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Target Listing


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Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-35

213 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG21492 ENSCBRT00000002731 W03D2.9 [Source:RefSeq_peptide;Acc:NP_500475]W03D2.9 [Source:RefSeq_peptide;Acc:NP_500475] BY ORTHOLOGY TO:W03D2.9
14.6147 -16.21 0.000122687 1300 4 1 3 [+] picture button
CBG15755 ENSCBRT00000012086 UNCoordinated family member (unc-25) [Source:RefSeq_peptide;Acc:NP_499689]UNCoordinated family member (unc-25) [Source:RefSeq_peptide;Acc:NP_499689] BY ORTHOLOGY TO:Y37D8A.23a
14.9561 -21.78 0.000148279 1300 3 1 5 [+] picture button
CBG09724 ENSCBRT00000005685 F32D8.1 [Source:RefSeq_peptide;Acc:NP_505770]F32D8.1 [Source:RefSeq_peptide;Acc:NP_505770] BY ORTHOLOGY TO:F32D8.1
16.1007 -25.23 0.000167864 1300 3 2 10 [+] picture button
CBG21626 ENSCBRT00000003833 Progestin and adipoQ receptor family member 3 (Progestin and adipoQ receptor family member III). [Source:Uniprot/SWISSPROT;Acc:Q6TCH7]Progestin and adipoQ receptor family member 3 (Progestin and adipoQ receptor family member III). [Source:Uniprot/SWISSPROT;Acc:Q6TCH7] BY ORTHOLOGY TO:ENSGACT00000023505
16.08 -24 0.000289916 1300 5 2 14 [+] picture button
CBG23169 ENSCBRT00000012110 F47G9.3 [Source:RefSeq_peptide;Acc:NP_505875]F47G9.3 [Source:RefSeq_peptide;Acc:NP_505875] BY ORTHOLOGY TO:F47G9.3
15.8851 -20.42 0.000453588 1300 3 2 10 [+] picture button
CBG12017 ENSCBRT00000011708 Probable histone-lysine N-methyltransferase lin-59 (EC 2.1.1.43) (Abnormal cell lineage protein 59). [Source:Uniprot/SWISSPROT;Acc:O44757]Probable histone-lysine N-methyltransferase lin-59 (EC 2.1.1.43) (Abnormal cell lineage protein 59). [Source:Uniprot/SWISSPROT;Acc:O44757] BY ORTHOLOGY TO:T12F5.4
15.6902 -21.74 0.000475228 1300 4 1 13 [+] picture button
CBG17943 ENSCBRT00000002990 NHL (ring finger b-box coiled coil) domain containing family member (nhl-2) [Source:RefSeq_peptide;Acc:NP_498026]NHL (ring finger b-box coiled coil) domain containing family member (nhl-2) [Source:RefSeq_peptide;Acc:NP_498026] BY ORTHOLOGY TO:F26F4.7
15.8822 -20.97 0.000524543 1300 5 2 9 [+] picture button
CBG00969 ENSCBRT00000002211 R53.5 [Source:RefSeq_peptide;Acc:NP_496154]R53.5 [Source:RefSeq_peptide;Acc:NP_496154] BY ORTHOLOGY TO:R53.5
15.5834 -20.67 0.000569918 1300 7 1 10 [+] picture button
CBG20664 ENSCBRT00000001442 Y54G11A.2 [Source:RefSeq_peptide;Acc:NP_496971]Y54G11A.2 [Source:RefSeq_peptide;Acc:NP_496971] BY ORTHOLOGY TO:Y54G11A.2
15.4727 -26.02 0.000719562 1300 2 1 5 [+] picture button
CBG18111 ENSCBRT00000003267 Dual oxidase maturation factor 2 (Dual oxidase activator 2). [Source:Uniprot/SWISSPROT;Acc:Q1HG44]Dual oxidase maturation factor 2 (Dual oxidase activator 2). [Source:Uniprot/SWISSPROT;Acc:Q1HG44] BY ORTHOLOGY TO:ENSPTRT00000012973
16.1648 -21.72 0.000803111 1300 3 2 11 [+] picture button
CBG21213 ENSCBRT00000000873 Zinc metalloproteinase nas-1 precursor (EC 3.4.24.21) (Nematode astacin 1). [Source:Uniprot/SWISSPROT;Acc:O62243]Zinc metalloproteinase nas-1 precursor (EC 3.4.24.21) (Nematode astacin 1). [Source:Uniprot/SWISSPROT;Acc:O62243] BY ORTHOLOGY TO:F45G2.1
15.6188 -21.77 0.00106224 1300 2 2 8 [+] picture button
CBG00982 ENSCBRT00000002183 Y54G11B.1 [Source:RefSeq_peptide;Acc:NP_497004]Y54G11B.1 [Source:RefSeq_peptide;Acc:NP_497004] BY ORTHOLOGY TO:Y54G11B.1
15.0266 -20.53 0.0011853 1300 5 1 10 [+] picture button
CBG09229 ENSCBRT00000001841 toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase]toh-1 encodes an astacin-like metalloprotease. TOH-1 is predicted to function as a secreted protease. experiments that specifically assessed toh-1's role in molting indicate that toh-1(RNAi) causes no abnormal phenotypes. [Source: WormBase] BY ORTHOLOGY TO:T24A11.3
15.3119 -21.04 0.00122747 1300 5 2 14 [+] picture button
CBG18919 ENSCBRT00000014164 F13H6.1 [Source:RefSeq_peptide;Acc:NP_504620]F13H6.1 [Source:RefSeq_peptide;Acc:NP_504620] BY ORTHOLOGY TO:F13H6.1
15.5682 -17.12 0.00129984 1300 7 1 13 [+] picture button
CBG06070 ENSCBRT00000008481 Protein LRP16. [Source:Uniprot/SWISSPROT;Acc:Q9BQ69]Protein LRP16. [Source:Uniprot/SWISSPROT;Acc:Q9BQ69] BY ORTHOLOGY TO:ENST00000255681
15.3979 -18.57 0.00131772 1300 7 1 11 [+] picture button
CBG13695 ENSCBRT00000012709 Y105C5A.23 [Source:RefSeq_peptide;Acc:NP_502887]Y105C5A.23 [Source:RefSeq_peptide;Acc:NP_502887] BY ORTHOLOGY TO:Y105C5A.23
16.1874 -19.46 0.00138563 1300 3 1 8 [+] picture button
CBG13202 ENSCBRT00000001116 T28D6.5a [Source:RefSeq_peptide;Acc:NP_499458]T28D6.5a [Source:RefSeq_peptide;Acc:NP_499458] BY ORTHOLOGY TO:T28D6.5b
15.008 -19.09 0.00162424 1300 8 2 15 [+] picture button
CBG19253 ENSCBRT00000013458 Hypothetical LOC496683. [Source:Uniprot/SPTREMBL;Acc:Q5M8V4]Hypothetical LOC496683. [Source:Uniprot/SPTREMBL;Acc:Q5M8V4] BY ORTHOLOGY TO:ENSXETT00000035487
15.0342 -23.13 0.00164349 1300 5 1 16 [+] picture button
CBG11983 ENSCBRT00000011745 T28F2.7 [Source:RefSeq_peptide;Acc:NP_491196]T28F2.7 [Source:RefSeq_peptide;Acc:NP_491196] BY ORTHOLOGY TO:T28F2.7
15.3932 -19.81 0.00185773 1300 7 1 9 [+] picture button
CBG20408 ENSCBRT00000003627 cell division cycle 40 homolog [Source:RefSeq_peptide;Acc:NP_001006407]cell division cycle 40 homolog [Source:RefSeq_peptide;Acc:NP_001006407] BY ORTHOLOGY TO:ENSGALT00000024299
17.9048 -22.02 0.00191979 1300 1 1 8 [+] picture button
CBG14603 ENSCBRT00000003279 uvt-2 encodes a protein that contains four EF-hand calcium binding motifs with similarity to human calmodulin. mRNA weakly expressed in L1 through L4 larval stages and in the adult hermaphrodite. [Source: WormBase]uvt-2 encodes a protein that contains four EF-hand calcium binding motifs with similarity to human calmodulin. mRNA weakly expressed in L1 through L4 larval stages and in the adult hermaphrodite. [Source: WormBase] BY ORTHOLOGY TO:C24H10.5
14.9106 -21.75 0.00227031 1300 2 2 9 [+] picture button
CBG21225 ENSCBRT00000000864 lis-1 encodes an ortholog of human LIS1, which when mutated leads to lissencephaly (OMIM:247200). it also encodes an ortholog of the Aspergillus nidulans nudF, which mediates nuclear migration along Aspergillus hyphae. [Source: WormBase]lis-1 encodes an ortholog of human LIS1, which when mutated leads to lissencephaly (OMIM:247200). it also encodes an ortholog of the Aspergillus nidulans nudF, which mediates nuclear migration along Aspergillus hyphae. [Source: WormBase] BY ORTHOLOGY TO:T03F6.5
15.0978 -17.4 0.0024203 1300 5 2 7 [+] picture button
CBG18350 ENSCBRT00000001602 BTB/POZ domain-containing protein KCTD7. [Source:Uniprot/SWISSPROT;Acc:Q96MP8]BTB/POZ domain-containing protein KCTD7. [Source:Uniprot/SWISSPROT;Acc:Q96MP8] BY ORTHOLOGY TO:ENST00000380830
14.8322 -17.95 0.00242197 1300 4 1 12 [+] picture button
CBG11969 ENSCBRT00000011755 T03F1.11 [Source:RefSeq_peptide;Acc:NP_491241]T03F1.11 [Source:RefSeq_peptide;Acc:NP_491241] BY ORTHOLOGY TO:T03F1.11
14.7606 -20.59 0.00300064 1300 4 1 9 [+] picture button
CBG01358 ENSCBRT00000002240 Seven TM Receptor family member (str-131) [Source:RefSeq_peptide;Acc:NP_505084]Seven TM Receptor family member (str-131) [Source:RefSeq_peptide;Acc:NP_505084] BY ORTHOLOGY TO:C09H5.6
15.9922 -21.56 0.00321752 1300 4 1 9 [+] picture button
CBG00669 ENSCBRT00000003213 gei-14 encodes a novel protein that interacts with GEX-3 in yeast two-hybrid assays. [Source: WormBase]gei-14 encodes a novel protein that interacts with GEX-3 in yeast two-hybrid assays. [Source: WormBase] BY ORTHOLOGY TO:K01C8.5
14.5208 -24.03 0.003273 1300 5 1 4 [+] picture button
CBG01736 ENSCBRT00000005603 T22B11.1 [Source:RefSeq_peptide;Acc:NP_500616]T22B11.1 [Source:RefSeq_peptide;Acc:NP_500616] BY ORTHOLOGY TO:T22B11.1
14.4233 -21.1 0.003273 1300 6 1 7 [+] picture button
CBG11380 ENSCBRT00000014029 col-43 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens. [Source: WormBase]col-43 encodes a collagen that is individually dispensable for viability and gross morphology in mass RNAi screens. [Source: WormBase] BY ORTHOLOGY TO:ZC513.8
14.5208 -21.51 0.003273 1300 8 2 8 [+] picture button
CBG03854 ENSCBRT00000008695 Enhancer of Ksr-1 Lethality family member (ekl-2) [Source:RefSeq_peptide;Acc:NP_492622]Enhancer of Ksr-1 Lethality family member (ekl-2) [Source:RefSeq_peptide;Acc:NP_492622] BY ORTHOLOGY TO:F52F12.6
14.7526 -22.25 0.00334569 1300 5 1 10 [+] picture button
CBG14514 ENSCBRT00000003468 ceh-1 encodes a protein that contains a homeobox domain. [Source: WormBase]ceh-1 encodes a protein that contains a homeobox domain. [Source: WormBase] BY ORTHOLOGY TO:F16H11.4
17.347 -28.08 0.00347111 1300 7 2 21 [+] picture button
CBG18736 ENSCBRT00000014526 Y64G10A.6 [Source:RefSeq_peptide;Acc:NP_502736]Y64G10A.6 [Source:RefSeq_peptide;Acc:NP_502736] BY ORTHOLOGY TO:Y64G10A.6
14.6893 -17.18 0.00361159 1300 3 1 8 [+] picture button
CBG14282 ENSCBRT00000002711 F47B7.7 [Source:RefSeq_peptide;Acc:NP_508655]F47B7.7 [Source:RefSeq_peptide;Acc:NP_508655] BY ORTHOLOGY TO:F47B7.7
14.9585 -22.56 0.00362591 1300 3 1 6 [+] picture button
CBG03450 ENSCBRT00000007200 DeHydrogenases, Short chain family member (dhs-12) [Source:RefSeq_peptide;Acc:NP_501850]DeHydrogenases, Short chain family member (dhs-12) [Source:RefSeq_peptide;Acc:NP_501850] BY ORTHOLOGY TO:K08F4.9
15.157 -23.01 0.00373133 1300 5 1 13 [+] picture button
ENSCBRT00000002550 cDNA sequence BC038925 [Source:MarkerSymbol;Acc:MGI:2679717]cDNA sequence BC038925 [Source:MarkerSymbol;Acc:MGI:2679717] BY ORTHOLOGY TO:ENSMUST00000057773
14.9309 -24.44 0.00381909 1300 2 1 4 [+] picture button
CBG05771 ENSCBRT00000009131 Zinc metalloproteinase nas-8 precursor (EC 3.4.24.21) (Nematode astacin 8). [Source:Uniprot/SWISSPROT;Acc:Q18439]Zinc metalloproteinase nas-8 precursor (EC 3.4.24.21) (Nematode astacin 8). [Source:Uniprot/SWISSPROT;Acc:Q18439] BY ORTHOLOGY TO:C34D4.9
15.2225 -23.43 0.00382725 1300 8 2 12 [+] picture button
CBG09577 ENSCBRT00000005924 B0024.2 [Source:RefSeq_peptide;Acc:NP_505647]B0024.2 [Source:RefSeq_peptide;Acc:NP_505647] BY ORTHOLOGY TO:B0024.2
14.8097 -18.43 0.00402363 1300 7 1 9 [+] picture button
CBG19271 ENSCBRT00000013474 F36D4.4 [Source:RefSeq_peptide;Acc:NP_505436]F36D4.4 [Source:RefSeq_peptide;Acc:NP_505436] BY ORTHOLOGY TO:F36D4.4
14.5383 -20.21 0.00418976 1300 2 1 5 [+] picture button
CBG05460 ENSCBRT00000004771 voltage-gated potassium channelvoltage-gated potassium channel BY ORTHOLOGY TO:AAEL007104-RA
14.9382 -21.13 0.00460878 1300 6 1 8 [+] picture button
CBG03394 ENSCBRT00000007162 abt-1 encodes a predicted ATP-binding cassette (ABC) transporter that is a member of the ABCA subfamily of transport proteins. ABT-1 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of abt-1 activity via RNAi results in no obvious defects, the precise role of abt-1 in C. elegans development and/or behavior is not yet known. [Source: WormBase]abt-1 encodes a predicted ATP-binding cassette (ABC) transporter that is a member of the ABCA subfamily of transport proteins. ABT-1 is predicted to function as a transmembrane protein that couples energy to transport of various molecules across membranes, but as loss of abt-1 activity via RNAi results in no obvious defects, the precise role of abt-1 in C. elegans development and/or behavior is not yet known. [Source: WormBase] BY ORTHOLOGY TO:C24F3.5
17.0674 -28.23 0.00466848 1300 2 1 6 [+] picture button
CBG02748 ENSCBRT00000007338 ZK930.2 [Source:RefSeq_peptide;Acc:NP_496539]ZK930.2 [Source:RefSeq_peptide;Acc:NP_496539] BY ORTHOLOGY TO:ZK930.2
17.0546 -23.27 0.00473245 1300 10 1 17 [+] picture button
CBG23137 ENSCBRT00000012045 CYtochrome P450 family member (cyp-29A2) [Source:RefSeq_peptide;Acc:NP_505847]CYtochrome P450 family member (cyp-29A2) [Source:RefSeq_peptide;Acc:NP_505847] BY ORTHOLOGY TO:T19B10.1
14.4981 -23.56 0.00536838 1300 1 1 6 [+] picture button
CBG02851 ENSCBRT00000006221 F07A11.1 [Source:RefSeq_peptide;Acc:NP_496478]F07A11.1 [Source:RefSeq_peptide;Acc:NP_496478] BY ORTHOLOGY TO:F07A11.1
14.4529 -22.08 0.0054065 1300 5 1 8 [+] picture button
CBG16600 ENSCBRT00000014550 B0280.13 [Source:RefSeq_peptide;Acc:NP_741212]B0280.13 [Source:RefSeq_peptide;Acc:NP_741212] BY ORTHOLOGY TO:B0280.13
16.8252 -23.43 0.00603334 1300 2 1 8 [+] picture button
CBG12758 ENSCBRT00000013717 ser-3 encodes a putative homolog of mammalian 5-HT4 metabotropic serotonin receptors. SER-3 is required for normal inhibition of movement by 5-HT, with ser-3 mutants being hyperactive and excessively curling their male tails (but this phenotype is reversed by exogenous 5-HT, with ser-3 mutants then becoming sluggish). SER-3 activity is required for normally high brood sizes and for embryonic development, and weakly required for pharyngeal pumping. SER-3 is expressed in pharynx, head and tail neurons, nerve ring, and intestine. [Source: WormBase]ser-3 encodes a putative homolog of mammalian 5-HT4 metabotropic serotonin receptors. SER-3 is required for normal inhibition of movement by 5-HT, with ser-3 mutants being hyperactive and excessively curling their male tails (but this phenotype is reversed by exogenous 5-HT, with ser-3 mutants then becoming sluggish). SER-3 activity is required for normally high brood sizes and for embryonic development, and weakly required for pharyngeal pumping. SER-3 is expressed in pharynx, head and tail neurons, nerve ring, and intestine. [Source: WormBase] BY ORTHOLOGY TO:K02F2.6
14.3741 -18.7 0.00617432 1300 6 2 12 [+] picture button
CBG08512 ENSCBRT00000000273 hypothetical proteinhypothetical protein BY ORTHOLOGY TO:AAEL013086-RA
14.4157 -20.52 0.00625835 1300 5 2 9 [+] picture button
CBG13332 ENSCBRT00000001012 ZK673.6 [Source:RefSeq_peptide;Acc:NP_496249]ZK673.6 [Source:RefSeq_peptide;Acc:NP_496249] BY ORTHOLOGY TO:ZK673.6
16.785 -24.61 0.00629541 1300 2 1 9 [+] picture button
CBG22959 ENSCBRT00000008778 Replication factor C subunit 5 (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36) (Activator 1 36 kDa subunit) (A1 36 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P40937]Replication factor C subunit 5 (Replication factor C 36 kDa subunit) (RF-C 36 kDa subunit) (RFC36) (Activator 1 36 kDa subunit) (A1 36 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:P40937] BY ORTHOLOGY TO:ENSOANT00000028942
14.3292 -20.61 0.00632791 1300 3 1 7 [+] picture button
CBG16856 ENSCBRT00000012764 Growth factor receptor-bound protein 2 (Adapter protein GRB2) (SH2/SH3 adapter GRB2). [Source:Uniprot/SWISSPROT;Acc:Q07883]Growth factor receptor-bound protein 2 (Adapter protein GRB2) (SH2/SH3 adapter GRB2). [Source:Uniprot/SWISSPROT;Acc:Q07883] BY ORTHOLOGY TO:ENSGALT00000013008
14.5062 -20.22 0.00633439 1300 6 2 8 [+] picture button
CBG16546 ENSCBRT00000014587 This gene encodes a homolog of mammalian TNX [Source: WormBase]This gene encodes a homolog of mammalian TNX [Source: WormBase] BY ORTHOLOGY TO:R13F6.4a
14.5073 -19.65 0.00645672 1300 4 1 7 [+] picture button
CBG06591 ENSCBRT00000009608 F52F10.2 [Source:RefSeq_peptide;Acc:NP_503443]F52F10.2 [Source:RefSeq_peptide;Acc:NP_503443] BY ORTHOLOGY TO:F52F10.2
16.6977 -23.62 0.00690491 1300 4 1 14 [+] picture button

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