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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-81

161 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG02456 ENSCBRT00000006526 C17G10.7 [Source:RefSeq_peptide;Acc:NP_495090]C17G10.7 [Source:RefSeq_peptide;Acc:NP_495090] BY ORTHOLOGY TO:C17G10.7
15.7257 -15.42 2.36289e-05 1300 4 2 7 [+] picture button
CBG21338 ENSCBRT00000000959 Temporarily Assigned Gene name family member (tag-181) [Source:RefSeq_peptide;Acc:NP_492699]Temporarily Assigned Gene name family member (tag-181) [Source:RefSeq_peptide;Acc:NP_492699] BY ORTHOLOGY TO:T20F10.1
17.4805 -23.87 0.000194035 1300 2 2 4 [+] picture button
CBG05989 ENSCBRT00000008524 F36H1.5 [Source:RefSeq_peptide;Acc:NP_502055]F36H1.5 [Source:RefSeq_peptide;Acc:NP_502055] BY ORTHOLOGY TO:F36H1.5
16.9571 -17.33 0.000324386 1300 4 1 5 [+] picture button
CBG11881 ENSCBRT00000009324 C26C6.7 [Source:RefSeq_peptide;Acc:NP_492107]C26C6.7 [Source:RefSeq_peptide;Acc:NP_492107] BY ORTHOLOGY TO:C26C6.7
18.1013 -19.68 0.000330556 1300 5 1 10 [+] picture button
CBG04494 ENSCBRT00000008817 F59F5.7 [Source:RefSeq_peptide;Acc:NP_509769]F59F5.7 [Source:RefSeq_peptide;Acc:NP_509769] BY ORTHOLOGY TO:F59F5.7
16.8698 -21.86 0.00039455 1300 3 1 5 [+] picture button
CBG19421 ENSCBRT00000012815 Stonin-2 (Stoned B). [Source:Uniprot/SWISSPROT;Acc:Q8WXE9]Stonin-2 (Stoned B). [Source:Uniprot/SWISSPROT;Acc:Q8WXE9] BY ORTHOLOGY TO:ENSMMUT00000031123
16.9007 -22.95 0.000408074 1300 2 2 5 [+] picture button
ENSCBRT00000013323 MGC107902 protein. [Source:Uniprot/SPTREMBL;Acc:Q5FW12]MGC107902 protein. [Source:Uniprot/SPTREMBL;Acc:Q5FW12] BY ORTHOLOGY TO:ENSXETT00000015436
16.039 -11.4 0.00113308 1300 4 1 4 [+] picture button
CBG15435 ENSCBRT00000010757 Probable G-protein coupled receptor K01A12.3. [Source:Uniprot/SWISSPROT;Acc:Q10042]Probable G-protein coupled receptor K01A12.3. [Source:Uniprot/SWISSPROT;Acc:Q10042] BY ORTHOLOGY TO:K01A12.3
16.1872 -16.9 0.00171956 1300 5 2 9 [+] picture button
CBG10143 ENSCBRT00000007434 M01A8.1 [Source:RefSeq_peptide;Acc:NP_499045]M01A8.1 [Source:RefSeq_peptide;Acc:NP_499045] BY ORTHOLOGY TO:M01A8.1
16.1775 -18.86 0.00200392 1300 4 2 7 [+] picture button
CBG02631 ENSCBRT00000007515 C32D5.7 [Source:RefSeq_peptide;Acc:NP_495274]C32D5.7 [Source:RefSeq_peptide;Acc:NP_495274] BY ORTHOLOGY TO:C32D5.7
16.086 -20.12 0.00202392 1300 2 1 4 [+] picture button
CBG08084 ENSCBRT00000003536 clathrin coat adaptor ap3 medium chainclathrin coat adaptor ap3 medium chain BY ORTHOLOGY TO:AAEL011429-RA
17.6526 -24.8 0.00268454 1300 4 1 7 [+] picture button
CBG16596 ENSCBRT00000014554 U3 small nucleolar RNA-associated protein 18 homolog. [Source:Uniprot/SWISSPROT;Acc:P42000]U3 small nucleolar RNA-associated protein 18 homolog. [Source:Uniprot/SWISSPROT;Acc:P42000] BY ORTHOLOGY TO:B0280.9
15.9677 -21.56 0.00268454 1300 3 1 5 [+] picture button
CBG17557 ENSCBRT00000002106 F47B10.8 [Source:RefSeq_peptide;Acc:NP_509823]F47B10.8 [Source:RefSeq_peptide;Acc:NP_509823] BY ORTHOLOGY TO:F47B10.8
15.9826 -19.09 0.00269651 1300 3 1 5 [+] picture button
CBG08086 ENSCBRT00000003532 Putative phosphatidylcholine:ceramide cholinephosphotransferase 2 (EC 2.7.8.27) (Sphingomyelin synthase 2). [Source:Uniprot/SWISSPROT;Acc:Q20735]Putative phosphatidylcholine:ceramide cholinephosphotransferase 2 (EC 2.7.8.27) (Sphingomyelin synthase 2). [Source:Uniprot/SWISSPROT;Acc:Q20735] BY ORTHOLOGY TO:F53H8.4
16.0951 -15.21 0.0027109 1300 2 1 3 [+] picture button
CBG00235 ENSCBRT00000001497 C48C5.3 [Source:RefSeq_peptide;Acc:NP_509514]C48C5.3 [Source:RefSeq_peptide;Acc:NP_509514] BY ORTHOLOGY TO:C48C5.3
16.0629 -13.41 0.00294989 1300 2 1 3 [+] picture button
CBG21018 ENSCBRT00000000699 Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (IPK1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9H8X2]Inositol-pentakisphosphate 2-kinase (EC 2.7.1.158) (Inositol- 1,3,4,5,6-pentakisphosphate 2-kinase) (Ins(1,3,4,5,6)P5 2-kinase) (InsP5 2-kinase) (IPK1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9H8X2] BY ORTHOLOGY TO:SINFRUT00000131558
16.5872 -12.13 0.00317657 1300 4 2 6 [+] picture button
CBG09692 ENSCBRT00000005762 F28H7.7 [Source:RefSeq_peptide;Acc:NP_505744]F28H7.7 [Source:RefSeq_peptide;Acc:NP_505744] BY ORTHOLOGY TO:F28H7.7
15.9263 -17.16 0.00329337 1300 4 2 5 [+] picture button
CBG07390 ENSCBRT00000011828 C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289]C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289] BY ORTHOLOGY TO:C04A11.2
16.0459 -18.5 0.00331237 1300 6 1 8 [+] picture button
CBG02319 ENSCBRT00000006695 similar to RIKEN cDNA 1190002C06 (MGC124825), mRNA [Source:RefSeq_dna;Acc:NM_001033887]similar to RIKEN cDNA 1190002C06 (MGC124825), mRNA [Source:RefSeq_dna;Acc:NM_001033887] BY ORTHOLOGY TO:ENSRNOT00000022017
16.0252 -18.73 0.00333531 1300 1 1 2 [+] picture button
CBG05151 ENSCBRT00000010318 Leukocyte receptor cluster member 1. [Source:Uniprot/SWISSPROT;Acc:Q96BZ8]Leukocyte receptor cluster member 1. [Source:Uniprot/SWISSPROT;Acc:Q96BZ8] BY ORTHOLOGY TO:ENSMMUT00000013547
16.1388 -17.49 0.00343666 1300 7 1 10 [+] picture button
CBG24747 ENSCBRT00000008972 T06A1.1 [Source:RefSeq_peptide;Acc:NP_503533]T06A1.1 [Source:RefSeq_peptide;Acc:NP_503533] BY ORTHOLOGY TO:T06A1.1
16.1459 -10.54 0.00367876 1300 9 1 13 [+] picture button
CBG00413 ENSCBRT00000001963 C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109]C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109] BY ORTHOLOGY TO:C06A12.5
16.4699 -15.86 0.00377188 1300 3 1 5 [+] picture button
CBG21115 ENSCBRT00000000850 leucine rich repeat containing 58 [Source:MarkerSymbol;Acc:MGI:2443542]leucine rich repeat containing 58 [Source:MarkerSymbol;Acc:MGI:2443542] BY ORTHOLOGY TO:ENSMUST00000078717
16.3235 -19.04 0.00377188 1300 2 1 3 [+] picture button
CBG00571 ENSCBRT00000003103 W01C9.5 [Source:RefSeq_peptide;Acc:NP_495806]W01C9.5 [Source:RefSeq_peptide;Acc:NP_495806] BY ORTHOLOGY TO:W01C9.5
16.08 -21.2 0.00377188 1300 3 1 5 [+] picture button
CBG05644 ENSCBRT00000005430 serine/threonine protein kinaseserine/threonine protein kinase BY ORTHOLOGY TO:AAEL011578-RA
15.6331 -14.19 0.00390462 1300 8 1 7 [+] picture button
CBG19097 ENSCBRT00000013920 Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O17403]Probable cleavage and polyadenylation specificity factor subunit 2 (Cleavage and polyadenylation specificity factor 100 kDa subunit) (CPSF 100 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:O17403] BY ORTHOLOGY TO:F09G2.4
15.8116 -18.98 0.00393748 1300 1 1 3 [+] picture button
CBG09098 ENSCBRT00000008550 Putative G-protein coupled receptor B0244.6. [Source:Uniprot/SWISSPROT;Acc:Q09965]Putative G-protein coupled receptor B0244.6. [Source:Uniprot/SWISSPROT;Acc:Q09965] BY ORTHOLOGY TO:B0244.6
15.6199 -13.74 0.00397735 1300 4 1 4 [+] picture button
CBG16052 ENSCBRT00000014261 Probable G-protein coupled receptor C43C3.2. [Source:Uniprot/SWISSPROT;Acc:Q09502]Probable G-protein coupled receptor C43C3.2. [Source:Uniprot/SWISSPROT;Acc:Q09502] BY ORTHOLOGY TO:C43C3.2
15.7431 -16.16 0.00408454 1300 1 1 3 [+] picture button
CBG09229 ENSCBRT00000001841 toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase]toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase] BY ORTHOLOGY TO:T24A11.3
15.8971 -17.6 0.00417956 1300 5 2 14 [+] picture button
CBG08644 ENSCBRT00000002960 Serpentine Receptor, class R family member (srr-6) [Source:RefSeq_peptide;Acc:NP_504346]Serpentine Receptor, class R family member (srr-6) [Source:RefSeq_peptide;Acc:NP_504346] BY ORTHOLOGY TO:C13D9.1
16.3385 -16.98 0.00426223 1300 4 1 6 [+] picture button
CBG06079 ENSCBRT00000008455 Temporarily Assigned Gene name family member (tag-89) [Source:RefSeq_peptide;Acc:NP_502147]Temporarily Assigned Gene name family member (tag-89) [Source:RefSeq_peptide;Acc:NP_502147] BY ORTHOLOGY TO:H02I12.3
16.7723 -26.45 0.00446459 1300 4 2 5 [+] picture button
CBG07432 ENSCBRT00000011091 F18H3.1 [Source:RefSeq_peptide;Acc:NP_510258]F18H3.1 [Source:RefSeq_peptide;Acc:NP_510258] BY ORTHOLOGY TO:F18H3.1
15.6538 -18.71 0.00452251 1300 3 1 3 [+] picture button
CBG22724 ENSCBRT00000004221 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL001818-RA
15.8851 -17.52 0.004527 1300 3 2 4 [+] picture button
ENSCBRT00000004619 Bloom syndrome protein (EC 3.6.1.-) (RecQ protein-like 3) (DNA helicase, RecQ-like type 2). [Source:Uniprot/SWISSPROT;Acc:P54132]Bloom syndrome protein (EC 3.6.1.-) (RecQ protein-like 3) (DNA helicase, RecQ-like type 2). [Source:Uniprot/SWISSPROT;Acc:P54132] BY ORTHOLOGY TO:ENSMMUT00000027428
15.6902 -17.08 0.00454473 1300 5 1 6 [+] picture button
CBG08234 ENSCBRT00000003571 H05L14.2 [Source:RefSeq_peptide;Acc:NP_492199]H05L14.2 [Source:RefSeq_peptide;Acc:NP_492199] BY ORTHOLOGY TO:H05L14.2
16.3983 -15.92 0.00458115 1300 4 1 5 [+] picture button
CBG16928 ENSCBRT00000011716 C34E7.3 [Source:RefSeq_peptide;Acc:NP_510148]C34E7.3 [Source:RefSeq_peptide;Acc:NP_510148] BY ORTHOLOGY TO:C34E7.3
15.853 -15.38 0.00478104 1300 4 1 7 [+] picture button
CBG22418 ENSCBRT00000004926 Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467]Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467] BY ORTHOLOGY TO:ENSMMUT00000019170
17.2197 -12.09 0.00495944 1300 8 1 15 [+] picture button
CBG01078 ENSCBRT00000005238 C39F7.1 [Source:RefSeq_peptide;Acc:NP_503396]C39F7.1 [Source:RefSeq_peptide;Acc:NP_503396] BY ORTHOLOGY TO:C39F7.1
18.14 -24.08 0.00506762 1300 6 1 6 [+] picture button
CBG12570 ENSCBRT00000014302 C48E7.6 [Source:RefSeq_peptide;Acc:NP_491802]C48E7.6 [Source:RefSeq_peptide;Acc:NP_491802] BY ORTHOLOGY TO:C48E7.6
16.4699 -17.19 0.00526203 1300 3 2 4 [+] picture button
CBG23116 ENSCBRT00000012027 C06H2.4 is orthologous to the human gene THIAMINE TRANSPORTER 1 (SLC19A2. OMIM:603941), which when mutated leads to disease. [Source: WormBase]C06H2.4 is orthologous to the human gene THIAMINE TRANSPORTER 1 (SLC19A2. OMIM:603941), which when mutated leads to disease. [Source: WormBase] BY ORTHOLOGY TO:C06H2.4
15.6235 -16.83 0.00551119 1300 4 2 6 [+] picture button
CBG09407 ENSCBRT00000006412 C34D1.4 [Source:RefSeq_peptide;Acc:NP_506291]C34D1.4 [Source:RefSeq_peptide;Acc:NP_506291] BY ORTHOLOGY TO:C34D1.4
15.5928 -15.01 0.00552769 1300 2 1 3 [+] picture button
CBG09651 ENSCBRT00000005791 T21C9.9 [Source:RefSeq_peptide;Acc:NP_505719]T21C9.9 [Source:RefSeq_peptide;Acc:NP_505719] BY ORTHOLOGY TO:T21C9.9
15.6022 -17.15 0.00576171 1300 2 1 3 [+] picture button
CBG01870 ENSCBRT00000005703 Putative potassium channel regulatory protein sup-10 precursor (Suppressor of unc-93 protein 10). [Source:Uniprot/SWISSPROT;Acc:Q17374]Putative potassium channel regulatory protein sup-10 precursor (Suppressor of unc-93 protein 10). [Source:Uniprot/SWISSPROT;Acc:Q17374] BY ORTHOLOGY TO:R09G11.1
18.0204 -27.49 0.00576468 1300 3 1 5 [+] picture button
CBG06140 ENSCBRT00000008359 YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619]YEATS domain-containing protein 4 (Glioma-amplified sequence-41) (Gas41) (NuMA-binding protein 1) (NuBI-1) (NuBI1). [Source:Uniprot/SWISSPROT;Acc:O95619] BY ORTHOLOGY TO:ENSMODT00000025936
16.0129 -18.59 0.00593378 1300 1 1 2 [+] picture button
CBG01702 ENSCBRT00000005579 ZK180.5b [Source:RefSeq_peptide;Acc:NP_741378]ZK180.5b [Source:RefSeq_peptide;Acc:NP_741378] BY ORTHOLOGY TO:ZK180.5c
15.6748 -14.82 0.00598017 1300 5 2 6 [+] picture button
CBG01940 ENSCBRT00000005771 mkk-4 encodes a MAP (mitogen-activated protein) kinase kinase that is a member of the MKK4 family of MAPKK's. MKK-4 activity is required in presynaptic neurons, in a dose-dependent manner, for normal presynaptic development and morphology. in regulating presynaptic organization, MKK-4 acts upstream of PMK-3/MAPK and downstream of DLK-1/MAPKKK, whose levels are negatively regulated by the RPM-1 ubiquitin ligase. a functional MKK-4::GFP fusion protein is expressed in the cytoplasm of many neurons as well as in other cell types, including the pharyngeal muscles. [Source: WormBase]mkk-4 encodes a MAP (mitogen-activated protein) kinase kinase that is a member of the MKK4 family of MAPKK's. MKK-4 activity is required in presynaptic neurons, in a dose-dependent manner, for normal presynaptic development and morphology. in regulating presynaptic organization, MKK-4 acts upstream of PMK-3/MAPK and downstream of DLK-1/MAPKKK, whose levels are negatively regulated by the RPM-1 ubiquitin ligase. a functional MKK-4::GFP fusion protein is expressed in the cytoplasm of many neurons as well as in other cell types, including the pharyngeal muscles. [Source: WormBase] BY ORTHOLOGY TO:F42G10.2
15.7612 -21.12 0.00606744 1300 4 2 5 [+] picture button
CBG21122 ENSCBRT00000000844 Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21) (Nematode astacin 28). [Source:Uniprot/SWISSPROT;Acc:P98061]Zinc metalloproteinase nas-28 precursor (EC 3.4.24.21) (Nematode astacin 28). [Source:Uniprot/SWISSPROT;Acc:P98061] BY ORTHOLOGY TO:F42A10.8
15.8307 -19.18 0.00623456 1300 3 1 4 [+] picture button
CBG12350 ENSCBRT00000013101 DNA-directed RNA polymerase II 33 kDa polypeptide (EC 2.7.7.6) (RPB3) (RNA polymerase II subunit 3) (RPB33) (RPB31). [Source:Uniprot/SWISSPROT;Acc:P19387]DNA-directed RNA polymerase II 33 kDa polypeptide (EC 2.7.7.6) (RPB3) (RNA polymerase II subunit 3) (RPB33) (RPB31). [Source:Uniprot/SWISSPROT;Acc:P19387] BY ORTHOLOGY TO:ENSORLT00000018933
16.08 -17.48 0.00623456 1300 1 1 1 [+] picture button
CBG13271 ENSCBRT00000001064 Y66D12A.17 encodes a paralog of GFI-3 that, like GFI-3, is distantly similar to the human anaphase promoting complex subunit APC5. [Source: WormBase]Y66D12A.17 encodes a paralog of GFI-3 that, like GFI-3, is distantly similar to the human anaphase promoting complex subunit APC5. [Source: WormBase] BY ORTHOLOGY TO:Y66D12A.17
15.5164 -23.23 0.00643745 1300 9 2 11 [+] picture button
CBG23055 ENSCBRT00000011946 F17C11.11 [Source:RefSeq_peptide;Acc:NP_505790]F17C11.11 [Source:RefSeq_peptide;Acc:NP_505790] BY ORTHOLOGY TO:F17C11.11
16.2848 -21.11 0.00658433 1300 1 2 2 [+] picture button

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