spacer

Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-253

201 hits found.


Page 1 of 5
1 2 3 4 5 next >>

Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
picture button picture button picture button picture button picture button picture button picture button picture button picture button picture button
CBG00644 ENSCBRT00000003240 F49E12.9 [Source:RefSeq_peptide;Acc:NP_495763]F49E12.9 [Source:RefSeq_peptide;Acc:NP_495763] BY ORTHOLOGY TO:F49E12.9
15.013 -18.55 0.000370312 1300 4 1 2 [+] picture button
ENSCBRT00000006737 Y34B4A.5 [Source:RefSeq_peptide;Acc:NP_508892]Y34B4A.5 [Source:RefSeq_peptide;Acc:NP_508892] BY ORTHOLOGY TO:Y34B4A.5
15.7996 -20.23 0.000552016 1300 5 1 6 [+] picture button
CBG16868 ENSCBRT00000012771 F45E1.2 [Source:RefSeq_peptide;Acc:NP_509348]F45E1.2 [Source:RefSeq_peptide;Acc:NP_509348] BY ORTHOLOGY TO:F45E1.2
14.7322 -17.11 0.000634825 1300 4 1 3 [+] picture button
CBG09720 ENSCBRT00000005690 C29A12.6 [Source:RefSeq_peptide;Acc:NP_505768]C29A12.6 [Source:RefSeq_peptide;Acc:NP_505768] BY ORTHOLOGY TO:C29A12.6
15.2722 -13.58 0.00146005 1300 6 1 4 [+] picture button
CBG06053 ENSCBRT00000008515 gtl-2 encodes a predicted receptor-activated calcium channel and represents a family of calcium channels, the other two family members being gtl-1 and gon-2. [Source: WormBase]gtl-2 encodes a predicted receptor-activated calcium channel and represents a family of calcium channels, the other two family members being gtl-1 and gon-2. [Source: WormBase] BY ORTHOLOGY TO:F54D1.5
14.3911 -16.07 0.00146005 1300 5 1 3 [+] picture button
CBG12889 ENSCBRT00000013783 T09B4.7 [Source:RefSeq_peptide;Acc:NP_491776]T09B4.7 [Source:RefSeq_peptide;Acc:NP_491776] BY ORTHOLOGY TO:T09B4.7
15.6161 -22.17 0.00161021 1300 3 1 2 [+] picture button
CBG04636 ENSCBRT00000010530 F47B8.6 [Source:RefSeq_peptide;Acc:NP_506552]F47B8.6 [Source:RefSeq_peptide;Acc:NP_506552] BY ORTHOLOGY TO:F47B8.6
17.554 -12.33 0.00227128 1300 7 1 9 [+] picture button
CBG18050 ENSCBRT00000003144 A homolog of a member of the cadherin superfamily that is involved in cell-cell adhesion. [Source: WormBase]A homolog of a member of the cadherin superfamily that is involved in cell-cell adhesion. [Source: WormBase] BY ORTHOLOGY TO:F25F2.2
14.1319 -18.3 0.00237096 1300 4 1 3 [+] picture button
CBG04752 ENSCBRT00000010579 CRAL/TRIO and GOLD domain containing family member (ctg-2) [Source:RefSeq_peptide;Acc:NP_495795]CRAL/TRIO and GOLD domain containing family member (ctg-2) [Source:RefSeq_peptide;Acc:NP_495795] BY ORTHOLOGY TO:T13H5.2
14.626 -12.32 0.00249612 1300 4 1 4 [+] picture button
CBG19775 ENSCBRT00000000374 W09C5.5 [Source:RefSeq_peptide;Acc:NP_493390]W09C5.5 [Source:RefSeq_peptide;Acc:NP_493390] BY ORTHOLOGY TO:W09C5.5
14.3422 -14.32 0.00261689 1300 3 1 2 [+] picture button
CBG13511 ENSCBRT00000009369 K08E7.6 [Source:RefSeq_peptide;Acc:NP_502410]K08E7.6 [Source:RefSeq_peptide;Acc:NP_502410] BY ORTHOLOGY TO:K08E7.6
13.9196 -11.32 0.00266861 1300 5 1 4 [+] picture button
CBG09258 ENSCBRT00000006276 Y38A10A.2 [Source:RefSeq_peptide;Acc:NP_504570]Y38A10A.2 [Source:RefSeq_peptide;Acc:NP_504570] BY ORTHOLOGY TO:Y38A10A.2
15.0517 -12.12 0.00276217 1300 5 2 5 [+] picture button
CBG20765 ENSCBRT00000001354 Serpentine receptor class epsilon-45 (Protein sre-45). [Source:Uniprot/SWISSPROT;Acc:O02275]Serpentine receptor class epsilon-45 (Protein sre-45). [Source:Uniprot/SWISSPROT;Acc:O02275] BY ORTHOLOGY TO:F54F11.3
14.3127 -14.55 0.00276493 1300 3 2 3 [+] picture button
CBG05074 ENSCBRT00000010269 C15B12.8 [Source:RefSeq_peptide;Acc:NP_741814]C15B12.8 [Source:RefSeq_peptide;Acc:NP_741814] BY ORTHOLOGY TO:C15B12.8
15.3701 -17.74 0.00302673 1300 4 1 6 [+] picture button
CBG04624 ENSCBRT00000010514 C15H11.2 [Source:RefSeq_peptide;Acc:NP_506566]C15H11.2 [Source:RefSeq_peptide;Acc:NP_506566] BY ORTHOLOGY TO:C15H11.2
14.304 -14.96 0.00355347 1300 6 1 4 [+] picture button
CBG01526 ENSCBRT00000001846 ZK994.3 [Source:RefSeq_peptide;Acc:NP_505188]ZK994.3 [Source:RefSeq_peptide;Acc:NP_505188] BY ORTHOLOGY TO:ZK994.3
16.9753 -26.14 0.00401056 1300 3 2 3 [+] picture button
CBG09230 ENSCBRT00000001842 C31H1.1 [Source:RefSeq_peptide;Acc:NP_500865]C31H1.1 [Source:RefSeq_peptide;Acc:NP_500865] BY ORTHOLOGY TO:C31H1.1
14.1495 -17.77 0.0040802 1300 3 1 3 [+] picture button
CBG06780 ENSCBRT00000009610 Serpentine Receptor, class T family member (srt-69) [Source:RefSeq_peptide;Acc:NP_504408]Serpentine Receptor, class T family member (srt-69) [Source:RefSeq_peptide;Acc:NP_504408] BY ORTHOLOGY TO:B0238.8
14.205 -16.16 0.00425602 1300 4 1 3 [+] picture button
CBG03308 ENSCBRT00000004992 mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) [Source:RefSeq_peptide;Acc:NP_115662]mediator of RNA polymerase II transcription, subunit 10 homolog (NUT2, S. cerevisiae) [Source:RefSeq_peptide;Acc:NP_115662] BY ORTHOLOGY TO:ENSGALT00000021339
14.008 -12.49 0.00426406 1300 3 1 2 [+] picture button
CBG16221 ENSCBRT00000012620 CG5840-PB, isoform B [Source:RefSeq_peptide;Acc:NP_732243]CG5840-PB, isoform B [Source:RefSeq_peptide;Acc:NP_732243] BY ORTHOLOGY TO:CG5840-RA
13.8037 -14.89 0.00432866 1300 2 1 1 [+] picture button
CBG08446 ENSCBRT00000000240 Y70C5C.5 [Source:RefSeq_peptide;Acc:NP_507230]Y70C5C.5 [Source:RefSeq_peptide;Acc:NP_507230] BY ORTHOLOGY TO:Y70C5C.5
13.9016 -11.71 0.00432866 1300 3 1 2 [+] picture button
CBG19796 ENSCBRT00000000398 Exocyst complex component 8 (Exocyst complex 84 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q8IYI6]Exocyst complex component 8 (Exocyst complex 84 kDa subunit). [Source:Uniprot/SWISSPROT;Acc:Q8IYI6] BY ORTHOLOGY TO:ENSXETT00000046289
16.6411 -19.23 0.00556633 1300 5 1 6 [+] picture button
CBG06013 ENSCBRT00000008564 Signal peptide protease CG11840-PA [Source:RefSeq_peptide;Acc:NP_523444]Signal peptide protease CG11840-PA [Source:RefSeq_peptide;Acc:NP_523444] BY ORTHOLOGY TO:CG11840-RA
15.0666 -12.3 0.00600441 1300 1 1 1 [+] picture button
CBG14246 ENSCBRT00000002689 C18B2.1 [Source:RefSeq_peptide;Acc:NP_508624]C18B2.1 [Source:RefSeq_peptide;Acc:NP_508624] BY ORTHOLOGY TO:C18B2.1
13.9142 -11.15 0.00600848 1300 2 2 2 [+] picture button
CBG09489 ENSCBRT00000005991 R186.7 [Source:RefSeq_peptide;Acc:NP_506247]R186.7 [Source:RefSeq_peptide;Acc:NP_506247] BY ORTHOLOGY TO:R186.7
16.5449 -25.92 0.00611637 1300 2 1 2 [+] picture button
CBG05911 ENSCBRT00000008996 Tumor suppressor candidate 4 (NPR2-like) (Gene 21 protein) (G21 protein). [Source:Uniprot/SWISSPROT;Acc:Q8WTW4]Tumor suppressor candidate 4 (NPR2-like) (Gene 21 protein) (G21 protein). [Source:Uniprot/SWISSPROT;Acc:Q8WTW4] BY ORTHOLOGY TO:ENSGACT00000001667
16.5103 -21.78 0.00632697 1300 1 1 1 [+] picture button
CBG19592 ENSCBRT00000001783 Signal recognition particle 72 kDa protein (SRP72). [Source:Uniprot/SWISSPROT;Acc:O76094]Signal recognition particle 72 kDa protein (SRP72). [Source:Uniprot/SWISSPROT;Acc:O76094] BY ORTHOLOGY TO:ENSORLT00000025306
16.4362 -18.49 0.00680278 1300 7 1 10 [+] picture button
CBG06776 ENSCBRT00000009613 N-acetyltransferase 12 [Source:RefSeq_peptide;Acc:NP_001011713]N-acetyltransferase 12 [Source:RefSeq_peptide;Acc:NP_001011713] BY ORTHOLOGY TO:ENSOANT00000018750
13.7972 -11.06 0.00745535 1300 3 1 4 [+] picture button
CBG22299 ENSCBRT00000003557 F28A10.1 [Source:RefSeq_peptide;Acc:NP_493824]F28A10.1 [Source:RefSeq_peptide;Acc:NP_493824] BY ORTHOLOGY TO:F28A10.1
13.7554 -11.15 0.0076767 1300 3 1 3 [+] picture button
CBG02970 ENSCBRT00000006090 NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 51 kDa subunit) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1). [Source:Uniprot/SWISSPROT;Acc:P49821]NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial precursor (EC 1.6.5.3) (EC 1.6.99.3) (NADH-ubiquinone oxidoreductase 51 kDa subunit) (Complex I-51kD) (CI-51kD) (NADH dehydrogenase flavoprotein 1). [Source:Uniprot/SWISSPROT;Acc:P49821] BY ORTHOLOGY TO:ENSMODT00000027144
14.3382 -9.43 0.00782457 1300 5 1 4 [+] picture button
CBG16169 ENSCBRT00000012590 B0416.3 [Source:RefSeq_peptide;Acc:NP_509565]B0416.3 [Source:RefSeq_peptide;Acc:NP_509565] BY ORTHOLOGY TO:B0416.3
16.2675 -13.88 0.00802341 1300 4 1 4 [+] picture button
CBG01360 ENSCBRT00000002242 M02H5.8 [Source:RefSeq_peptide;Acc:NP_503206]M02H5.8 [Source:RefSeq_peptide;Acc:NP_503206] BY ORTHOLOGY TO:M02H5.8
16.2659 -18.17 0.00803611 1300 4 1 4 [+] picture button
CBG06090 ENSCBRT00000008443 ZK792.7 [Source:RefSeq_peptide;Acc:NP_502214]ZK792.7 [Source:RefSeq_peptide;Acc:NP_502214] BY ORTHOLOGY TO:ZK792.7
16.2622 -20.42 0.00806507 1300 4 1 4 [+] picture button
CBG24717 ENSCBRT00000008161 H23L24.2 [Source:RefSeq_peptide;Acc:NP_501497]H23L24.2 [Source:RefSeq_peptide;Acc:NP_501497] BY ORTHOLOGY TO:H23L24.2
13.7151 -11.06 0.00825024 1300 3 1 3 [+] picture button
CBG22283 ENSCBRT00000003595 spe-15 encodes an unconventional myosin, and is homologous to both Drosophila and mouse myosin VI. spe-15 was identified in screens for mutants that have defective spermatogenesis. spe-15 is required during the terminal stages of spermatogenesis for the asymmetric partitioning of organelles like the mitochondria and for the proper partitioning of specialized structures called the fibrous-body membranous organelles into the spermatid. mutant spe-15 spermatids contain actin filaments in contrast to wild-type which lack them. spe-15 is also required for the proper morphology and activation of the spermatid. the human gene MYOSIN VI (MYO6. OMIM:600970), when mutated leads to disease that affects hearing. [Source: WormBase]spe-15 encodes an unconventional myosin, and is homologous to both Drosophila and mouse myosin VI. spe-15 was identified in screens for mutants that have defective spermatogenesis. spe-15 is required during the terminal stages of spermatogenesis for the asymmetric partitioning of organelles like the mitochondria and for the proper partitioning of specialized structures called the fibrous-body membranous organelles into the spermatid. mutant spe-15 spermatids contain actin filaments in contrast to wild-type which lack them. spe-15 is also required for the proper morphology and activation of the spermatid. the human gene MYOSIN VI (MYO6. OMIM:600970), when mutated leads to disease that affects hearing. [Source: WormBase] BY ORTHOLOGY TO:F47G6.4
16.1601 -17.17 0.00891158 1300 7 1 7 [+] picture button
CBG05433 ENSCBRT00000004732 Y73B6BL.1 is orthologous to the human gene TRANSTHYRETIN (PREALBUMIN, AMYLOIDOSIS TYPE I) (TYR. OMIM:176300), which when mutated leads to disease. [Source: WormBase]Y73B6BL.1 is orthologous to the human gene TRANSTHYRETIN (PREALBUMIN, AMYLOIDOSIS TYPE I) (TYR. OMIM:176300), which when mutated leads to disease. [Source: WormBase] BY ORTHOLOGY TO:Y73B6BL.1
16.0947 -14.17 0.00949961 1300 3 1 3 [+] picture button
CBG04110 ENSCBRT00000010092 F32B5.2 [Source:RefSeq_peptide;Acc:NP_491026]F32B5.2 [Source:RefSeq_peptide;Acc:NP_491026] BY ORTHOLOGY TO:F32B5.2
16.0431 -16.03 0.00998937 1300 2 1 2 [+] picture button
CBG08022 ENSCBRT00000003428 Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7). [Source:Uniprot/SWISSPROT;Acc:P0C024]Peroxisomal coenzyme A diphosphatase NUDT7 (EC 3.6.1.-) (Nucleoside diphosphate-linked moiety X motif 7) (Nudix motif 7). [Source:Uniprot/SWISSPROT;Acc:P0C024] BY ORTHOLOGY TO:ENSMMUT00000016527
15.9619 -17.67 0.0108133 1300 4 1 4 [+] picture button
CBG19792 ENSCBRT00000000390 Y105E8A.25 [Source:RefSeq_peptide;Acc:NP_740953]Y105E8A.25 [Source:RefSeq_peptide;Acc:NP_740953] BY ORTHOLOGY TO:Y105E8A.25
15.9575 -18.75 0.0108596 1300 2 1 2 [+] picture button
CBG24264 ENSCBRT00000006486 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:RefSeq_peptide;Acc:NP_957478]proteasome (prosome, macropain) 26S subunit, non-ATPase, 1 [Source:RefSeq_peptide;Acc:NP_957478] BY ORTHOLOGY TO:ENSDART00000007346
15.8914 -18.31 0.0115819 1300 4 1 4 [+] picture button
CBG00692 ENSCBRT00000003157 Regulator of chromosome condensation (Cell cycle regulatory protein) (RCC1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q18211]Regulator of chromosome condensation (Cell cycle regulatory protein) (RCC1 homolog). [Source:Uniprot/SWISSPROT;Acc:Q18211] BY ORTHOLOGY TO:C26D10.1
13.8301 -11.05 0.0116381 1300 3 1 3 [+] picture button
CBG18823 ENSCBRT00000012677 Traf and Tnf receptor associated protein [Source:MarkerSymbol;Acc:MGI:1860486]Traf and Tnf receptor associated protein [Source:MarkerSymbol;Acc:MGI:1860486] BY ORTHOLOGY TO:ENSMUST00000038039
15.8825 -20.99 0.011683 1300 3 1 3 [+] picture button
CBG08421 ENSCBRT00000012893 Serpentine Receptor, class X family member (srx-13) [Source:RefSeq_peptide;Acc:NP_500040]Serpentine Receptor, class X family member (srx-13) [Source:RefSeq_peptide;Acc:NP_500040] BY ORTHOLOGY TO:C44B12.4
15.8692 -18.43 0.0118354 1300 3 1 4 [+] picture button
CBG06954 ENSCBRT00000012261 D1069.4 [Source:RefSeq_peptide;Acc:NP_493716]D1069.4 [Source:RefSeq_peptide;Acc:NP_493716] BY ORTHOLOGY TO:D1069.4
15.7617 -15.87 0.0131405 1300 4 1 5 [+] picture button
CBG21548 ENSCBRT00000003817 Transmembrane protein 16H. [Source:Uniprot/SWISSPROT;Acc:Q9HCE9]Transmembrane protein 16H. [Source:Uniprot/SWISSPROT;Acc:Q9HCE9] BY ORTHOLOGY TO:ENSMMUT00000022806
15.7403 -17.72 0.0134161 1300 5 2 5 [+] picture button
CBG07390 ENSCBRT00000011828 C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289]C04A11.2 [Source:RefSeq_peptide;Acc:NP_510289] BY ORTHOLOGY TO:C04A11.2
15.7241 -18.19 0.0136291 1300 6 1 8 [+] picture button
CBG21050 ENSCBRT00000000191 C04C3.2 [Source:RefSeq_peptide;Acc:NP_500341]C04C3.2 [Source:RefSeq_peptide;Acc:NP_500341] BY ORTHOLOGY TO:C04C3.2
15.6785 -20.1 0.0142468 1300 2 1 2 [+] picture button
CBG03465 ENSCBRT00000007212 Pre-mRNA-splicing factor 18 (PRP18 homolog) (hPRP18). [Source:Uniprot/SWISSPROT;Acc:Q99633]Pre-mRNA-splicing factor 18 (PRP18 homolog) (hPRP18). [Source:Uniprot/SWISSPROT;Acc:Q99633] BY ORTHOLOGY TO:ENSOANT00000024236
15.6198 -16.68 0.0150833 1300 2 1 2 [+] picture button
CBG04432 ENSCBRT00000008924 R09H10.5 [Source:RefSeq_peptide;Acc:NP_501964]R09H10.5 [Source:RefSeq_peptide;Acc:NP_501964] BY ORTHOLOGY TO:R09H10.5
15.5979 -15.43 0.0154071 1300 5 1 4 [+] picture button
CBG23369 ENSCBRT00000011480 R07B7.6 [Source:RefSeq_peptide;Acc:NP_506027]R07B7.6 [Source:RefSeq_peptide;Acc:NP_506027] BY ORTHOLOGY TO:R07B7.6
15.5659 -13.7 0.0158926 1300 2 1 3 [+] picture button

Page 1 of 5
1 2 3 4 5 next >>

Download table: GFF TXT
spacer
spacer