltransferase type B catalytic subunit (EC 2.3.1.48). [Source:Uniprot/SWISSPROT;Acc:O14929]
16.7355 -17.28 0.00000819522 400 9 2 14 [+] picture button
NOL12 SINFRUT00000147784 Nucleolar protein 12. [Source:Uniprot/SWISSPROT;Acc:Q9UGY1]
17.6163 -16.39 0.00000835004 400 2 2 6 [+] picture button
C3orf23 SINFRUT00000133752 Uncharacterized protein C3orf23. [Source:Uniprot/SWISSPROT;Acc:Q8N3R3]
16.8456 -20.08 0.00000835297 400 8 3 15 [+] picture button
LENG8 SINFRUT00000129227 leukocyte receptor cluster (LRC) member 8 [Source:RefSeq_peptide;Acc:NP_443157]
16.2951 -13.63 0.0000105552 400 9 4 19 [+] picture button
PLEKHA2 SINFRUT00000154992 Pleckstrin homology domain-containing family A member 2 (Tandem PH domain-containing protein 2) (TAPP-2). [Source:Uniprot/SWISSPROT;Acc:Q9HB19]
16.5153 -12.82 0.0000142235 400 7 2 10 [+] picture button
C1orf21 (1 of 2) SINFRUT00000168166 Uncharacterized protein C1orf21 (Proliferation-inducing gene 13 protein). [Source:Uniprot/SWISSPROT;Acc:Q9H246]
15.9542 -8.9 0.000016111 400 4 2 7 [+] picture button
C10orf63 (2 of 2) SINFRUT00000181875 Enkurin. [Source:Uniprot/SWISSPROT;Acc:Q8TC29]
17.6163 -16.22 0.0000176169 400 6 1 13 [+] picture button
DCLRE1C SINFRUT00000131827 Artemis protein (EC 3.1.-.-) (DNA cross-link repair 1C protein) (SNM1- like protein) (A-SCID protein) (hSNM1C). [Source:Uniprot/SWISSPROT;Acc:Q96SD1]
16.4052 -17.5 0.0000194617 400 5 1 10 [+] picture button
INPP5B SINFRUT00000157508 Type II inositol-1,4,5-trisphosphate 5-phosphatase precursor (EC 3.1.3.36) (Phosphoinositide 5-phosphatase) (5PTase) (75 kDa inositol polyphosphate-5-phosphatase). [Source:Uniprot/SWISSPROT;Acc:P32019]
16.6446 -12.79 0.000019722 400 4 1 5 [+] picture button
FOXJ1 SINFRUT00000132090 Forkhead box protein J1 (Forkhead-related protein FKHL13) (Hepatocyte nuclear factor 3 forkhead homolog 4) (HFH-4). [Source:Uniprot/SWISSPROT;Acc:Q92949]
16.0749 -13.37 0.0000210615 400 4 2 6 [+] picture button
WDR41 SINFRUT00000136485 WD repeat protein 41. [Source:Uniprot/SWISSPROT;Acc:Q9HAD4]
16.4052 -18.47 0.0000226581 400 7 2 10 [+] picture button
Q9PSA7_FUGRU SINFRUT00000143523 D2-type dopamine receptor homolog. [Source:Uniprot/SPTREMBL;Acc:Q9PSA7]
17.3961 -15.25 0.0000250548 400 5 4 7 [+] picture button
RNMT SINFRUT00000135983 mRNA cap guanine-N7 methyltransferase (EC 2.1.1.56) (mRNA (guanine- N(7)-)-methyltransferase) (RG7MT1) (mRNA cap methyltransferase) (hcm1p) (hCMT1) (hMet). [Source:Uniprot/SWISSPROT;Acc:O43148]
16.8014 -13.9 0.000028034 400 3 3 6 [+] picture button
RAC3 SINFRUT00000180976 Ras-related C3 botulinum toxin substrate 3 precursor (p21-Rac3). [Source:Uniprot/SWISSPROT;Acc:P60763]
17.0658 -17.4 0.0000302659 400 8 3 13 [+] picture button
Q9H8A7_HUMAN (1 of 2) SINFRUT00000130629 CDNA FLJ13814 fis, clone THYRO1000368. [Source:Uniprot/SPTREMBL;Acc:Q9H8A7]
17.1926 -14.71 0.0000306184 400 4 3 13 [+] picture button
GRHL3 SINFRUT00000161863 Grainyhead-like protein 3 homolog (Sister of mammalian grainyhead) (Transcription factor CP2-like 4). [Source:Uniprot/SWISSPROT;Acc:Q8TE85]
17.943 -10.18 0.0000345491 400 5 3 9 [+] picture button
NP_057563.3 SINFRUT00000173984 scotin [Source:RefSeq_peptide;Acc:NP_057563]
16.2951 -14.8 0.0000347505 400 7 1 9 [+] picture button
SINFRUT00000155082 Homolog of Homo sapiens "glycolipid transfer protein [Source:RefSeq_peptide;Acc:NP_057517]"
16.2426 -14.13 0.0000394819 400 7 1 9 [+] picture button
BLZF1 SINFRUT00000133114 Golgin 45 (Basic leucine zipper nuclear factor 1) (JEM-1) (p45 basic leucine-zipper nuclear factor). [Source:Uniprot/SWISSPROT;Acc:Q9H2G9]
16.6254 -12.44 0.0000422826 400 5 4 11 [+] picture button
SAR1A SINFRUT00000152512 GTP-binding protein SAR1a (COPII-associated small GTPase). [Source:Uniprot/SWISSPROT;Acc:Q9NR31]
16.1568 -10.07 0.000043073 400 4 2 8 [+] picture button
MTX2 SINFRUT00000153158 Metaxin-2. [Source:Uniprot/SWISSPROT;Acc:O75431]
18.1668 -19.97 0.000044881 400 4 2 8 [+] picture button
TMEM165 SINFRUT00000133468 Transmembrane protein 165 (Transmembrane protein TPARL) (Transmembrane protein PT27). [Source:Uniprot/SWISSPROT;Acc:Q9HC07]
16.5153 -15.09 0.0000452982 400 4 2 7 [+] picture button
COPS3 (2 of 2) SINFRUT00000127438 COP9 signalosome complex subunit 3 (Signalosome subunit 3) (SGN3) (JAB1-containing signalosome subunit 3). [Source:Uniprot/SWISSPROT;Acc:Q9UNS2]
16.7004 -10.76 0.0000506051 400 7 4 9 [+] picture button
GAD1 (2 of 2) SINFRUT00000149372 Glutamate decarboxylase 1 (EC 4.1.1.15) (Glutamate decarboxylase 67 kDa isoform) (GAD-67) (67 kDa glutamic acid decarboxylase). [Source:Uniprot/SWISSPROT;Acc:Q99259]
19.0476 -24.98 0.0000513928 400 6 2 6 [+] picture button
NKD1 SINFRUT00000174414 naked cuticle homolog 1 [Source:RefSeq_peptide;Acc:NP_149110]
17.286 -14.49 0.0000515387 400 7 2 9 [+] picture button
EPN1 SINFRUT00000161387 Epsin-1 (EPS-15-interacting protein 1) (EH domain-binding mitotic phosphoprotein). [Source:Uniprot/SWISSPROT;Acc:Q9Y6I3]
16.5153 -15.84 0.0000516178 400 7 1 10 [+] picture button
Q7T2R9_FUGRU SINFRUT00000147567 Nicotinic acetylcholine receptor alpha 8b subunit (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q7T2R9]
16.6254 -15.69 0.0000549133 400 3 3 6 [+] picture button
MEF2C (2 of 2) SINFRUT00000165807 Myocyte-specific enhancer factor 2C. [Source:Uniprot/SWISSPROT;Acc:Q06413]
17.9801 -21.41 0.0000580455 400 3 3 10 [+] picture button
LENG4 SINFRUT00000138824 leukocyte receptor cluster (LRC) member 4 protein [Source:RefSeq_peptide;Acc:NP_077274]
15.9648 -17.66 0.0000607895 400 5 2 7 [+] picture button
NRSN1 SINFRUT00000171024 Neurensin-1 (Vesicular membrane protein p24) (Vesicular membrane protein of 24 kDa) (Neuro-p24). [Source:Uniprot/SWISSPROT;Acc:Q8IZ57]
16.3786 -12.53 0.0000642662 400 8 1 11 [+] picture button
SLC38A4 SINFRUT00000139064 Sodium-coupled neutral amino acid transporter 4 (Na(+)-coupled neutral amino acid transporter 4) (Amino acid transporter A3) (System A amino acid transporter 3) (System N amino acid transporter 3) (Solute carrier family 38 member 4). [Source:Uniprot/SWISSPROT;Acc:Q969I6]
19.3005 -20.25 0.0000642794 400 6 1 9 [+] picture button
SINFRUT00000135593 Homolog of Homo sapiens "CAMP-dependent protein kinase CatalytiC subunit alpha isoform 1 [Source:IPI;Acc:IPI00396630]"
17.4447 -19.95 0.000064395 400 4 4 6 [+] picture button
SULF1 SINFRUT00000127358 Extracellular sulfatase Sulf-1 precursor (EC 3.1.6.-) (HSulf-1). [Source:Uniprot/SWISSPROT;Acc:Q8IWU6]
18.6461 -18.67 0.0000696013 400 7 4 11 [+] picture button
Q802A5_FUGRU SINFRUT00000128050 C16orf8-like protein. [Source:Uniprot/SPTREMBL;Acc:Q802A5]
17.7264 -17.77 0.0000745832 400 8 3 12 [+] picture button
COASY SINFRUT00000164238 Bifunctional coenzyme A synthase (CoA synthase) (NBP) (POV-2) [Includes: Phosphopantetheine adenylyltransferase (EC 2.7.7.3) (Pantetheine-phosphate adenylyltransferase) (PPAT) (Dephospho-CoA pyrophosphorylase); Dephospho-CoA kinase (EC 2.7.1.24) (DPCK) (D [Source:Uniprot/SWISSPROT;Acc:Q13057]
16.7355 -19.31 0.000076342 400 7 2 10 [+] picture button
SINFRUT00000148655 Homolog of Homo sapiens "FYVE, RhoGEF and PH domain containing 6 [Source:RefSeq_peptide;Acc:NP_060821]"
17.0569 -14.58 0.0000781798 400 6 2 9 [+] picture button
SINFRUT00000176898 Homolog of Brachydanio rerio "Zisp protein. [Source:Uniprot/SPTREMBL;Acc:Q8AYN4]"
17.1759 -13.79 0.0000788385 400 5 4 9 [+] picture button
YIPF3 SINFRUT00000140045 Protein YIPF3 (YIP1 family member 3) (Killer lineage protein 1) (Natural killer cell-specific antigen KLIP1). [Source:Uniprot/SWISSPROT;Acc:Q9GZM5]
17.3961 -11.19 0.0000799441 400 3 1 5 [+] picture button

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Download table: GFF TXT
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