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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cel-miR-243

134 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG20702 ENSCBRT00000001402 F46B3.9 [Source:RefSeq_peptide;Acc:NP_507980]F46B3.9 [Source:RefSeq_peptide;Acc:NP_507980] BY ORTHOLOGY TO:F46B3.9
15.9574 -25.26 1e-06 1300 7 1 3 [+] picture button
CBG21898 ENSCBRT00000008226 Serpentine Receptor, class D (delta) family member (srd-53) [Source:RefSeq_peptide;Acc:NP_492061]Serpentine Receptor, class D (delta) family member (srd-53) [Source:RefSeq_peptide;Acc:NP_492061] BY ORTHOLOGY TO:F13G3.2
15.485 -23.96 0.0010803 1300 6 1 7 [+] picture button
CBG04562 ENSCBRT00000010462 C47E8.3 [Source:RefSeq_peptide;Acc:NP_506624]C47E8.3 [Source:RefSeq_peptide;Acc:NP_506624] BY ORTHOLOGY TO:C47E8.3
16.0448 -19.88 0.00111865 1300 3 2 3 [+] picture button
CBG13885 ENSCBRT00000013661 C54E4.4 [Source:RefSeq_peptide;Acc:NP_500172]C54E4.4 [Source:RefSeq_peptide;Acc:NP_500172] BY ORTHOLOGY TO:C54E4.4
15.4489 -33.68 0.00127306 1300 4 1 6 [+] picture button
CBG23146 ENSCBRT00000012059 GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13]GPI inositol-deacylase (EC 3.1.-.-) (hPGAP1). [Source:Uniprot/SWISSPROT;Acc:Q75T13] BY ORTHOLOGY TO:ENSMMUT00000003107
16.4173 -24.9 0.00191894 1300 5 1 5 [+] picture button
CBG11639 ENSCBRT00000011428 Seven TM Receptor family member (str-161) [Source:RefSeq_peptide;Acc:NP_500668]Seven TM Receptor family member (str-161) [Source:RefSeq_peptide;Acc:NP_500668] BY ORTHOLOGY TO:T08B6.3
17.8732 -25.71 0.00207672 1300 4 1 4 [+] picture button
CBG01752 ENSCBRT00000005623 Apoptotic protease-activating factor 1 (Apaf-1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9GL23]Apoptotic protease-activating factor 1 (Apaf-1) (Fragment). [Source:Uniprot/SWISSPROT;Acc:Q9GL23] BY ORTHOLOGY TO:ENSCAFT00000010576
15.2023 -22.91 0.00213479 1300 4 1 3 [+] picture button
ENSCBRT00000000705 Y17G7B.1 [Source:RefSeq_peptide;Acc:NP_496552]Y17G7B.1 [Source:RefSeq_peptide;Acc:NP_496552] BY ORTHOLOGY TO:Y17G7B.1
14.7968 -10.92 0.00224114 1300 6 1 6 [+] picture button
CBG23743 ENSCBRT00000004474 Spindle-defective protein 5. [Source:Uniprot/SWISSPROT;Acc:P91349]Spindle-defective protein 5. [Source:Uniprot/SWISSPROT;Acc:P91349] BY ORTHOLOGY TO:F56A3.4
15.8166 -27.29 0.00231849 1300 2 2 3 [+] picture button
CBG05858 ENSCBRT00000009245 voltage-dependent p/q type calcium channelvoltage-dependent p/q type calcium channel BY ORTHOLOGY TO:AAEL011280-RA
15.0664 -23.28 0.00265135 1300 1 2 1 [+] picture button
CBG23230 ENSCBRT00000012196 C55A6.6 [Source:RefSeq_peptide;Acc:NP_505920]C55A6.6 [Source:RefSeq_peptide;Acc:NP_505920] BY ORTHOLOGY TO:C55A6.6
14.6821 -21.68 0.00280113 1300 3 1 2 [+] picture button
ENSCBRT00000013351 Nuclear Hormone Receptor family member (nhr-204) [Source:RefSeq_peptide;Acc:NP_503165]Nuclear Hormone Receptor family member (nhr-204) [Source:RefSeq_peptide;Acc:NP_503165] BY ORTHOLOGY TO:R02C2.4
17.5112 -33.13 0.00309966 1300 3 2 6 [+] picture button
ENSCBRT00000007427 Serpentine receptor class X 45 (Protein srx-45). [Source:Uniprot/SWISSPROT;Acc:P34490]Serpentine receptor class X 45 (Protein srx-45). [Source:Uniprot/SWISSPROT;Acc:P34490] BY ORTHOLOGY TO:K01B6.2
14.9433 -24.13 0.00313554 1300 4 2 4 [+] picture button
CBG11463 ENSCBRT00000013857 Serpentine Receptor, class X family member (srx-18) [Source:RefSeq_peptide;Acc:NP_507493]Serpentine Receptor, class X family member (srx-18) [Source:RefSeq_peptide;Acc:NP_507493] BY ORTHOLOGY TO:C47A10.8
14.9871 -25.57 0.00318479 1300 2 1 3 [+] picture button
CBG05155 ENSCBRT00000010319 PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2143057]PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:MarkerSymbol;Acc:MGI:2143057] BY ORTHOLOGY TO:ENSMUST00000046821
14.5122 -25.6 0.00325639 1300 4 1 3 [+] picture button
CBG02849 ENSCBRT00000006228 Nup170 CG6743-PA [Source:RefSeq_peptide;Acc:NP_609446]Nup170 CG6743-PA [Source:RefSeq_peptide;Acc:NP_609446] BY ORTHOLOGY TO:CG6743-RA
16.6899 -31.02 0.00361017 1300 6 2 5 [+] picture button
CBG12413 ENSCBRT00000013156 F32H2.7 [Source:RefSeq_peptide;Acc:NP_492420]F32H2.7 [Source:RefSeq_peptide;Acc:NP_492420] BY ORTHOLOGY TO:F32H2.7
14.9433 -22.19 0.00394349 1300 8 2 10 [+] picture button
CBG22256 ENSCBRT00000003646 E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-) (Nedd4-2) (NEDD4.2). [Source:Uniprot/SWISSPROT;Acc:Q96PU5]E3 ubiquitin-protein ligase NEDD4-like protein (EC 6.3.2.-) (Nedd4-2) (NEDD4.2). [Source:Uniprot/SWISSPROT;Acc:Q96PU5] BY ORTHOLOGY TO:ENSMODT00000026021
14.9971 -21.55 0.00402632 1300 5 1 4 [+] picture button
CBG19040 ENSCBRT00000014059 odc-1 encodes ornithine decarboxylase, the first enzyme of polyamine biosynthesis that catalyzes the conversion of ornithine to putrescine. ODC-1 is required for development when animals are deprived of exogenous polyamines, which are required for oogenesis and completion of embryogenesis. in addition,ODC-1 may contribute to male fertility. ODC-1 activity is detectable at all developmental stages, with highest levels observed in adults and L4 larvae. [Source: WormBase]odc-1 encodes ornithine decarboxylase, the first enzyme of polyamine biosynthesis that catalyzes the conversion of ornithine to putrescine. ODC-1 is required for development when animals are deprived of exogenous polyamines, which are required for oogenesis and completion of embryogenesis. in addition,ODC-1 may contribute to male fertility. ODC-1 activity is detectable at all developmental stages, with highest levels observed in adults and L4 larvae. [Source: WormBase] BY ORTHOLOGY TO:K11C4.4
14.9934 -16.2 0.00408934 1300 1 1 1 [+] picture button
ENSCBRT00000014469 F41G3.12 [Source:RefSeq_peptide;Acc:NP_001022152]F41G3.12 [Source:RefSeq_peptide;Acc:NP_001022152] BY ORTHOLOGY TO:F41G3.12
14.7492 -19.93 0.00408934 1300 7 1 11 [+] picture button
CBG19961 ENSCBRT00000002463 Y4C6B.1 [Source:RefSeq_peptide;Acc:NP_500786]Y4C6B.1 [Source:RefSeq_peptide;Acc:NP_500786] BY ORTHOLOGY TO:Y4C6B.1
14.5646 -25.99 0.00439255 1300 6 1 5 [+] picture button
CBG16757 ENSCBRT00000012837 F27D9.7 [Source:RefSeq_peptide;Acc:NP_509295]F27D9.7 [Source:RefSeq_peptide;Acc:NP_509295] BY ORTHOLOGY TO:F27D9.7
14.9516 -12.84 0.00440311 1300 3 1 2 [+] picture button
CBG15262 ENSCBRT00000010440 T19C3.1 [Source:RefSeq_peptide;Acc:NP_497218]T19C3.1 [Source:RefSeq_peptide;Acc:NP_497218] BY ORTHOLOGY TO:T19C3.1
15.1374 -23.3 0.00444029 1300 7 1 6 [+] picture button
CBG06187 ENSCBRT00000008301 nhr-43 is predicted to encode a nuclear hormone receptor (NHR). the primary sequence of nhr-43 reveals that it has a leucine instead of a methionine that is conserved within the NHR superfamily at the carboxyl boundary of the DNA-binding domain. [Source: WormBase]nhr-43 is predicted to encode a nuclear hormone receptor (NHR). the primary sequence of nhr-43 reveals that it has a leucine instead of a methionine that is conserved within the NHR superfamily at the carboxyl boundary of the DNA-binding domain. [Source: WormBase] BY ORTHOLOGY TO:C29E6.5
14.5961 -11.42 0.00553475 1300 2 1 2 [+] picture button
CBG08704 ENSCBRT00000002896 Y49G5B.1 [Source:RefSeq_peptide;Acc:NP_504396]Y49G5B.1 [Source:RefSeq_peptide;Acc:NP_504396] BY ORTHOLOGY TO:Y49G5B.1
14.5552 -14.27 0.00612437 1300 4 1 4 [+] picture button
CBG00906 ENSCBRT00000003944 NFX1-type zinc finger-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9P2E3]NFX1-type zinc finger-containing protein 1. [Source:Uniprot/SWISSPROT;Acc:Q9P2E3] BY ORTHOLOGY TO:ENSORLT00000007663
14.429 -15.13 0.00750312 1300 5 2 6 [+] picture button
CBG09206 ENSCBRT00000001809 tag-125/C14B1.4 encodes an ortholog of the histone methyltransferase subunit WDR5 (OMIM:609012) that antagonizes SynMuv transcriptional repressors. [Source: WormBase]tag-125/C14B1.4 encodes an ortholog of the histone methyltransferase subunit WDR5 (OMIM:609012) that antagonizes SynMuv transcriptional repressors. [Source: WormBase] BY ORTHOLOGY TO:C14B1.4
16.6899 -24.79 0.00767349 1300 4 1 4 [+] picture button
CBG21943 ENSCBRT00000008178 K10D3.4 [Source:RefSeq_peptide;Acc:NP_492020]K10D3.4 [Source:RefSeq_peptide;Acc:NP_492020] BY ORTHOLOGY TO:K10D3.4
14.5213 -27.02 0.0077274 1300 1 1 1 [+] picture button
CBG17652 ENSCBRT00000002201 R102.4b [Source:RefSeq_peptide;Acc:NP_501979]R102.4b [Source:RefSeq_peptide;Acc:NP_501979] BY ORTHOLOGY TO:R102.4a
14.437 -19.69 0.00855684 1300 4 1 3 [+] picture button
CBG09649 ENSCBRT00000005796 Serpentine Receptor, class G (gamma) family member (srg-32) [Source:RefSeq_peptide;Acc:NP_505716]Serpentine Receptor, class G (gamma) family member (srg-32) [Source:RefSeq_peptide;Acc:NP_505716] BY ORTHOLOGY TO:T21C9.7
14.3611 -17.28 0.0086016 1300 2 1 5 [+] picture button
CBG18097 ENSCBRT00000003255 androgen induced inhibitor of proliferation (as3) / pds5androgen induced inhibitor of proliferation (as3) / pds5 BY ORTHOLOGY TO:AAEL014212-RA
14.456 -20.08 0.00862681 1300 4 1 5 [+] picture button
CBG09830 ENSCBRT00000008014 H19M22.3a [Source:RefSeq_peptide;Acc:NP_497594]H19M22.3a [Source:RefSeq_peptide;Acc:NP_497594] BY ORTHOLOGY TO:H19M22.3c
16.5822 -28.86 0.00863943 1300 2 1 3 [+] picture button
CBG08618 ENSCBRT00000002973 F26D11.2 [Source:RefSeq_peptide;Acc:NP_505049]F26D11.2 [Source:RefSeq_peptide;Acc:NP_505049] BY ORTHOLOGY TO:F26D11.2
16.571 -24.86 0.00874626 1300 2 1 2 [+] picture button
CBG23024 ENSCBRT00000008849 C45G9.9 [Source:RefSeq_peptide;Acc:NP_498074]C45G9.9 [Source:RefSeq_peptide;Acc:NP_498074] BY ORTHOLOGY TO:C45G9.9
14.3495 -14.73 0.00880469 1300 6 1 9 [+] picture button
CBG09702 ENSCBRT00000005730 D1054.5 [Source:RefSeq_peptide;Acc:NP_505752]D1054.5 [Source:RefSeq_peptide;Acc:NP_505752] BY ORTHOLOGY TO:D1054.5
16.5058 -22.64 0.00939657 1300 4 1 4 [+] picture button
CBG09258 ENSCBRT00000006276 Y38A10A.2 [Source:RefSeq_peptide;Acc:NP_504570]Y38A10A.2 [Source:RefSeq_peptide;Acc:NP_504570] BY ORTHOLOGY TO:Y38A10A.2
16.4783 -28.63 0.00968474 1300 5 2 5 [+] picture button
CBG06685 ENSCBRT00000009699 Putative selenium-binding protein. [Source:Uniprot/SWISSPROT;Acc:Q21950]Putative selenium-binding protein. [Source:Uniprot/SWISSPROT;Acc:Q21950] BY ORTHOLOGY TO:R11G10.2
15.4285 -24.37 0.00978172 1300 2 1 3 [+] picture button
CBG13058 ENSCBRT00000013026 D1022.4 [Source:RefSeq_peptide;Acc:NP_495561]D1022.4 [Source:RefSeq_peptide;Acc:NP_495561] BY ORTHOLOGY TO:D1022.4
16.421 -20.56 0.0103128 1300 2 1 2 [+] picture button
CBG14498 ENSCBRT00000003503 C05E11.7 [Source:RefSeq_peptide;Acc:NP_508786]C05E11.7 [Source:RefSeq_peptide;Acc:NP_508786] BY ORTHOLOGY TO:C05E11.7
15.6226 -24.62 0.0105635 1300 4 2 6 [+] picture button
CBG23536 ENSCBRT00000011619 C14C10.7 [Source:RefSeq_peptide;Acc:NP_506149]C14C10.7 [Source:RefSeq_peptide;Acc:NP_506149] BY ORTHOLOGY TO:C14C10.7
14.3611 -30.01 0.0109705 1300 3 2 3 [+] picture button
CBG09704 ENSCBRT00000005723 D1054.8 [Source:RefSeq_peptide;Acc:NP_505755]D1054.8 [Source:RefSeq_peptide;Acc:NP_505755] BY ORTHOLOGY TO:D1054.8
16.2243 -25.68 0.0127963 1300 4 1 4 [+] picture button
CBG05362 ENSCBRT00000002812 W02C12.1 [Source:RefSeq_peptide;Acc:NP_500460]W02C12.1 [Source:RefSeq_peptide;Acc:NP_500460] BY ORTHOLOGY TO:W02C12.1
16.2141 -21.41 0.012939 1300 5 1 5 [+] picture button
CBG18893 ENSCBRT00000014180 hypothetical protein LOC505403 [Source:RefSeq_peptide;Acc:NP_001030194]hypothetical protein LOC505403 [Source:RefSeq_peptide;Acc:NP_001030194] BY ORTHOLOGY TO:ENSBTAT00000023026
16.1288 -23.89 0.0142046 1300 3 1 3 [+] picture button
CBG15311 ENSCBRT00000009583 Y76A2B.3 [Source:RefSeq_peptide;Acc:NP_499799]Y76A2B.3 [Source:RefSeq_peptide;Acc:NP_499799] BY ORTHOLOGY TO:Y76A2B.3
16.1077 -31.95 0.0145364 1300 3 1 2 [+] picture button
CBG18119 ENSCBRT00000003278 GTPase-activating protein GAP (CeGAP). [Source:Uniprot/SWISSPROT;Acc:P34288]GTPase-activating protein GAP (CeGAP). [Source:Uniprot/SWISSPROT;Acc:P34288] BY ORTHOLOGY TO:C04D8.1
14.3422 -13.8 0.0145812 1300 3 2 8 [+] picture button
CBG10853 ENSCBRT00000001355 C25B8.7 [Source:RefSeq_peptide;Acc:NP_741821]C25B8.7 [Source:RefSeq_peptide;Acc:NP_741821] BY ORTHOLOGY TO:C25B8.7
16.0107 -25.8 0.0161616 1300 2 1 2 [+] picture button
CBG20908 ENSCBRT00000000644 Y53F4B.14 [Source:RefSeq_peptide;Acc:NP_497099]Y53F4B.14 [Source:RefSeq_peptide;Acc:NP_497099] BY ORTHOLOGY TO:Y53F4B.14
16.0107 -23.45 0.0161616 1300 2 1 3 [+] picture button
CBG06143 ENSCBRT00000008351 TWiK family of potassium channels family member (twk-25) [Source:RefSeq_peptide;Acc:NP_502170]TWiK family of potassium channels family member (twk-25) [Source:RefSeq_peptide;Acc:NP_502170] BY ORTHOLOGY TO:M04B2.5
16.0107 -29.53 0.0161616 1300 4 1 4 [+] picture button
CBG05687 ENSCBRT00000005310 Y43F8C.4 [Source:RefSeq_peptide;Acc:NP_507804]Y43F8C.4 [Source:RefSeq_peptide;Acc:NP_507804] BY ORTHOLOGY TO:Y43F8C.4
15.9232 -27.81 0.0177794 1300 4 1 3 [+] picture button
CBG12451 ENSCBRT00000013182 mel-26 encodes a MATH and BTB/POZ domain-containing protein that functions as a novel substrate-specific adaptor of the CUL-3-containing E3 ubiquitin ligase. MEL-26 is required maternally for formation of mitotic spindles in the early embryo, and as a component of a ubiquitin ligase complex, for degradation of the microtubule-severing protein MEI-1 at the meiosis to mitosis transition. MEL-26 is also required maternally for embryonic morphogenesis. since MEL-26 contains a meprin-associated Traf homology (MATH) domain, it might be involved in apoptosis. [Source: WormBase]mel-26 encodes a MATH and BTB/POZ domain-containing protein that functions as a novel substrate-specific adaptor of the CUL-3-containing E3 ubiquitin ligase. MEL-26 is required maternally for formation of mitotic spindles in the early embryo, and as a component of a ubiquitin ligase complex, for degradation of the microtubule-severing protein MEI-1 at the meiosis to mitosis transition. MEL-26 is also required maternally for embryonic morphogenesis. since MEL-26 contains a meprin-associated Traf homology (MATH) domain, it might be involved in apoptosis. [Source: WormBase] BY ORTHOLOGY TO:ZK858.4
15.9146 -20.83 0.0179468 1300 3 1 4 [+] picture button

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Download table: GFF TXT
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