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Target Listing


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Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cel-miR-261

92 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG15379 ENSCBRT00000010130 F32B4.2 [Source:RefSeq_peptide;Acc:NP_492941]F32B4.2 [Source:RefSeq_peptide;Acc:NP_492941] BY ORTHOLOGY TO:F32B4.2
17.0886 -16.3 0.000001 1300 4 1 1 [+] picture button
CBG20390 ENSCBRT00000003650 Soluble guanylate cyclase gcy-35 (EC 4.6.1.2). [Source:Uniprot/SWISSPROT;Acc:O02298]Soluble guanylate cyclase gcy-35 (EC 4.6.1.2). [Source:Uniprot/SWISSPROT;Acc:O02298] BY ORTHOLOGY TO:T04D3.4
17.6306 -14 0.00181376 1300 4 1 3 [+] picture button
CBG14610 ENSCBRT00000003225 C42D8.1 [Source:RefSeq_peptide;Acc:NP_508869]C42D8.1 [Source:RefSeq_peptide;Acc:NP_508869] BY ORTHOLOGY TO:C42D8.1
16.5623 -13.81 0.00215478 1300 8 1 6 [+] picture button
CBG18015 ENSCBRT00000003052 Serpentine receptor class gamma-11 (Protein srg-11). [Source:Uniprot/SWISSPROT;Acc:P46569]Serpentine receptor class gamma-11 (Protein srg-11). [Source:Uniprot/SWISSPROT;Acc:P46569] BY ORTHOLOGY TO:T04A8.2
16.4864 -14.37 0.00227908 1300 6 1 5 [+] picture button
CBG03647 ENSCBRT00000006544 C06A5.2 [Source:RefSeq_peptide;Acc:NP_491736]C06A5.2 [Source:RefSeq_peptide;Acc:NP_491736] BY ORTHOLOGY TO:C06A5.2
16.5771 -14.24 0.00238125 1300 5 1 3 [+] picture button
CBG03820 ENSCBRT00000008669 sys-1 encodes a novel protein that contains three divergent armadillo repeats. during gonadogenesis, SYS-1 functions in a Wnt/MAPK signaling pathway as a dosage-dependent beta-catenin-like transcriptional coactivator required for specification of distal cell fates. consistent with its role as a beta-catenin, SYS-1 interacts, in yeast two-hybrid and coimmunoprecipitation assays, with the POP-1/TCF transcription factor with which it can stimulate transcription via TCF binding sites. in two hybrid-assays, the POP-1/SYS-1 interaction requires the N-terminal beta-catenin binding domain of POP-1, and most of the SYS-1 protein. the SYS-1 expression pattern is not yet known. [Source: WormBase]sys-1 encodes a novel protein that contains three divergent armadillo repeats. during gonadogenesis, SYS-1 functions in a Wnt/MAPK signaling pathway as a dosage-dependent beta-catenin-like transcriptional coactivator required for specification of distal cell fates. consistent with its role as a beta-catenin, SYS-1 interacts, in yeast two-hybrid and coimmunoprecipitation assays, with the POP-1/TCF transcription factor with which it can stimulate transcription via TCF binding sites. in two hybrid-assays, the POP-1/SYS-1 interaction requires the N-terminal beta-catenin binding domain of POP-1, and most of the SYS-1 protein. the SYS-1 expression pattern is not yet known. [Source: WormBase] BY ORTHOLOGY TO:T23D8.9a
16.4436 -17.15 0.00250331 1300 6 1 7 [+] picture button
CBG05161 ENSCBRT00000010316 T06A4.1b [Source:RefSeq_peptide;Acc:NP_871809]T06A4.1b [Source:RefSeq_peptide;Acc:NP_871809] BY ORTHOLOGY TO:T06A4.1b
16.0684 -11.99 0.00297694 1300 3 1 2 [+] picture button
ENSCBRT00000007640 T02E1.4 [Source:RefSeq_peptide;Acc:NP_492240]T02E1.4 [Source:RefSeq_peptide;Acc:NP_492240] BY ORTHOLOGY TO:T02E1.4
16.3726 -18.72 0.00329303 1300 4 1 4 [+] picture button
CBG16892 ENSCBRT00000012776 C18A11.2 [Source:RefSeq_peptide;Acc:NP_509357]C18A11.2 [Source:RefSeq_peptide;Acc:NP_509357] BY ORTHOLOGY TO:C18A11.2
16.3131 -14.94 0.0036552 1300 1 1 1 [+] picture button
CBG09852 ENSCBRT00000007994 Y54F10AM.6 [Source:RefSeq_peptide;Acc:NP_497571]Y54F10AM.6 [Source:RefSeq_peptide;Acc:NP_497571] BY ORTHOLOGY TO:Y54F10AM.6
16.3131 -13.52 0.00371919 1300 6 1 6 [+] picture button
CBG14128 ENSCBRT00000002568 TWiK family of potassium channels family member (twk-16) [Source:RefSeq_peptide;Acc:NP_508526]TWiK family of potassium channels family member (twk-16) [Source:RefSeq_peptide;Acc:NP_508526] BY ORTHOLOGY TO:F52E4.4
16.0263 -16.48 0.00406084 1300 2 1 1 [+] picture button
CBG05365 ENSCBRT00000004671 C17H12.10 [Source:RefSeq_peptide;Acc:NP_501045]C17H12.10 [Source:RefSeq_peptide;Acc:NP_501045] BY ORTHOLOGY TO:C17H12.10
16.347 -14.45 0.0046379 1300 1 2 1 [+] picture button
CBG01897 ENSCBRT00000005744 F36G3.2 [Source:RefSeq_peptide;Acc:NP_509643]F36G3.2 [Source:RefSeq_peptide;Acc:NP_509643] BY ORTHOLOGY TO:F36G3.2
16.5637 -13.26 0.00464143 1300 3 1 3 [+] picture button
CBG24092 ENSCBRT00000014671 F10E9.12 [Source:RefSeq_peptide;Acc:NP_498832]F10E9.12 [Source:RefSeq_peptide;Acc:NP_498832] BY ORTHOLOGY TO:F10E9.12
16.1923 -21.86 0.00484046 1300 4 1 4 [+] picture button
CBG03470 ENSCBRT00000007216 Nucleoporin p54 (54 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q7Z3B4]Nucleoporin p54 (54 kDa nucleoporin). [Source:Uniprot/SWISSPROT;Acc:Q7Z3B4] BY ORTHOLOGY TO:ENSGALT00000018760
16.1351 -13.36 0.00501096 1300 1 1 2 [+] picture button
ENSCBRT00000002789 The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase]The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). [Source: WormBase] BY ORTHOLOGY TO:C24A8.3
17.1041 -16.69 0.00505404 1300 7 1 8 [+] picture button
CBG13530 ENSCBRT00000009346 Major facilitator superfamily domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q6N075]Major facilitator superfamily domain-containing protein 5. [Source:Uniprot/SWISSPROT;Acc:Q6N075] BY ORTHOLOGY TO:ENSORLT00000009812
16.0648 -13.34 0.00584691 1300 2 1 3 [+] picture button
CBG24747 ENSCBRT00000008972 T06A1.1 [Source:RefSeq_peptide;Acc:NP_503533]T06A1.1 [Source:RefSeq_peptide;Acc:NP_503533] BY ORTHOLOGY TO:T06A1.1
15.957 -7.89 0.00738921 1300 9 1 13 [+] picture button
CBG01611 ENSCBRT00000005506 F56A11.5 [Source:RefSeq_peptide;Acc:NP_499948]F56A11.5 [Source:RefSeq_peptide;Acc:NP_499948] BY ORTHOLOGY TO:F56A11.5
15.9177 -12.72 0.00804428 1300 1 1 1 [+] picture button
CBG01438 ENSCBRT00000002522 PREDICTED: Bos taurus hypothetical LOC540837 (LOC540837), mRNA. [Source:RefSeq_dna;Acc:XR_027922]PREDICTED: Bos taurus hypothetical LOC540837 (LOC540837), mRNA. [Source:RefSeq_dna;Acc:XR_027922] BY ORTHOLOGY TO:ENSBTAT00000012249
15.9227 -14.11 0.00825925 1300 8 1 6 [+] picture button
CBG11184 ENSCBRT00000014436 Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (Cyclophilin J) (CyPJ). [Source:Uniprot/SWISSPROT;Acc:Q9H2H8]Peptidyl-prolyl cis-trans isomerase-like 3 (EC 5.2.1.8) (PPIase) (Rotamase) (Cyclophilin-like protein PPIL3) (Cyclophilin J) (CyPJ). [Source:Uniprot/SWISSPROT;Acc:Q9H2H8] BY ORTHOLOGY TO:ENSOANT00000012822
16.0637 -9.27 0.00889418 1300 4 2 4 [+] picture button
CBG12241 ENSCBRT00000013309 ZK652.6a [Source:RefSeq_peptide;Acc:NP_001023028]ZK652.6a [Source:RefSeq_peptide;Acc:NP_001023028] BY ORTHOLOGY TO:ZK652.6b
17.9048 -18.12 0.00926915 1300 4 1 4 [+] picture button
CBG04025 ENSCBRT00000009921 TYRosinase family member (tyr-4) [Source:RefSeq_peptide;Acc:NP_491709]TYRosinase family member (tyr-4) [Source:RefSeq_peptide;Acc:NP_491709] BY ORTHOLOGY TO:C34G6.2
16.0776 -13.71 0.00934124 1300 4 1 5 [+] picture button
CBG08408 ENSCBRT00000012906 Y38C1BA.3 [Source:RefSeq_peptide;Acc:NP_500138]Y38C1BA.3 [Source:RefSeq_peptide;Acc:NP_500138] BY ORTHOLOGY TO:Y38C1BA.3
15.9177 -12.64 0.00941842 1300 3 2 3 [+] picture button
CBG18864 ENSCBRT00000012667 Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5]Transmembrane protein 41A precursor. [Source:Uniprot/SWISSPROT;Acc:Q96HV5] BY ORTHOLOGY TO:ENST00000296254
16.372 -12.31 0.0111319 1300 8 1 10 [+] picture button
CBG00686 ENSCBRT00000003176 F14F11.1h [Source:RefSeq_peptide;Acc:NP_001022089]F14F11.1h [Source:RefSeq_peptide;Acc:NP_001022089] BY ORTHOLOGY TO:F14F11.1h
17.6955 -19.16 0.0118479 1300 4 1 4 [+] picture button
CBG21118 ENSCBRT00000000846 Y42G9A.1 [Source:RefSeq_peptide;Acc:NP_498333]Y42G9A.1 [Source:RefSeq_peptide;Acc:NP_498333] BY ORTHOLOGY TO:Y42G9A.1
17.54 -18.12 0.0142125 1300 3 1 2 [+] picture button
ENSCBRT00000004836 Y46G5A.10 [Source:RefSeq_peptide;Acc:NP_496715]Y46G5A.10 [Source:RefSeq_peptide;Acc:NP_496715] BY ORTHOLOGY TO:Y46G5A.10
17.4684 -20.66 0.0154525 1300 9 1 5 [+] picture button
CBG05672 ENSCBRT00000005334 B0399.1b [Source:RefSeq_peptide;Acc:NP_872182]B0399.1b [Source:RefSeq_peptide;Acc:NP_872182] BY ORTHOLOGY TO:B0399.1b
17.404 -16.79 0.0166571 1300 3 1 4 [+] picture button
CBG16197 ENSCBRT00000012603 Tetraspanin-12 (Tspan-12) (Transmembrane 4 superfamily member 12) (Tetraspan NET-2). [Source:Uniprot/SWISSPROT;Acc:O95859]Tetraspanin-12 (Tspan-12) (Transmembrane 4 superfamily member 12) (Tetraspan NET-2). [Source:Uniprot/SWISSPROT;Acc:O95859] BY ORTHOLOGY TO:ENSOANT00000019580
17.326 -13.03 0.0182431 1300 7 1 12 [+] picture button
CBG00271 ENSCBRT00000000238 Y102F5A.1 [Source:RefSeq_peptide;Acc:NP_509972]Y102F5A.1 [Source:RefSeq_peptide;Acc:NP_509972] BY ORTHOLOGY TO:Y102F5A.1
17.3018 -18.19 0.0187632 1300 2 1 5 [+] picture button
CBG12306 ENSCBRT00000013342 R10E4.7 [Source:RefSeq_peptide;Acc:NP_497861]R10E4.7 [Source:RefSeq_peptide;Acc:NP_497861] BY ORTHOLOGY TO:R10E4.7
17.2997 -12.3 0.0188085 1300 6 1 5 [+] picture button
CBG03659 ENSCBRT00000008751 Ankyrin repeat domain-containing protein 13C. [Source:Uniprot/SWISSPROT;Acc:Q8N6S4]Ankyrin repeat domain-containing protein 13C. [Source:Uniprot/SWISSPROT;Acc:Q8N6S4] BY ORTHOLOGY TO:ENSOANT00000024469
17.276 -20.06 0.0193345 1300 4 1 10 [+] picture button
CBG03839 ENSCBRT00000008683 2 (Zwei) IG-domain protein family member (zig-1) [Source:RefSeq_peptide;Acc:NP_492608]2 (Zwei) IG-domain protein family member (zig-1) [Source:RefSeq_peptide;Acc:NP_492608] BY ORTHOLOGY TO:K10C3.3
17.274 -14.94 0.0193794 1300 4 1 5 [+] picture button
ENSCBRT00000013308 The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase]The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase] BY ORTHOLOGY TO:ZK652.5
17.229 -9.07 0.0204203 1300 7 1 10 [+] picture button
CBG03177 ENSCBRT00000006894 F07H5.8 [Source:RefSeq_peptide;Acc:NP_495874]F07H5.8 [Source:RefSeq_peptide;Acc:NP_495874] BY ORTHOLOGY TO:F07H5.8
17.2029 -14.61 0.0210472 1300 3 2 3 [+] picture button
CBG04746 ENSCBRT00000010572 T13H5.6 [Source:RefSeq_peptide;Acc:NP_495801]T13H5.6 [Source:RefSeq_peptide;Acc:NP_495801] BY ORTHOLOGY TO:T13H5.6
17.1666 -13.38 0.0219541 1300 2 2 3 [+] picture button
CBG00031 ENSCBRT00000000220 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL005457-RA
17.0897 -13.68 0.0239976 1300 6 1 6 [+] picture button
CBG20495 ENSCBRT00000003902 Importin beta-1 subunit (Karyopherin beta-1 subunit) (Nuclear factor P97) (Importin 90). [Source:Uniprot/SWISSPROT;Acc:Q14974]Importin beta-1 subunit (Karyopherin beta-1 subunit) (Nuclear factor P97) (Importin 90). [Source:Uniprot/SWISSPROT;Acc:Q14974] BY ORTHOLOGY TO:ENSORLT00000024758
17.0872 -10.69 0.0240673 1300 2 1 2 [+] picture button
ENSCBRT00000012868 Y38F2AR.5 [Source:RefSeq_peptide;Acc:NP_500194]Y38F2AR.5 [Source:RefSeq_peptide;Acc:NP_500194] BY ORTHOLOGY TO:Y38F2AR.5
17.0566 -24.34 0.0249354 1300 3 1 3 [+] picture button
CBG10926 ENSCBRT00000001255 F14B8.4 [Source:RefSeq_peptide;Acc:NP_509166]F14B8.4 [Source:RefSeq_peptide;Acc:NP_509166] BY ORTHOLOGY TO:F14B8.4
16.9802 -18.13 0.0272318 1300 2 2 5 [+] picture button
CBG11570 ENSCBRT00000011376 citrate lyase beta like [Source:RefSeq_peptide;Acc:NP_996531]citrate lyase beta like [Source:RefSeq_peptide;Acc:NP_996531] BY ORTHOLOGY TO:ENSORLT00000013987
16.9179 -15.19 0.0292577 1300 2 1 2 [+] picture button
CBG19058 ENSCBRT00000013982 Nuclear Hormone Receptor family member (nhr-94) [Source:RefSeq_peptide;Acc:NP_504989]Nuclear Hormone Receptor family member (nhr-94) [Source:RefSeq_peptide;Acc:NP_504989] BY ORTHOLOGY TO:C12D5.8a
16.9027 -17.94 0.0297762 1300 5 1 7 [+] picture button
CBG20336 ENSCBRT00000003697 R05D7.5 [Source:RefSeq_peptide;Acc:NP_493078]R05D7.5 [Source:RefSeq_peptide;Acc:NP_493078] BY ORTHOLOGY TO:R05D7.5
16.8804 -17.19 0.030549 1300 8 2 12 [+] picture button
CBG01549 ENSCBRT00000005679 CG13090-PA [Source:RefSeq_peptide;Acc:NP_609240]CG13090-PA [Source:RefSeq_peptide;Acc:NP_609240] BY ORTHOLOGY TO:CG13090-RA
16.8475 -21.19 0.0317253 1300 2 1 2 [+] picture button
CBG08227 ENSCBRT00000003579 R13G10.4 encodes a predicted transmembrane protein orthologous to human ACDP1-ACDP4 and S. cerevisiae MAM3, and paralogous to C01H6.6, C33D12.2, C52D10.12, M02F4.3, and R04E5.2. by orthology with MAM3, R13G10.4 may participate in metal homoeostasis. R13G10.4, MAM3, and ACDP1-ACDP4 belong to a family of proteins (sharing an ACD domain) from bacteria, yeast, plants, and metazoa. murine Acdp1 is a plasma membrane protein. bacterial proteins containing the ACD domain include CorC from Salmonella typhimurium, which is involved in magnesium and cobalt efflux. R13G10.4 is required for normal development in mass RNAi assays. [Source: WormBase]R13G10.4 encodes a predicted transmembrane protein orthologous to human ACDP1-ACDP4 and S. cerevisiae MAM3, and paralogous to C01H6.6, C33D12.2, C52D10.12, M02F4.3, and R04E5.2. by orthology with MAM3, R13G10.4 may participate in metal homoeostasis. R13G10.4, MAM3, and ACDP1-ACDP4 belong to a family of proteins (sharing an ACD domain) from bacteria, yeast, plants, and metazoa. murine Acdp1 is a plasma membrane protein. bacterial proteins containing the ACD domain include CorC from Salmonella typhimurium, which is involved in magnesium and cobalt efflux. R13G10.4 is required for normal development in mass RNAi assays. [Source: WormBase] BY ORTHOLOGY TO:R13G10.4
16.8075 -12.65 0.0332151 1300 2 1 2 [+] picture button
CBG00681 ENSCBRT00000003197 Serpentine receptor class alpha-13 (Protein sra-13). [Source:Uniprot/SWISSPROT;Acc:Q20618]Serpentine receptor class alpha-13 (Protein sra-13). [Source:Uniprot/SWISSPROT;Acc:Q20618] BY ORTHOLOGY TO:F49E12.5a
16.8046 -11.33 0.0333253 1300 2 1 2 [+] picture button
CBG07082 ENSCBRT00000012438 C09E8.2a [Source:RefSeq_peptide;Acc:NP_493756]C09E8.2a [Source:RefSeq_peptide;Acc:NP_493756] BY ORTHOLOGY TO:C09E8.2a
16.7924 -15.55 0.0337927 1300 4 1 3 [+] picture button
CBG15150 ENSCBRT00000010344 BE0003N10.3 [Source:RefSeq_peptide;Acc:NP_497325]BE0003N10.3 [Source:RefSeq_peptide;Acc:NP_497325] BY ORTHOLOGY TO:BE0003N10.3
16.7562 -14.29 0.0352224 1300 2 1 2 [+] picture button
CBG17893 ENSCBRT00000000440 HpaII tiny fragments locus 9c [Source:RefSeq_peptide;Acc:NP_001011895]HpaII tiny fragments locus 9c [Source:RefSeq_peptide;Acc:NP_001011895] BY ORTHOLOGY TO:ENSRNOT00000002580
16.744 -15.03 0.0357173 1300 7 1 5 [+] picture button

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