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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-82

165 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG09098 ENSCBRT00000008550 Putative G-protein coupled receptor B0244.6. [Source:Uniprot/SWISSPROT;Acc:Q09965]Putative G-protein coupled receptor B0244.6. [Source:Uniprot/SWISSPROT;Acc:Q09965] BY ORTHOLOGY TO:B0244.6
15.6199 -16.27 0.00012109 1300 4 1 4 [+] picture button
CBG11881 ENSCBRT00000009324 C26C6.7 [Source:RefSeq_peptide;Acc:NP_492107]C26C6.7 [Source:RefSeq_peptide;Acc:NP_492107] BY ORTHOLOGY TO:C26C6.7
17.4842 -19.68 0.000331474 1300 5 1 10 [+] picture button
CBG21338 ENSCBRT00000000959 Temporarily Assigned Gene name family member (tag-181) [Source:RefSeq_peptide;Acc:NP_492699]Temporarily Assigned Gene name family member (tag-181) [Source:RefSeq_peptide;Acc:NP_492699] BY ORTHOLOGY TO:T20F10.1
16.9895 -21.47 0.000395008 1300 2 2 4 [+] picture button
CBG04494 ENSCBRT00000008817 F59F5.7 [Source:RefSeq_peptide;Acc:NP_509769]F59F5.7 [Source:RefSeq_peptide;Acc:NP_509769] BY ORTHOLOGY TO:F59F5.7
16.6748 -21.68 0.00047393 1300 3 1 5 [+] picture button
CBG08084 ENSCBRT00000003536 clathrin coat adaptor ap3 medium chainclathrin coat adaptor ap3 medium chain BY ORTHOLOGY TO:AAEL011429-RA
17.6526 -24.8 0.00135278 1300 4 1 7 [+] picture button
CBG05989 ENSCBRT00000008524 F36H1.5 [Source:RefSeq_peptide;Acc:NP_502055]F36H1.5 [Source:RefSeq_peptide;Acc:NP_502055] BY ORTHOLOGY TO:F36H1.5
16.1775 -16.23 0.00135594 1300 4 1 5 [+] picture button
CBG00235 ENSCBRT00000001497 C48C5.3 [Source:RefSeq_peptide;Acc:NP_509514]C48C5.3 [Source:RefSeq_peptide;Acc:NP_509514] BY ORTHOLOGY TO:C48C5.3
16.3567 -14.68 0.00161302 1300 2 1 3 [+] picture button
CBG19421 ENSCBRT00000012815 Stonin-2 (Stoned B). [Source:Uniprot/SWISSPROT;Acc:Q8WXE9]Stonin-2 (Stoned B). [Source:Uniprot/SWISSPROT;Acc:Q8WXE9] BY ORTHOLOGY TO:ENSMMUT00000031123
16.1192 -19.82 0.0016758 1300 2 2 5 [+] picture button
CBG17557 ENSCBRT00000002106 F47B10.8 [Source:RefSeq_peptide;Acc:NP_509823]F47B10.8 [Source:RefSeq_peptide;Acc:NP_509823] BY ORTHOLOGY TO:F47B10.8
16.08 -17.65 0.00179861 1300 3 1 5 [+] picture button
CBG09229 ENSCBRT00000001841 toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase]toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase] BY ORTHOLOGY TO:T24A11.3
16.1897 -20.54 0.00219771 1300 5 2 14 [+] picture button
CBG16596 ENSCBRT00000014554 U3 small nucleolar RNA-associated protein 18 homolog. [Source:Uniprot/SWISSPROT;Acc:P42000]U3 small nucleolar RNA-associated protein 18 homolog. [Source:Uniprot/SWISSPROT;Acc:P42000] BY ORTHOLOGY TO:B0280.9
16.0662 -24.74 0.0022726 1300 3 1 5 [+] picture button
CBG23009 ENSCBRT00000008843 CG1504-PA [Source:RefSeq_peptide;Acc:NP_608382]CG1504-PA [Source:RefSeq_peptide;Acc:NP_608382] BY ORTHOLOGY TO:CG1504-RA
16.0891 -15.87 0.00233577 1300 7 1 9 [+] picture button
CBG09692 ENSCBRT00000005762 F28H7.7 [Source:RefSeq_peptide;Acc:NP_505744]F28H7.7 [Source:RefSeq_peptide;Acc:NP_505744] BY ORTHOLOGY TO:F28H7.7
15.9263 -17.16 0.00269542 1300 4 2 5 [+] picture button
CBG02631 ENSCBRT00000007515 C32D5.7 [Source:RefSeq_peptide;Acc:NP_495274]C32D5.7 [Source:RefSeq_peptide;Acc:NP_495274] BY ORTHOLOGY TO:C32D5.7
16.086 -20.12 0.00269771 1300 2 1 4 [+] picture button
CBG07390 ENSCBRT00000011828 C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289]C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289] BY ORTHOLOGY TO:C04A11.2
16.3412 -18.69 0.00281009 1300 6 1 8 [+] picture button
CBG13271 ENSCBRT00000001064 Y66D12A.17 encodes a paralog of GFI-3 that, like GFI-3, is distantly similar to the human anaphase promoting complex subunit APC5. [Source: WormBase]Y66D12A.17 encodes a paralog of GFI-3 that, like GFI-3, is distantly similar to the human anaphase promoting complex subunit APC5. [Source: WormBase] BY ORTHOLOGY TO:Y66D12A.17
15.811 -25.94 0.00290365 1300 9 2 11 [+] picture button
CBG15435 ENSCBRT00000010757 Probable G-protein coupled receptor K01A12.3. [Source:Uniprot/SWISSPROT;Acc:Q10042]Probable G-protein coupled receptor K01A12.3. [Source:Uniprot/SWISSPROT;Acc:Q10042] BY ORTHOLOGY TO:K01A12.3
15.7972 -16.9 0.00311679 1300 5 2 9 [+] picture button
ENSCBRT00000013323 MGC107902 protein. [Source:Uniprot/SPTREMBL;Acc:Q5FW12]MGC107902 protein. [Source:Uniprot/SPTREMBL;Acc:Q5FW12] BY ORTHOLOGY TO:ENSXETT00000015436
15.7402 -18.21 0.00315995 1300 4 1 4 [+] picture button
CBG00571 ENSCBRT00000003103 W01C9.5 [Source:RefSeq_peptide;Acc:NP_495806]W01C9.5 [Source:RefSeq_peptide;Acc:NP_495806] BY ORTHOLOGY TO:W01C9.5
16.08 -23.12 0.00319965 1300 3 1 5 [+] picture button
CBG05644 ENSCBRT00000005430 serine/threonine protein kinaseserine/threonine protein kinase BY ORTHOLOGY TO:AAEL011578-RA
15.6331 -14.09 0.00320757 1300 8 1 7 [+] picture button
CBG16052 ENSCBRT00000014261 Probable G-protein coupled receptor C43C3.2. [Source:Uniprot/SWISSPROT;Acc:Q09502]Probable G-protein coupled receptor C43C3.2. [Source:Uniprot/SWISSPROT;Acc:Q09502] BY ORTHOLOGY TO:C43C3.2
15.7431 -17.46 0.00333825 1300 1 1 3 [+] picture button
CBG19097 ENSCBRT00000013920 Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O17403]Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O17403] BY ORTHOLOGY TO:F09G2.4
15.8116 -18.98 0.00334436 1300 1 1 3 [+] picture button
CBG01078 ENSCBRT00000005238 C39F7.1 [Source:RefSeq_peptide;Acc:NP_503396]C39F7.1 [Source:RefSeq_peptide;Acc:NP_503396] BY ORTHOLOGY TO:C39F7.1
17.3555 -21.51 0.00347429 1300 6 1 6 [+] picture button
CBG04000 ENSCBRT00000009947 C41D11.5 [Source:RefSeq_peptide;Acc:NP_491373]C41D11.5 [Source:RefSeq_peptide;Acc:NP_491373] BY ORTHOLOGY TO:C41D11.5
15.6997 -17.09 0.00364803 1300 4 1 5 [+] picture button
CBG00413 ENSCBRT00000001963 C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109]C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109] BY ORTHOLOGY TO:C06A12.5
15.6902 -16.04 0.00371906 1300 3 1 5 [+] picture button
CBG02456 ENSCBRT00000006526 C17G10.7 [Source:RefSeq_peptide;Acc:NP_495090]C17G10.7 [Source:RefSeq_peptide;Acc:NP_495090] BY ORTHOLOGY TO:C17G10.7
15.7257 -14.97 0.00377447 1300 4 2 7 [+] picture button
CBG06079 ENSCBRT00000008455 Temporarily Assigned Gene name family member (tag-89) [Source:RefSeq_peptide;Acc:NP_502147]Temporarily Assigned Gene name family member (tag-89) [Source:RefSeq_peptide;Acc:NP_502147] BY ORTHOLOGY TO:H02I12.3
16.4798 -23.32 0.00379156 1300 4 2 5 [+] picture button
CBG17691 ENSCBRT00000000145 C06A6.2a [Source:RefSeq_peptide;Acc:NP_741450]C06A6.2a [Source:RefSeq_peptide;Acc:NP_741450] BY ORTHOLOGY TO:C06A6.2b
15.7309 -15.85 0.00387754 1300 2 1 2 [+] picture button
CBG16928 ENSCBRT00000011716 C34E7.3 [Source:RefSeq_peptide;Acc:NP_510148]C34E7.3 [Source:RefSeq_peptide;Acc:NP_510148] BY ORTHOLOGY TO:C34E7.3
15.853 -15.38 0.00395098 1300 4 1 7 [+] picture button
CBG00359 ENSCBRT00000002001 FMRF-Like Peptide family member (flp-17) [Source:RefSeq_peptide;Acc:NP_503051]FMRF-Like Peptide family member (flp-17) [Source:RefSeq_peptide;Acc:NP_503051] BY ORTHOLOGY TO:C52D10.11
15.3201 -19.92 0.00403639 1300 3 1 4 [+] picture button
CBG22418 ENSCBRT00000004926 Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467]Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467] BY ORTHOLOGY TO:ENSMMUT00000019170
17.2197 -12.09 0.00422409 1300 8 1 15 [+] picture button
CBG10143 ENSCBRT00000007434 M01A8.1 [Source:RefSeq_peptide;Acc:NP_499045]M01A8.1 [Source:RefSeq_peptide;Acc:NP_499045] BY ORTHOLOGY TO:M01A8.1
15.6902 -15.04 0.00435216 1300 4 2 7 [+] picture button
CBG21115 ENSCBRT00000000850 leucine rich repeat containing 58 [Source:MarkerSymbol;Acc:MGI:2443542]leucine rich repeat containing 58 [Source:MarkerSymbol;Acc:MGI:2443542] BY ORTHOLOGY TO:ENSMUST00000078717
16.3235 -19.02 0.00448855 1300 2 1 3 [+] picture button
CBG12570 ENSCBRT00000014302 C48E7.6 [Source:RefSeq_peptide;Acc:NP_491802]C48E7.6 [Source:RefSeq_peptide;Acc:NP_491802] BY ORTHOLOGY TO:C48E7.6
16.4699 -17.19 0.00450176 1300 3 2 4 [+] picture button
CBG23116 ENSCBRT00000012027 C06H2.4 is orthologous to the human gene THIAMINE TRANSPORTER 1 (SLC19A2. OMIM:603941), which when mutated leads to disease. [Source: WormBase]C06H2.4 is orthologous to the human gene THIAMINE TRANSPORTER 1 (SLC19A2. OMIM:603941), which when mutated leads to disease. [Source: WormBase] BY ORTHOLOGY TO:C06H2.4
15.6235 -16.32 0.00452742 1300 4 2 6 [+] picture button
CBG09651 ENSCBRT00000005791 T21C9.9 [Source:RefSeq_peptide;Acc:NP_505719]T21C9.9 [Source:RefSeq_peptide;Acc:NP_505719] BY ORTHOLOGY TO:T21C9.9
15.6022 -17.13 0.00473614 1300 2 1 3 [+] picture button
CBG01702 ENSCBRT00000005579 ZK180.5b [Source:RefSeq_peptide;Acc:NP_741378]ZK180.5b [Source:RefSeq_peptide;Acc:NP_741378] BY ORTHOLOGY TO:ZK180.5c
15.6748 -14.79 0.00494025 1300 5 2 6 [+] picture button
CBG05026 ENSCBRT00000010226 W05H9.4 [Source:RefSeq_peptide;Acc:NP_001024943]W05H9.4 [Source:RefSeq_peptide;Acc:NP_001024943] BY ORTHOLOGY TO:W05H9.4
15.5599 -14.17 0.00504941 1300 1 2 2 [+] picture button
CBG06140 ENSCBRT00000008359 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619] BY ORTHOLOGY TO:ENSMODT00000025936
16.0129 -18.59 0.00506366 1300 1 1 2 [+] picture button
CBG21018 ENSCBRT00000000699 Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (IPK1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9H8X2]Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (IPK1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9H8X2] BY ORTHOLOGY TO:SINFRUT00000131558
15.802 -11.74 0.00517367 1300 4 2 6 [+] picture button
CBG21122 ENSCBRT00000000844 Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21) (Nematode astacin 28). [Source:Uniprot/SWISSPROT;Acc:P98061]Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21) (Nematode astacin 28). [Source:Uniprot/SWISSPROT;Acc:P98061] BY ORTHOLOGY TO:F42A10.8
15.6316 -17.59 0.00530801 1300 3 1 4 [+] picture button
CBG23055 ENSCBRT00000011946 F17C11.11 [Source:RefSeq_peptide;Acc:NP_505790]F17C11.11 [Source:RefSeq_peptide;Acc:NP_505790] BY ORTHOLOGY TO:F17C11.11
16.5773 -23.82 0.00561551 1300 1 2 2 [+] picture button
CBG09087 ENSCBRT00000008334 Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BZD4]Kinetochore protein Nuf2 (hNuf2) (hNuf2R) (hsNuf2) (Cell division cycle-associated protein 1). [Source:Uniprot/SWISSPROT;Acc:Q9BZD4] BY ORTHOLOGY TO:ENST00000367900
15.474 -14.09 0.0057621 1300 3 1 6 [+] picture button
CBG11658 ENSCBRT00000011419 H06H21.9 [Source:RefSeq_peptide;Acc:NP_500654]H06H21.9 [Source:RefSeq_peptide;Acc:NP_500654] BY ORTHOLOGY TO:H06H21.9
15.867 -19.35 0.00589431 1300 5 2 6 [+] picture button
CBG05664 ENSCBRT00000005422 pgp-9 encodes an ATP-binding protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily. PGP-9 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, and loss of pgp-9 activity via RNAi can result in embryonic lethality. pgp-9 promoter-gfp fusion proteins are expressed in the pharynx (first and second bulbs) and in the intestine. [Source: WormBase]pgp-9 encodes an ATP-binding protein that is a member of the P-glycoprotein subclass of the ATP-binding cassette (ABC) transporter superfamily. PGP-9 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, and loss of pgp-9 activity via RNAi can result in embryonic lethality. pgp-9 promoter-gfp fusion proteins are expressed in the pharynx (first and second bulbs) and in the intestine. [Source: WormBase] BY ORTHOLOGY TO:C47A10.1
15.4194 -16.57 0.00642721 1300 7 2 7 [+] picture button
CBG07711 ENSCBRT00000010674 H13N06.2 [Source:RefSeq_peptide;Acc:NP_510558]H13N06.2 [Source:RefSeq_peptide;Acc:NP_510558] BY ORTHOLOGY TO:H13N06.2
15.4963 -18.2 0.00653158 1300 4 2 6 [+] picture button
CBG10044 ENSCBRT00000007283 C48B4.3 [Source:RefSeq_peptide;Acc:NP_499118]C48B4.3 [Source:RefSeq_peptide;Acc:NP_499118] BY ORTHOLOGY TO:C48B4.3
17.5282 -21.82 0.00658265 1300 7 2 9 [+] picture button
CBG12428 ENSCBRT00000013166 C31H5.5 [Source:RefSeq_peptide;Acc:NP_492432]C31H5.5 [Source:RefSeq_peptide;Acc:NP_492432] BY ORTHOLOGY TO:C31H5.5
15.4247 -19.03 0.00686132 1300 3 2 5 [+] picture button
CBG08644 ENSCBRT00000002960 Serpentine Receptor, class R family member (srr-6) [Source:RefSeq_peptide;Acc:NP_504346]Serpentine Receptor, class R family member (srr-6) [Source:RefSeq_peptide;Acc:NP_504346] BY ORTHOLOGY TO:C13D9.1
16.6338 -18.41 0.00692455 1300 4 1 6 [+] picture button
CBG00637 ENSCBRT00000003238 F14E5.5 [Source:RefSeq_peptide;Acc:NP_495777]F14E5.5 [Source:RefSeq_peptide;Acc:NP_495777] BY ORTHOLOGY TO:F14E5.5
15.3979 -14.68 0.00704013 1300 4 1 6 [+] picture button

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