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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cel-miR-266

113 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG23021 ENSCBRT00000008855 Tax1 (Human T-cell leukemia virus type I) binding protein 3. [Source:Uniprot/SPTREMBL;Acc:Q6P4W4]Tax1 (Human T-cell leukemia virus type I) binding protein 3. [Source:Uniprot/SPTREMBL;Acc:Q6P4W4] BY ORTHOLOGY TO:ENSXETT00000012770
17.6086 -25.27 0.000001 1300 6 1 3 [+] picture button
CBG12139 ENSCBRT00000013296 TropoNin T family member (tnt-4) [Source:RefSeq_peptide;Acc:NP_503544]TropoNin T family member (tnt-4) [Source:RefSeq_peptide;Acc:NP_503544] BY ORTHOLOGY TO:T08B1.2a
18.1071 -24.75 0.0000122052 1300 3 1 4 [+] picture button
CBG20951 ENSCBRT00000000611 Serpentine Receptor, class E (epsilon) family member (sre-41) [Source:RefSeq_peptide;Acc:NP_496628]Serpentine Receptor, class E (epsilon) family member (sre-41) [Source:RefSeq_peptide;Acc:NP_496628] BY ORTHOLOGY TO:Y57A10B.5
17.1013 -18.65 0.00017845 1300 7 1 6 [+] picture button
CBG17724 ENSCBRT00000000169 Protein sidekick homolog precursor (Neuronal IgCAM protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9N3X8]Protein sidekick homolog precursor (Neuronal IgCAM protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9N3X8] BY ORTHOLOGY TO:Y42H9B.2
17.2145 -17.79 0.000233612 1300 5 2 9 [+] picture button
CBG19194 ENSCBRT00000013360 The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase]The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] BY ORTHOLOGY TO:F21C10.8b
16.2091 -18.91 0.000754955 1300 5 2 4 [+] picture button
CBG21465 ENSCBRT00000002718 Y59C2A.1 [Source:RefSeq_peptide;Acc:NP_494213]Y59C2A.1 [Source:RefSeq_peptide;Acc:NP_494213] BY ORTHOLOGY TO:Y59C2A.1
16.1699 -17.3 0.000788208 1300 1 1 3 [+] picture button
CBG04317 ENSCBRT00000007687 C56C10.10 [Source:RefSeq_peptide;Acc:NP_495339]C56C10.10 [Source:RefSeq_peptide;Acc:NP_495339] BY ORTHOLOGY TO:C56C10.10
15.6808 -12.94 0.0011005 1300 9 1 9 [+] picture button
CBG23347 ENSCBRT00000011461 Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 (EC 3.2.1.113) (Processing alpha-1,2-mannosidase C52E4.5) (Alpha-1,2-mannosidase C52E4.5). [Source:Uniprot/SWISSPROT;Acc:Q18788]Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 (EC 3.2.1.113) (Processing alpha-1,2-mannosidase C52E4.5) (Alpha-1,2-mannosidase C52E4.5). [Source:Uniprot/SWISSPROT;Acc:Q18788] BY ORTHOLOGY TO:C52E4.5
16.1115 -20.23 0.00118427 1300 7 2 12 [+] picture button
CBG24569 ENSCBRT00000009791 F11G11.12 [Source:RefSeq_peptide;Acc:NP_494880]F11G11.12 [Source:RefSeq_peptide;Acc:NP_494880] BY ORTHOLOGY TO:F11G11.12
16.5996 -16.8 0.00158774 1300 4 2 6 [+] picture button
CBG21741 ENSCBRT00000004547 The unc-129 gene encodes a member of the TGF-beta family of secreted growth factor signaling molecules. UNC-129 is required for proper axonal guidance of commissural motorneurons and for proper migration of the distal tip cells of the somatic gonad. UNC-129 is expressed in dorsal body wall muscle and at present does not appear to act through the known TGF-beta type I and II receptors. [Source: WormBase]The unc-129 gene encodes a member of the TGF-beta family of secreted growth factor signaling molecules. UNC-129 is required for proper axonal guidance of commissural motorneurons and for proper migration of the distal tip cells of the somatic gonad. UNC-129 is expressed in dorsal body wall muscle and at present does not appear to act through the known TGF-beta type I and II receptors. [Source: WormBase] BY ORTHOLOGY TO:C53D6.2
16.076 -22.56 0.00159196 1300 7 2 9 [+] picture button
CBG08798 ENSCBRT00000000553 ZC266.2 [Source:RefSeq_peptide;Acc:NP_504265]ZC266.2 [Source:RefSeq_peptide;Acc:NP_504265] BY ORTHOLOGY TO:ZC266.2
15.9699 -22.98 0.00170811 1300 6 1 5 [+] picture button
CBG08654 ENSCBRT00000002952 K11D12.11 [Source:RefSeq_peptide;Acc:NP_504352]K11D12.11 [Source:RefSeq_peptide;Acc:NP_504352] BY ORTHOLOGY TO:K11D12.11
16.2962 -24.46 0.00237422 1300 6 2 11 [+] picture button
CBG09720 ENSCBRT00000005690 C29A12.6 [Source:RefSeq_peptide;Acc:NP_505768]C29A12.6 [Source:RefSeq_peptide;Acc:NP_505768] BY ORTHOLOGY TO:C29A12.6
15.739 -16.95 0.00278731 1300 6 1 4 [+] picture button
CBG20858 ENSCBRT00000001285 C01G12.1 [Source:RefSeq_peptide;Acc:NP_497028]C01G12.1 [Source:RefSeq_peptide;Acc:NP_497028] BY ORTHOLOGY TO:C01G12.1
16.5737 -16.4 0.00305163 1300 7 1 12 [+] picture button
CBG21720 ENSCBRT00000004567 rap1 andrap1 and BY ORTHOLOGY TO:AAEL009377-RA
15.3949 -20.24 0.0031117 1300 4 1 3 [+] picture button
CBG12516 ENSCBRT00000014316 Putative ribosomal protein S6 kinase alpha-1 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:Q21734]Putative ribosomal protein S6 kinase alpha-1 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:Q21734] BY ORTHOLOGY TO:T01H8.1c
15.6136 -17.78 0.00315894 1300 2 1 2 [+] picture button
CBG12923 ENSCBRT00000013739 slo-1 mutants have wild-type levels of motor activity, but have less smooth movement and tend to stop and reverse direction. [Source: WormBase]slo-1 mutants have wild-type levels of motor activity, but have less smooth movement and tend to stop and reverse direction. [Source: WormBase] BY ORTHOLOGY TO:Y51A2D.19b
15.6734 -22.78 0.00324592 1300 3 1 5 [+] picture button
CBG01967 ENSCBRT00000005839 ZC373.4 [Source:RefSeq_peptide;Acc:NP_509689]ZC373.4 [Source:RefSeq_peptide;Acc:NP_509689] BY ORTHOLOGY TO:ZC373.4
15.5756 -18.96 0.00365683 1300 3 2 4 [+] picture button
CBG01980 ENSCBRT00000005854 unc-58 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. unc-58 was originally defined by gain-of-function (gf) mutations that result in paralysis and a shortened (dumpy) body morphology due to hypercontraction of body wall muscle. unc-58 gf mutations also result in constitutive egg-laying. as loss of UNC-58 function via reversion or RNA-mediated interference (RNAi) results in either no abnormalities or only a weakly uncoordinated phenotype, UNC-58 likely functions redudantly with other TWK channels to regulate locomotion and egg-laying. UNC-58 is expressed in motor neurons and interneurons. [Source: WormBase]unc-58 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. unc-58 was originally defined by gain-of-function (gf) mutations that result in paralysis and a shortened (dumpy) body morphology due to hypercontraction of body wall muscle. unc-58 gf mutations also result in constitutive egg-laying. as loss of UNC-58 function via reversion or RNA-mediated interference (RNAi) results in either no abnormalities or only a weakly uncoordinated phenotype, UNC-58 likely functions redudantly with other TWK channels to regulate locomotion and egg-laying. UNC-58 is expressed in motor neurons and interneurons. [Source: WormBase] BY ORTHOLOGY TO:T06H11.1a
15.4186 -14.69 0.00419338 1300 2 1 3 [+] picture button
ENSCBRT00000013822 T01D3.1 [Source:RefSeq_peptide;Acc:NP_506388]T01D3.1 [Source:RefSeq_peptide;Acc:NP_506388] BY ORTHOLOGY TO:T01D3.1
15.6406 -19.08 0.00421092 1300 4 1 4 [+] picture button
CBG08648 ENSCBRT00000002959 K11D12.5 [Source:RefSeq_peptide;Acc:NP_504349]K11D12.5 [Source:RefSeq_peptide;Acc:NP_504349] BY ORTHOLOGY TO:K11D12.5
15.3659 -15.21 0.0042369 1300 3 1 3 [+] picture button
CBG06024 ENSCBRT00000008575 Nuclear hormone receptor family member nhr-67. [Source:Uniprot/SWISSPROT;Acc:Q9XVV3]Nuclear hormone receptor family member nhr-67. [Source:Uniprot/SWISSPROT;Acc:Q9XVV3] BY ORTHOLOGY TO:C08F8.8
15.3455 -18.85 0.0047981 1300 2 2 3 [+] picture button
CBG07019 ENSCBRT00000012393 B0432.10 [Source:RefSeq_peptide;Acc:NP_493693]B0432.10 [Source:RefSeq_peptide;Acc:NP_493693] BY ORTHOLOGY TO:B0432.10
15.2704 -13.91 0.00577531 1300 4 1 5 [+] picture button
CBG03399 ENSCBRT00000007164 Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2). [Source:Uniprot/SWISSPROT;Acc:P28192]Tyrosine-protein phosphatase 2 (EC 3.1.3.48) (Protein-tyrosine phosphatase 2). [Source:Uniprot/SWISSPROT;Acc:P28192] BY ORTHOLOGY TO:K04D7.4
15.5422 -15.27 0.00646444 1300 3 2 4 [+] picture button
CBG07414 ENSCBRT00000011079 F54B11.2 [Source:RefSeq_peptide;Acc:NP_510274]F54B11.2 [Source:RefSeq_peptide;Acc:NP_510274] BY ORTHOLOGY TO:F54B11.2
15.2292 -15.25 0.00678967 1300 2 2 4 [+] picture button
CBG19201 ENSCBRT00000013356 F21C10.3a [Source:RefSeq_peptide;Acc:NP_741583]F21C10.3a [Source:RefSeq_peptide;Acc:NP_741583] BY ORTHOLOGY TO:F21C10.3a
15.1453 -10.35 0.00696615 1300 6 1 6 [+] picture button
CBG08163 ENSCBRT00000003762 The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase]The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] BY ORTHOLOGY TO:F52D1.3
15.1147 -11.64 0.00715455 1300 2 1 3 [+] picture button
CBG12369 ENSCBRT00000013118 kuzbaniankuzbanian BY ORTHOLOGY TO:AAEL002663-RA
15.2041 -15.66 0.00721219 1300 4 2 8 [+] picture button
CBG10136 ENSCBRT00000007432 fozi-1 encodes an unusual zinc-finger protein required for the fully asymmetrical phenotypic distinction of ASER cells from ASEL cells. fozi-1 otherwise has no obvious mutant phenotypes. fozi-1 mutant animals variably express flp-4, gcy-6, gcy-7 and lim-6, genes normally restricted to ASEL, in ASER as well, but with continued expression of ASER-specific genes. variable misexpression is observed even for probable null fozi-1 alleles. ectopic FOZI-1 expression in ASEL can suppress lim-6 expression. FOZI-1 has two C2H2 zinc-finger domains that probably mediate transcriptional regulation, along witha glutamine/asparagine-rich domain, and a vestigial formin homology 2 (FH2) domain that has lost its ability to polymerize actin but retained its ability to dimerize. fozi-1 genetically interacts with several regulatory proteins and miRNAs. [Source: WormBase]fozi-1 encodes an unusual zinc-finger protein required for the fully asymmetrical phenotypic distinction of ASER cells from ASEL cells. fozi-1 otherwise has no obvious mutant phenotypes. fozi-1 mutant animals variably express flp-4, gcy-6, gcy-7 and lim-6, genes normally restricted to ASEL, in ASER as well, but with continued expression of ASER-specific genes. variable misexpression is observed even for probable null fozi-1 alleles. ectopic FOZI-1 expression in ASEL can suppress lim-6 expression. FOZI-1 has two C2H2 zinc-finger domains that probably mediate transcriptional regulation, along witha glutamine/asparagine-rich domain, and a vestigial formin homology 2 (FH2) domain that has lost its ability to polymerize actin but retained its ability to dimerize. fozi-1 genetically interacts with several regulatory proteins and miRNAs. [Source: WormBase] BY ORTHOLOGY TO:K01B6.1
15.2354 -13.52 0.00738248 1300 2 1 4 [+] picture button
CBG11300 ENSCBRT00000014402 F21F8.11 [Source:RefSeq_peptide;Acc:NP_505139]F21F8.11 [Source:RefSeq_peptide;Acc:NP_505139] BY ORTHOLOGY TO:F21F8.11
17.3046 -20.04 0.00775255 1300 2 1 3 [+] picture button
CBG05808 ENSCBRT00000009078 K+/Cl- Cotransporter family member (kcc-1) [Source:RefSeq_peptide;Acc:NP_501141]K+/Cl- Cotransporter family member (kcc-1) [Source:RefSeq_peptide;Acc:NP_501141] BY ORTHOLOGY TO:R13A1.2
16.1496 -17.93 0.00795279 1300 3 2 4 [+] picture button
CBG21881 ENSCBRT00000006542 R119.7 [Source:RefSeq_peptide;Acc:NP_490724]R119.7 [Source:RefSeq_peptide;Acc:NP_490724] BY ORTHOLOGY TO:R119.7
15.0782 -11.61 0.00800651 1300 4 1 6 [+] picture button
CBG23310 ENSCBRT00000012356 F35B12.9 [Source:RefSeq_peptide;Acc:NP_505940]F35B12.9 [Source:RefSeq_peptide;Acc:NP_505940] BY ORTHOLOGY TO:F35B12.9
15.3808 -15.93 0.00807649 1300 1 2 1 [+] picture button
CBG19023 ENSCBRT00000014074 T15B7.12 [Source:RefSeq_peptide;Acc:NP_504730]T15B7.12 [Source:RefSeq_peptide;Acc:NP_504730] BY ORTHOLOGY TO:T15B7.12
15.0504 -21.73 0.0081642 1300 6 1 6 [+] picture button
ENSCBRT00000011701 F11C1.2 [Source:RefSeq_peptide;Acc:NP_510158]F11C1.2 [Source:RefSeq_peptide;Acc:NP_510158] BY ORTHOLOGY TO:F11C1.2
15.0504 -14.06 0.00856632 1300 4 1 3 [+] picture button
CBG22082 ENSCBRT00000004325 Y34D9A.2 [Source:RefSeq_peptide;Acc:NP_490815]Y34D9A.2 [Source:RefSeq_peptide;Acc:NP_490815] BY ORTHOLOGY TO:Y34D9A.2
15.0266 -17.81 0.00857027 1300 2 1 4 [+] picture button
CBG19242 ENSCBRT00000013446 Nuclear Hormone Receptor family member (nhr-36) [Source:RefSeq_peptide;Acc:NP_505398]Nuclear Hormone Receptor family member (nhr-36) [Source:RefSeq_peptide;Acc:NP_505398] BY ORTHOLOGY TO:F07C3.10
15.6501 -19.5 0.00860488 1300 4 2 5 [+] picture button
CBG14317 ENSCBRT00000002753 C16B8.2 [Source:RefSeq_peptide;Acc:NP_508685]C16B8.2 [Source:RefSeq_peptide;Acc:NP_508685] BY ORTHOLOGY TO:C16B8.2
15.3455 -13.56 0.00894259 1300 5 2 5 [+] picture button
CBG07956 ENSCBRT00000004734 SR protein related family member (rsr-1) [Source:RefSeq_peptide;Acc:NP_492875]SR protein related family member (rsr-1) [Source:RefSeq_peptide;Acc:NP_492875] BY ORTHOLOGY TO:F28D9.1
17.1742 -20.33 0.00897009 1300 4 1 3 [+] picture button
CBG21460 ENSCBRT00000002723 chaperoninchaperonin BY ORTHOLOGY TO:AAEL010063-RA
15.1303 -14.52 0.00949616 1300 3 1 4 [+] picture button
CBG22418 ENSCBRT00000004926 Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467]Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467] BY ORTHOLOGY TO:ENSMMUT00000019170
16.8401 -15.43 0.0130256 1300 8 1 15 [+] picture button
CBG15914 ENSCBRT00000011074 Zinc metalloproteinase nas-24 precursor (EC 3.4.24.21) (Nematode astacin 24). [Source:Uniprot/SWISSPROT;Acc:Q93542]Zinc metalloproteinase nas-24 precursor (EC 3.4.24.21) (Nematode astacin 24). [Source:Uniprot/SWISSPROT;Acc:Q93542] BY ORTHOLOGY TO:F20G2.4
16.7328 -20.89 0.0146775 1300 3 1 4 [+] picture button
CBG12004 ENSCBRT00000011730 ptr-2 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins. PTR-2 is required for cytokinesis in somatic cells, but not in the germline (the converse of PTC-1's function). PTR-2 is partially required for normal molting from L4 to adult stages. PTR-2 is also required for normal male tail development, growth to full size, locomotion, and viability. [Source: WormBase]ptr-2 encodes an ortholog of Drosophila and human PTCHD3, which defines one of seven paralogous families of sterol sensing domain (SSD) proteins. PTR-2 is required for cytokinesis in somatic cells, but not in the germline (the converse of PTC-1's function). PTR-2 is partially required for normal molting from L4 to adult stages. PTR-2 is also required for normal male tail development, growth to full size, locomotion, and viability. [Source: WormBase] BY ORTHOLOGY TO:C32E8.8
16.7046 -20.52 0.0151455 1300 3 2 5 [+] picture button
CBG13848 ENSCBRT00000012455 M88.3 [Source:RefSeq_peptide;Acc:NP_497921]M88.3 [Source:RefSeq_peptide;Acc:NP_497921] BY ORTHOLOGY TO:M88.3
16.6633 -16.01 0.0158564 1300 4 1 6 [+] picture button
CBG11259 ENSCBRT00000014511 F52E1.9 [Source:RefSeq_peptide;Acc:NP_505169]F52E1.9 [Source:RefSeq_peptide;Acc:NP_505169] BY ORTHOLOGY TO:F52E1.9
16.6471 -19.86 0.016144 1300 4 1 5 [+] picture button
CBG18274 ENSCBRT00000001666 M142.5 [Source:RefSeq_peptide;Acc:NP_499402]M142.5 [Source:RefSeq_peptide;Acc:NP_499402] BY ORTHOLOGY TO:M142.5
16.6446 -19.03 0.0161898 1300 9 1 13 [+] picture button
CBG20515 ENSCBRT00000004679 Y60A3A.8 [Source:RefSeq_peptide;Acc:NP_507862]Y60A3A.8 [Source:RefSeq_peptide;Acc:NP_507862] BY ORTHOLOGY TO:Y60A3A.8
16.5328 -16.89 0.018326 1300 2 1 4 [+] picture button
CBG02748 ENSCBRT00000007338 ZK930.2 [Source:RefSeq_peptide;Acc:NP_496539]ZK930.2 [Source:RefSeq_peptide;Acc:NP_496539] BY ORTHOLOGY TO:ZK930.2
16.5259 -19.2 0.0184667 1300 10 1 17 [+] picture button
CBG05011 ENSCBRT00000010223 C14F11.1b [Source:RefSeq_peptide;Acc:NP_741811]C14F11.1b [Source:RefSeq_peptide;Acc:NP_741811] BY ORTHOLOGY TO:C14F11.1a
16.459 -18.41 0.0198867 1300 2 1 6 [+] picture button
CBG13959 ENSCBRT00000013618 C50A2.3 [Source:RefSeq_peptide;Acc:NP_500045]C50A2.3 [Source:RefSeq_peptide;Acc:NP_500045] BY ORTHOLOGY TO:C50A2.3
16.436 -17.82 0.020398 1300 2 1 4 [+] picture button

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