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Target Listing


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Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-73

138 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG23021 ENSCBRT00000008855 Tax1 (Human T-cell leukemia virus type I) binding protein 3. [Source:Uniprot/SPTREMBL;Acc:Q6P4W4]Tax1 (Human T-cell leukemia virus type I) binding protein 3. [Source:Uniprot/SPTREMBL;Acc:Q6P4W4] BY ORTHOLOGY TO:ENSXETT00000012770
16.1897 -19.8 1e-06 1300 6 1 3 [+] picture button
CBG01967 ENSCBRT00000005839 ZC373.4 [Source:RefSeq_peptide;Acc:NP_509689]ZC373.4 [Source:RefSeq_peptide;Acc:NP_509689] BY ORTHOLOGY TO:ZC373.4
16.0446 -21.65 2.31138e-05 1300 3 2 4 [+] picture button
CBG12139 ENSCBRT00000013296 TropoNin T family member (tnt-4) [Source:RefSeq_peptide;Acc:NP_503544]TropoNin T family member (tnt-4) [Source:RefSeq_peptide;Acc:NP_503544] BY ORTHOLOGY TO:T08B1.2a
16.2789 -17.77 0.000951966 1300 3 1 4 [+] picture button
CBG01067 ENSCBRT00000002281 The sqv-8 gene encodes a glucuronyl transferase, biochemically active in vitro, that is required for cytokinesis of one-cell embryos and for vulval morphogenesis. SQV-8 is homologous to three distinct glucuronyl transferases (GlcAT-I, GlcAT-P and GlcAT-D) that play a role in the synthesis of different glycoconjugates. the common requirement for SQV-8 in both cytokinesis and morphogenesis may be to promote filling an extracellular space with hygroscopic proteoglycans (either in the eggshell, or underneath the L4 cuticle), which in turn may cause the space to fill with fluid. [Source: WormBase]The sqv-8 gene encodes a glucuronyl transferase, biochemically active in vitro, that is required for cytokinesis of one-cell embryos and for vulval morphogenesis. SQV-8 is homologous to three distinct glucuronyl transferases (GlcAT-I, GlcAT-P and GlcAT-D) that play a role in the synthesis of different glycoconjugates. the common requirement for SQV-8 in both cytokinesis and morphogenesis may be to promote filling an extracellular space with hygroscopic proteoglycans (either in the eggshell, or underneath the L4 cuticle), which in turn may cause the space to fill with fluid. [Source: WormBase] BY ORTHOLOGY TO:ZK1307.5
16.3603 -22.91 0.00121281 1300 4 1 5 [+] picture button
CBG24569 ENSCBRT00000009791 F11G11.12 [Source:RefSeq_peptide;Acc:NP_494880]F11G11.12 [Source:RefSeq_peptide;Acc:NP_494880] BY ORTHOLOGY TO:F11G11.12
16.7643 -22.29 0.00135692 1300 4 2 6 [+] picture button
CBG18544 ENSCBRT00000010683 Phosphodiesterase 8 CG5411-PC, isoform C [Source:RefSeq_peptide;Acc:NP_726353]Phosphodiesterase 8 CG5411-PC, isoform C [Source:RefSeq_peptide;Acc:NP_726353] BY ORTHOLOGY TO:CG5411-RA
15.9172 -15.17 0.00136269 1300 5 1 6 [+] picture button
CBG20951 ENSCBRT00000000611 Serpentine Receptor, class E (epsilon) family member (sre-41) [Source:RefSeq_peptide;Acc:NP_496628]Serpentine Receptor, class E (epsilon) family member (sre-41) [Source:RefSeq_peptide;Acc:NP_496628] BY ORTHOLOGY TO:Y57A10B.5
16.3808 -17.72 0.00143545 1300 7 1 6 [+] picture button
CBG03961 ENSCBRT00000009979 G protein beta subunit-like (GBL), mRNA [Source:RefSeq_dna;Acc:NM_022372]G protein beta subunit-like (GBL), mRNA [Source:RefSeq_dna;Acc:NM_022372] BY ORTHOLOGY TO:ENSPTRT00000014090
16.2503 -22.07 0.00143815 1300 2 1 3 [+] picture button
CBG04317 ENSCBRT00000007687 C56C10.10 [Source:RefSeq_peptide;Acc:NP_495339]C56C10.10 [Source:RefSeq_peptide;Acc:NP_495339] BY ORTHOLOGY TO:C56C10.10
16.3557 -18.34 0.00154246 1300 9 1 9 [+] picture button
CBG18870 ENSCBRT00000012672 CG9004-PA [Source:RefSeq_peptide;Acc:NP_647717]CG9004-PA [Source:RefSeq_peptide;Acc:NP_647717] BY ORTHOLOGY TO:CG9004-RA
16.1215 -20.69 0.0020827 1300 2 1 1 [+] picture button
CBG02964 ENSCBRT00000006093 mat-2 encodes a subunit of the anaphase-promoting complex or cyclosome (APCC) which is a multi-subunit E3 ubiquitin ligase that targets proteins for degradation during the metaphase-to-anaphase transition of the cell cycle. mat-2 is required for chromosome segregation during meiosis I and is involved in polarity specification of the anterior/posterior axis in the developing embryo. [Source: WormBase]mat-2 encodes a subunit of the anaphase-promoting complex or cyclosome (APCC) which is a multi-subunit E3 ubiquitin ligase that targets proteins for degradation during the metaphase-to-anaphase transition of the cell cycle. mat-2 is required for chromosome segregation during meiosis I and is involved in polarity specification of the anterior/posterior axis in the developing embryo. [Source: WormBase] BY ORTHOLOGY TO:W10C6.1
16.2987 -21.46 0.00211783 1300 3 1 3 [+] picture button
CBG03490 ENSCBRT00000007239 T23F6.1 [Source:RefSeq_peptide;Acc:NP_502429]T23F6.1 [Source:RefSeq_peptide;Acc:NP_502429] BY ORTHOLOGY TO:T23F6.1
15.7437 -17.09 0.00244946 1300 4 1 3 [+] picture button
CBG00413 ENSCBRT00000001963 C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109]C06A12.5 [Source:RefSeq_peptide;Acc:NP_503109] BY ORTHOLOGY TO:C06A12.5
17.0781 -18.33 0.00257135 1300 3 1 5 [+] picture button
CBG16731 ENSCBRT00000012818 calcium activated nucleotidase 1 [Source:MarkerSymbol;Acc:MGI:1923275]calcium activated nucleotidase 1 [Source:MarkerSymbol;Acc:MGI:1923275] BY ORTHOLOGY TO:ENSMUST00000017620
16.5929 -27.4 0.00257135 1300 5 1 4 [+] picture button
CBG19625 ENSCBRT00000001816 B0454.6 [Source:RefSeq_peptide;Acc:NP_494428]B0454.6 [Source:RefSeq_peptide;Acc:NP_494428] BY ORTHOLOGY TO:B0454.6
16.1316 -23.42 0.00285339 1300 3 1 3 [+] picture button
CBG15675 ENSCBRT00000011963 Nuclear hormone receptor family member nhr-121. [Source:Uniprot/SWISSPROT;Acc:Q9TZ99]Nuclear hormone receptor family member nhr-121. [Source:Uniprot/SWISSPROT;Acc:Q9TZ99] BY ORTHOLOGY TO:E02H9.8
15.7642 -17.39 0.00288582 1300 4 1 4 [+] picture button
CBG10993 ENSCBRT00000001209 This gene encodes a protein containing a DnaJ ('J') domain that is predicted to be mitochondrial. [Source: WormBase]This gene encodes a protein containing a DnaJ ('J') domain that is predicted to be mitochondrial. [Source: WormBase] BY ORTHOLOGY TO:C55B6.2
15.9596 -27.98 0.00353204 1300 3 1 3 [+] picture button
CBG19802 ENSCBRT00000000404 Ero1-like protein precursor (EC 1.8.4.-) (Endoplasmic oxidoreductin-1- like protein). [Source:Uniprot/SWISSPROT;Acc:Q9V3A6]Ero1-like protein precursor (EC 1.8.4.-) (Endoplasmic oxidoreductin-1- like protein). [Source:Uniprot/SWISSPROT;Acc:Q9V3A6] BY ORTHOLOGY TO:CG1333-RA
15.6604 -16 0.00360443 1300 3 1 2 [+] picture button
CBG20858 ENSCBRT00000001285 C01G12.1 [Source:RefSeq_peptide;Acc:NP_497028]C01G12.1 [Source:RefSeq_peptide;Acc:NP_497028] BY ORTHOLOGY TO:C01G12.1
15.9366 -15.86 0.00369355 1300 7 1 12 [+] picture button
CBG16352 ENSCBRT00000011241 K08B5.1 [Source:RefSeq_peptide;Acc:NP_510683]K08B5.1 [Source:RefSeq_peptide;Acc:NP_510683] BY ORTHOLOGY TO:K08B5.1
16.507 -18.84 0.0037814 1300 4 2 5 [+] picture button
CBG18401 ENSCBRT00000000996 glycogen synthase 1, muscle [Source:MarkerSymbol;Acc:MGI:101805]glycogen synthase 1, muscle [Source:MarkerSymbol;Acc:MGI:101805] BY ORTHOLOGY TO:ENSMUST00000003964
15.7028 -15.43 0.00423613 1300 3 1 4 [+] picture button
CBG12731 ENSCBRT00000014332 C48B6.10 [Source:RefSeq_peptide;Acc:NP_491974]C48B6.10 [Source:RefSeq_peptide;Acc:NP_491974] BY ORTHOLOGY TO:C48B6.10
15.7695 -19.26 0.00431583 1300 5 1 5 [+] picture button
CBG01980 ENSCBRT00000005854 unc-58 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. unc-58 was originally defined by gain-of-function (gf) mutations that result in paralysis and a shortened (dumpy) body morphology due to hypercontraction of body wall muscle. unc-58 gf mutations also result in constitutive egg-laying. as loss of UNC-58 function via reversion or RNA-mediated interference (RNAi) results in either no abnormalities or only a weakly uncoordinated phenotype, UNC-58 likely functions redudantly with other TWK channels to regulate locomotion and egg-laying. UNC-58 is expressed in motor neurons and interneurons. [Source: WormBase]unc-58 encodes one of 44 C. elegans TWK (two-P domain K+) potassium channel subunits that contain two pore-forming domains and four transmembrane domains. unc-58 was originally defined by gain-of-function (gf) mutations that result in paralysis and a shortened (dumpy) body morphology due to hypercontraction of body wall muscle. unc-58 gf mutations also result in constitutive egg-laying. as loss of UNC-58 function via reversion or RNA-mediated interference (RNAi) results in either no abnormalities or only a weakly uncoordinated phenotype, UNC-58 likely functions redudantly with other TWK channels to regulate locomotion and egg-laying. UNC-58 is expressed in motor neurons and interneurons. [Source: WormBase] BY ORTHOLOGY TO:T06H11.1a
15.7959 -12.98 0.00434882 1300 2 1 3 [+] picture button
CBG00115 ENSCBRT00000001548 scd-1 encodes a novel protein with several regions that are extremely glutamine (Q) rich, interspersed with other residues (usually alanine). SCD-1 affects signalling by proteins in the DAF-7/transforming growth factor (TGF)-beta pathway (DAF-1, DAF-8, and DAF-14), and the Q-rich regions of SCD-1 protein may mediate epigenetic changes of stably heritable tertiary conformation. [Source: WormBase]scd-1 encodes a novel protein with several regions that are extremely glutamine (Q) rich, interspersed with other residues (usually alanine). SCD-1 affects signalling by proteins in the DAF-7/transforming growth factor (TGF)-beta pathway (DAF-1, DAF-8, and DAF-14), and the Q-rich regions of SCD-1 protein may mediate epigenetic changes of stably heritable tertiary conformation. [Source: WormBase] BY ORTHOLOGY TO:H20J18.1a
15.536 -17.36 0.00465171 1300 3 2 2 [+] picture button
CBG17724 ENSCBRT00000000169 Protein sidekick homolog precursor (Neuronal IgCAM protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9N3X8]Protein sidekick homolog precursor (Neuronal IgCAM protein 4). [Source:Uniprot/SWISSPROT;Acc:Q9N3X8] BY ORTHOLOGY TO:Y42H9B.2
15.9137 -16.48 0.00480212 1300 5 2 9 [+] picture button
CBG16677 ENSCBRT00000014697 phosphorylase b kinasephosphorylase b kinase BY ORTHOLOGY TO:AAEL007651-RA
15.8026 -21.99 0.00483097 1300 5 2 8 [+] picture button
CBG21465 ENSCBRT00000002718 Y59C2A.1 [Source:RefSeq_peptide;Acc:NP_494213]Y59C2A.1 [Source:RefSeq_peptide;Acc:NP_494213] BY ORTHOLOGY TO:Y59C2A.1
16.1443 -17.94 0.0048836 1300 1 1 3 [+] picture button
CBG16796 ENSCBRT00000012857 adm-4 encodes a member of the ADAM (disintegrin plus metalloprotease) family. ADM-4 is highly expressed in most post-embryonic tissues. [Source: WormBase]adm-4 encodes a member of the ADAM (disintegrin plus metalloprotease) family. ADM-4 is highly expressed in most post-embryonic tissues. [Source: WormBase] BY ORTHOLOGY TO:ZK154.7
15.6982 -23.91 0.00522768 1300 3 1 3 [+] picture button
CBG01002 ENSCBRT00000002147 Putative acid phosphatase C05C10.1 (EC 3.1.3.2). [Source:Uniprot/SWISSPROT;Acc:Q09448]Putative acid phosphatase C05C10.1 (EC 3.1.3.2). [Source:Uniprot/SWISSPROT;Acc:Q09448] BY ORTHOLOGY TO:C05C10.1
17.973 -30.83 0.0052458 1300 6 1 7 [+] picture button
CBG23347 ENSCBRT00000011461 Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 (EC 3.2.1.113) (Processing alpha-1,2-mannosidase C52E4.5) (Alpha-1,2-mannosidase C52E4.5). [Source:Uniprot/SWISSPROT;Acc:Q18788]Mannosyl-oligosaccharide 1,2-alpha-mannosidase C52E4.5 (EC 3.2.1.113) (Processing alpha-1,2-mannosidase C52E4.5) (Alpha-1,2-mannosidase C52E4.5). [Source:Uniprot/SWISSPROT;Acc:Q18788] BY ORTHOLOGY TO:C52E4.5
15.697 -21.94 0.00553797 1300 7 2 12 [+] picture button
CBG15144 ENSCBRT00000010341 Elongation factor G 2, mitochondrial precursor (mEF-G 2) (Elongation factor G2). [Source:Uniprot/SWISSPROT;Acc:Q969S9]Elongation factor G 2, mitochondrial precursor (mEF-G 2) (Elongation factor G2). [Source:Uniprot/SWISSPROT;Acc:Q969S9] BY ORTHOLOGY TO:ENSXETT00000013707
17.8916 -23.3 0.00575164 1300 2 1 2 [+] picture button
CBG02584 ENSCBRT00000007546 F40H3.3 [Source:RefSeq_peptide;Acc:NP_495231]F40H3.3 [Source:RefSeq_peptide;Acc:NP_495231] BY ORTHOLOGY TO:F40H3.3
17.8532 -23.51 0.00600653 1300 2 1 2 [+] picture button
CBG21741 ENSCBRT00000004547 The unc-129 gene encodes a member of the TGF-beta family of secreted growth factor signaling molecules. UNC-129 is required for proper axonal guidance of commissural motorneurons and for proper migration of the distal tip cells of the somatic gonad. UNC-129 is expressed in dorsal body wall muscle and at present does not appear to act through the known TGF-beta type I and II receptors. [Source: WormBase]The unc-129 gene encodes a member of the TGF-beta family of secreted growth factor signaling molecules. UNC-129 is required for proper axonal guidance of commissural motorneurons and for proper migration of the distal tip cells of the somatic gonad. UNC-129 is expressed in dorsal body wall muscle and at present does not appear to act through the known TGF-beta type I and II receptors. [Source: WormBase] BY ORTHOLOGY TO:C53D6.2
15.5655 -20.78 0.00660969 1300 7 2 9 [+] picture button
CBG05719 ENSCBRT00000009188 TATA-binding protein, putativeTATA-binding protein, putative BY ORTHOLOGY TO:AAEL010341-RA
15.4695 -24.5 0.0069174 1300 2 1 2 [+] picture button
CBG21910 ENSCBRT00000008216 TWiK family of potassium channels family member (twk-1) [Source:RefSeq_peptide;Acc:NP_492054]TWiK family of potassium channels family member (twk-1) [Source:RefSeq_peptide;Acc:NP_492054] BY ORTHOLOGY TO:F21C3.1
17.7222 -27.84 0.00696422 1300 3 1 3 [+] picture button
CBG06982 ENSCBRT00000012348 ventricular zone expressed PH domain homolog 1 [Source:RefSeq_peptide;Acc:NP_078897]ventricular zone expressed PH domain homolog 1 [Source:RefSeq_peptide;Acc:NP_078897] BY ORTHOLOGY TO:ENSXETT00000026743
15.5255 -25.02 0.00723935 1300 2 2 3 [+] picture button
CBG06699 ENSCBRT00000009710 BTB and MATH domain-containing protein 39. [Source:Uniprot/SWISSPROT;Acc:P90846]BTB and MATH domain-containing protein 39. [Source:Uniprot/SWISSPROT;Acc:P90846] BY ORTHOLOGY TO:F25H9.4
15.4671 -17.87 0.00729129 1300 4 2 4 [+] picture button
CBG22418 ENSCBRT00000004926 Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467]Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467] BY ORTHOLOGY TO:ENSMMUT00000019170
15.4656 -17.74 0.00759872 1300 8 1 15 [+] picture button
CBG04746 ENSCBRT00000010572 T13H5.6 [Source:RefSeq_peptide;Acc:NP_495801]T13H5.6 [Source:RefSeq_peptide;Acc:NP_495801] BY ORTHOLOGY TO:T13H5.6
15.4838 -14.94 0.0080148 1300 2 2 3 [+] picture button
CBG17088 ENSCBRT00000000138 Nuclear Hormone Receptor family member (nhr-271) [Source:RefSeq_peptide;Acc:NP_507194]Nuclear Hormone Receptor family member (nhr-271) [Source:RefSeq_peptide;Acc:NP_507194] BY ORTHOLOGY TO:T03E6.3
17.5888 -28.02 0.0080954 1300 5 1 5 [+] picture button
ENSCBRT00000013308 The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase]The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase] BY ORTHOLOGY TO:ZK652.5
15.3859 -19.28 0.0082241 1300 7 1 10 [+] picture button
CBG21747 ENSCBRT00000004548 disulfide isomerase [Source:RefSeq_peptide;Acc:NP_078991]disulfide isomerase [Source:RefSeq_peptide;Acc:NP_078991] BY ORTHOLOGY TO:ENSGALT00000034107
17.5605 -16.73 0.00835787 1300 7 1 8 [+] picture button
CBG04057 ENSCBRT00000009892 F33D11.5 [Source:RefSeq_peptide;Acc:NP_491692]F33D11.5 [Source:RefSeq_peptide;Acc:NP_491692] BY ORTHOLOGY TO:F33D11.5
15.3522 -18.52 0.00914067 1300 2 1 2 [+] picture button
CBG07341 ENSCBRT00000011805 The elt-3 gene encodes a GATA transcription factor expressed in the embryonic hypodermis. specifically, it is expressed in expressed in all of the major hypodermal cells except the lateral seam cells. [Source: WormBase]The elt-3 gene encodes a GATA transcription factor expressed in the embryonic hypodermis. specifically, it is expressed in expressed in all of the major hypodermal cells except the lateral seam cells. [Source: WormBase] BY ORTHOLOGY TO:K02B9.4
15.4947 -19.13 0.00936489 1300 3 2 3 [+] picture button
CBG18000 ENSCBRT00000003036 The acy-1 gene encodes a protein with 40% identity to mammalian adenylyl cyclases, most closely related to the divergent mouse isoform type IX, that affects viability, muscle contraction, locomotion, and molting. it acts genetically downstream of gsa-1 and is expressed in excitable cells. [Source: WormBase]The acy-1 gene encodes a protein with 40% identity to mammalian adenylyl cyclases, most closely related to the divergent mouse isoform type IX, that affects viability, muscle contraction, locomotion, and molting. it acts genetically downstream of gsa-1 and is expressed in excitable cells. [Source: WormBase] BY ORTHOLOGY TO:F17C8.1
15.3769 -16 0.00949357 1300 6 2 6 [+] picture button
CBG02873 ENSCBRT00000006184 ooc-3 encodes a nematode-specific protein with a predicted signal sequence, four predicted transmembrane domains, and two putative PEST sequences. OOC-3 is probably localized to the endoplasmic reticulum (ER), and is maternally required for correct localization of PAR-2 and PAR-3 in the P1 blastomere of the two-cell stage embryo. specifically, OOC-3 is required for restricting PAR-3 to the anterior cortex of the P1 blastomere to assure PAR-2 localization at the posterior cortex. more generally, OOC-3 is required to establish asymmetrical anterior-posterior cortical domains and spindle orientation in P1. [Source: WormBase]ooc-3 encodes a nematode-specific protein with a predicted signal sequence, four predicted transmembrane domains, and two putative PEST sequences. OOC-3 is probably localized to the endoplasmic reticulum (ER), and is maternally required for correct localization of PAR-2 and PAR-3 in the P1 blastomere of the two-cell stage embryo. specifically, OOC-3 is required for restricting PAR-3 to the anterior cortex of the P1 blastomere to assure PAR-2 localization at the posterior cortex. more generally, OOC-3 is required to establish asymmetrical anterior-posterior cortical domains and spindle orientation in P1. [Source: WormBase] BY ORTHOLOGY TO:B0334.11a
15.4021 -17.95 0.00985093 1300 2 1 4 [+] picture button
CBG15137 ENSCBRT00000010303 conserved hypothetical proteinconserved hypothetical protein BY ORTHOLOGY TO:AAEL013840-RA
17.4033 -25.3 0.00997769 1300 3 1 3 [+] picture button
CBG02116 ENSCBRT00000004189 C43H6.7 [Source:RefSeq_peptide;Acc:NP_508435]C43H6.7 [Source:RefSeq_peptide;Acc:NP_508435] BY ORTHOLOGY TO:C43H6.7
15.3406 -16.51 0.0100436 1300 4 1 3 [+] picture button
CBG18288 ENSCBRT00000001658 W06F12.2b [Source:RefSeq_peptide;Acc:NP_499833]W06F12.2b [Source:RefSeq_peptide;Acc:NP_499833] BY ORTHOLOGY TO:W06F12.2b
17.394 -26.7 0.010083 1300 5 2 5 [+] picture button
CBG06100 ENSCBRT00000008427 ZK809.5b [Source:RefSeq_peptide;Acc:NP_001023625]ZK809.5b [Source:RefSeq_peptide;Acc:NP_001023625] BY ORTHOLOGY TO:ZK809.5b
17.3822 -23.1 0.0102174 1300 4 1 4 [+] picture button

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