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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-245

135 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG21461 ENSCBRT00000002721 Membralin. [Source:Uniprot/SWISSPROT;Acc:Q4ZIN3]Membralin. [Source:Uniprot/SWISSPROT;Acc:Q4ZIN3] BY ORTHOLOGY TO:ENSORLT00000000131
14.2432 -11.93 1e-06 1300 4 1 1 [+] picture button
CBG20699 ENSCBRT00000001494 Nuclear Hormone Receptor family member (nhr-70) [Source:RefSeq_peptide;Acc:NP_507636]Nuclear Hormone Receptor family member (nhr-70) [Source:RefSeq_peptide;Acc:NP_507636] BY ORTHOLOGY TO:Y51A2D.17
16.3648 -18.19 0.000285781 1300 6 1 6 [+] picture button
CBG22418 ENSCBRT00000004926 Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467]Frizzled-5 precursor (Fz-5) (hFz5) (FzE5). [Source:Uniprot/SWISSPROT;Acc:Q13467] BY ORTHOLOGY TO:ENSMMUT00000019170
15.6543 -10.8 0.000559667 1300 8 1 15 [+] picture button
CBG00907 ENSCBRT00000003942 Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7]Uncharacterized protein C6orf137 (Fragment). [Source:Uniprot/SPTREMBL;Acc:Q5T9V7] BY ORTHOLOGY TO:SINFRUT00000157836
15.6111 -13.1 0.000854684 1300 1 2 1 [+] picture button
CBG19352 ENSCBRT00000013534 tRNA wybutosine-synthesizing protein 2 homolog (EC 2.1.1.-) (tRNA methyltransferase 12). [Source:Uniprot/SWISSPROT;Acc:Q53H54]tRNA wybutosine-synthesizing protein 2 homolog (EC 2.1.1.-) (tRNA methyltransferase 12). [Source:Uniprot/SWISSPROT;Acc:Q53H54] BY ORTHOLOGY TO:ENST00000328599
15.2589 -13.35 0.00112425 1300 1 1 1 [+] picture button
CBG23471 ENSCBRT00000011584 TWiK family of potassium channels family member (twk-14) [Source:RefSeq_peptide;Acc:NP_506103]TWiK family of potassium channels family member (twk-14) [Source:RefSeq_peptide;Acc:NP_506103] BY ORTHOLOGY TO:K01D12.4
15.507 -18.51 0.00118036 1300 6 2 6 [+] picture button
CBG06848 ENSCBRT00000007279 Xylulose kinase (EC 2.7.1.17) (Xylulokinase). [Source:Uniprot/SWISSPROT;Acc:O75191]Xylulose kinase (EC 2.7.1.17) (Xylulokinase). [Source:Uniprot/SWISSPROT;Acc:O75191] BY ORTHOLOGY TO:ENSGALT00000009966
15.3763 -21.49 0.00158043 1300 4 1 5 [+] picture button
CBG06934 ENSCBRT00000007385 Putative serine/threonine-protein kinase ZK507.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34635]Putative serine/threonine-protein kinase ZK507.3 (EC 2.7.11.1). [Source:Uniprot/SWISSPROT;Acc:P34635] BY ORTHOLOGY TO:ZK507.3
15.0388 -24.78 0.00177508 1300 4 1 2 [+] picture button
CBG01979 ENSCBRT00000005851 flp-2 encodes a predicted FMRFamide-like peptide neurotransmitter. expressed in the pharyngeal neuron I5. [Source: WormBase]flp-2 encodes a predicted FMRFamide-like peptide neurotransmitter. expressed in the pharyngeal neuron I5. [Source: WormBase] BY ORTHOLOGY TO:W07E11.3b
16.6849 -29.58 0.002519 1300 5 1 10 [+] picture button
ENSCBRT00000013308 The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase]The ceh-23 gene encodes a homeodomain protein required for a specific differentiated trait of the thermosensory interneuron AIY. [Source: WormBase] BY ORTHOLOGY TO:ZK652.5
14.6677 -15.47 0.00307055 1300 7 1 10 [+] picture button
CBG00365 ENSCBRT00000001998 C08F8.4 [Source:RefSeq_peptide;Acc:NP_502091]C08F8.4 [Source:RefSeq_peptide;Acc:NP_502091] BY ORTHOLOGY TO:C08F8.4
14.627 -16.56 0.00312234 1300 6 1 5 [+] picture button
CBG19888 ENSCBRT00000002426 T19E7.1 [Source:RefSeq_peptide;Acc:NP_500843]T19E7.1 [Source:RefSeq_peptide;Acc:NP_500843] BY ORTHOLOGY TO:T19E7.1
15.068 -19.91 0.00344462 1300 5 1 3 [+] picture button
CBG16720 ENSCBRT00000012804 F46C8.7 [Source:RefSeq_peptide;Acc:NP_509275]F46C8.7 [Source:RefSeq_peptide;Acc:NP_509275] BY ORTHOLOGY TO:F46C8.7
14.4528 -12.97 0.00443693 1300 3 2 2 [+] picture button
CBG03541 ENSCBRT00000006652 HIRA protein (TUP1-like enhancer of split protein 1). [Source:Uniprot/SWISSPROT;Acc:P54198]HIRA protein (TUP1-like enhancer of split protein 1). [Source:Uniprot/SWISSPROT;Acc:P54198] BY ORTHOLOGY TO:ENST00000263208
16.2924 -13.27 0.00445646 1300 5 2 5 [+] picture button
CBG08382 ENSCBRT00000013056 R10H10.3 [Source:RefSeq_peptide;Acc:NP_501918]R10H10.3 [Source:RefSeq_peptide;Acc:NP_501918] BY ORTHOLOGY TO:R10H10.3
15.5223 -20.52 0.00446267 1300 3 1 2 [+] picture button
CBG00559 ENSCBRT00000003095 F54C9.7 [Source:RefSeq_peptide;Acc:NP_495813]F54C9.7 [Source:RefSeq_peptide;Acc:NP_495813] BY ORTHOLOGY TO:F54C9.7
14.5811 -14.88 0.00451469 1300 2 1 2 [+] picture button
CBG02874 ENSCBRT00000006183 B0334.3a [Source:RefSeq_peptide;Acc:NP_496454]B0334.3a [Source:RefSeq_peptide;Acc:NP_496454] BY ORTHOLOGY TO:B0334.3b
14.3443 -16.3 0.00452071 1300 4 1 4 [+] picture button
CBG17376 ENSCBRT00000001160 Innexin-2 (Protein opu-2). [Source:Uniprot/SWISSPROT;Acc:Q9U3K5]Innexin-2 (Protein opu-2). [Source:Uniprot/SWISSPROT;Acc:Q9U3K5] BY ORTHOLOGY TO:F08G12.10
14.6303 -13.88 0.00457914 1300 5 1 4 [+] picture button
CBG03167 ENSCBRT00000006897 K08F8.5b [Source:RefSeq_peptide;Acc:NP_495864]K08F8.5b [Source:RefSeq_peptide;Acc:NP_495864] BY ORTHOLOGY TO:K08F8.5a
14.6674 -17.69 0.00476066 1300 2 1 3 [+] picture button
CBG02582 ENSCBRT00000007554 EXPulsion defective (defecation) family member (exp-1) [Source:RefSeq_peptide;Acc:NP_495229]EXPulsion defective (defecation) family member (exp-1) [Source:RefSeq_peptide;Acc:NP_495229] BY ORTHOLOGY TO:H35N03.1
14.5523 -17.4 0.00478311 1300 2 2 2 [+] picture button
CBG25096 ENSCBRT00000000615 F15A4.11 [Source:RefSeq_peptide;Acc:NP_496652]F15A4.11 [Source:RefSeq_peptide;Acc:NP_496652] BY ORTHOLOGY TO:F15A4.11
14.8736 -24.27 0.00489211 1300 3 1 3 [+] picture button
CBG17958 ENSCBRT00000003002 CG10075-PA [Source:RefSeq_peptide;Acc:NP_648064]CG10075-PA [Source:RefSeq_peptide;Acc:NP_648064] BY ORTHOLOGY TO:CG10075-RA
14.6292 -18.81 0.0051376 1300 3 2 3 [+] picture button
CBG07622 ENSCBRT00000011105 C11G10.2 [Source:RefSeq_peptide;Acc:NP_510516]C11G10.2 [Source:RefSeq_peptide;Acc:NP_510516] BY ORTHOLOGY TO:C11G10.2
15.087 -26.67 0.0052671 1300 4 1 4 [+] picture button
CBG21183 ENSCBRT00000000897 Uncharacterized protein KIAA0350. [Source:Uniprot/SWISSPROT;Acc:Q2KHT3]Uncharacterized protein KIAA0350. [Source:Uniprot/SWISSPROT;Acc:Q2KHT3] BY ORTHOLOGY TO:ENSGALT00000011608
16.628 -17.24 0.00590409 1300 3 1 3 [+] picture button
ENSCBRT00000014409 Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q9NTY3]Novel protein. [Source:Uniprot/SPTREMBL;Acc:Q9NTY3] BY ORTHOLOGY TO:ENSMODT00000038846
14.4429 -16.48 0.00594949 1300 3 1 4 [+] picture button
CBG11998 ENSCBRT00000011732 C32E8.6a [Source:RefSeq_peptide;Acc:NP_740831]C32E8.6a [Source:RefSeq_peptide;Acc:NP_740831] BY ORTHOLOGY TO:C32E8.6a
15.118 -16.48 0.00595081 1300 3 1 3 [+] picture button
CBG13365 ENSCBRT00000009470 Putative serine carboxypeptidase C08H9.1 (EC 3.4.16.-). [Source:Uniprot/SWISSPROT;Acc:P52714]Putative serine carboxypeptidase C08H9.1 (EC 3.4.16.-). [Source:Uniprot/SWISSPROT;Acc:P52714] BY ORTHOLOGY TO:C08H9.1
16.8558 -23.75 0.00615888 1300 2 1 2 [+] picture button
CBG14834 ENSCBRT00000006950 C15H9.10 [Source:RefSeq_peptide;Acc:NP_509024]C15H9.10 [Source:RefSeq_peptide;Acc:NP_509024] BY ORTHOLOGY TO:C15H9.10
14.4233 -18.49 0.00618581 1300 5 1 5 [+] picture button
CBG07016 ENSCBRT00000012389 djr-1.1 encodes an ortholog of DJ-1 (OMIM:602533, mutated in early-onset Parkinson disease). DJR-1.1 is required for resistance to rotenone, a mitochondrial complex I inhibitors that mimics Parkinson disease (PD). djr-1.1(RNAi) animals are partly rescued from PD-like sensitivity by D-beta-hydroxybutyrate or tauroursodeoxycholic acid, and fully rescued by both. by orthology with DJ-1, DJR-1.1 may promote stability of the transcription factors SKN-1 or SKNR-1 (homologs of mammalian NFE2L2). [Source: WormBase]djr-1.1 encodes an ortholog of DJ-1 (OMIM:602533, mutated in early-onset Parkinson disease). DJR-1.1 is required for resistance to rotenone, a mitochondrial complex I inhibitors that mimics Parkinson disease (PD). djr-1.1(RNAi) animals are partly rescued from PD-like sensitivity by D-beta-hydroxybutyrate or tauroursodeoxycholic acid, and fully rescued by both. by orthology with DJ-1, DJR-1.1 may promote stability of the transcription factors SKN-1 or SKNR-1 (homologs of mammalian NFE2L2). [Source: WormBase] BY ORTHOLOGY TO:B0432.2
16.8252 -20.01 0.00636422 1300 2 1 2 [+] picture button
CBG01220 ENSCBRT00000005085 Y38H6C.17 [Source:RefSeq_peptide;Acc:NP_507960]Y38H6C.17 [Source:RefSeq_peptide;Acc:NP_507960] BY ORTHOLOGY TO:Y38H6C.17
16.7622 -25.26 0.00680871 1300 1 1 1 [+] picture button
CBG04580 ENSCBRT00000010477 Y40H4A.2 [Source:RefSeq_peptide;Acc:NP_506609]Y40H4A.2 [Source:RefSeq_peptide;Acc:NP_506609] BY ORTHOLOGY TO:Y40H4A.2
14.5053 -13.58 0.00743523 1300 3 1 3 [+] picture button
CBG02922 ENSCBRT00000006134 B0491.4 [Source:RefSeq_peptide;Acc:NP_496423]B0491.4 [Source:RefSeq_peptide;Acc:NP_496423] BY ORTHOLOGY TO:B0491.4
16.5773 -21.29 0.0082995 1300 3 1 3 [+] picture button
CBG06911 ENSCBRT00000007371 K02D10.4 [Source:RefSeq_peptide;Acc:NP_498941]K02D10.4 [Source:RefSeq_peptide;Acc:NP_498941] BY ORTHOLOGY TO:K02D10.4
16.5673 -23.28 0.00838851 1300 3 1 3 [+] picture button
CBG10147 ENSCBRT00000007438 T02C1.1 [Source:RefSeq_peptide;Acc:NP_499044]T02C1.1 [Source:RefSeq_peptide;Acc:NP_499044] BY ORTHOLOGY TO:T02C1.1
16.4873 -26.39 0.00913822 1300 3 1 3 [+] picture button
CBG05761 ENSCBRT00000009137 TruB pseudouridine (psi) synthase homolog 2 (E. coli) [Source:MarkerSymbol;Acc:MGI:2442186]TruB pseudouridine (psi) synthase homolog 2 (E. coli) [Source:MarkerSymbol;Acc:MGI:2442186] BY ORTHOLOGY TO:ENSMUST00000048044
16.4521 -19.68 0.00948858 1300 2 1 2 [+] picture button
CBG02175 ENSCBRT00000004197 Y102A11A.6 [Source:RefSeq_peptide;Acc:NP_508375]Y102A11A.6 [Source:RefSeq_peptide;Acc:NP_508375] BY ORTHOLOGY TO:Y102A11A.6
14.237 -17.64 0.00952464 1300 5 1 5 [+] picture button
CBG10857 ENSCBRT00000001345 Nuclear Hormone Receptor family member (nhr-173) [Source:RefSeq_peptide;Acc:NP_509119]Nuclear Hormone Receptor family member (nhr-173) [Source:RefSeq_peptide;Acc:NP_509119] BY ORTHOLOGY TO:C56E10.1
16.3074 -17.02 0.0110737 1300 2 1 2 [+] picture button
CBG17739 ENSCBRT00000000175 C26B2.7 [Source:RefSeq_peptide;Acc:NP_501342]C26B2.7 [Source:RefSeq_peptide;Acc:NP_501342] BY ORTHOLOGY TO:C26B2.7
16.302 -23.01 0.0111369 1300 6 2 7 [+] picture button
CBG07580 ENSCBRT00000011134 C05G5.1 [Source:RefSeq_peptide;Acc:NP_510447]C05G5.1 [Source:RefSeq_peptide;Acc:NP_510447] BY ORTHOLOGY TO:C05G5.1
16.2182 -18.23 0.0121786 1300 3 1 4 [+] picture button
CBG16046 ENSCBRT00000014263 F15G9.2 [Source:RefSeq_peptide;Acc:NP_509634]F15G9.2 [Source:RefSeq_peptide;Acc:NP_509634] BY ORTHOLOGY TO:F15G9.2
16.2107 -23.89 0.0122762 1300 2 1 2 [+] picture button
CBG19383 ENSCBRT00000013565 Seven TM Receptor family member (str-2) [Source:RefSeq_peptide;Acc:NP_741602]Seven TM Receptor family member (str-2) [Source:RefSeq_peptide;Acc:NP_741602] BY ORTHOLOGY TO:C50C10.7
16.2069 -23.91 0.012325 1300 4 1 4 [+] picture button
CBG15978 ENSCBRT00000014238 Guanylyl CYclase family member (gcy-11) [Source:RefSeq_peptide;Acc:NP_510755]Guanylyl CYclase family member (gcy-11) [Source:RefSeq_peptide;Acc:NP_510755] BY ORTHOLOGY TO:C30G4.3
16.1775 -18.77 0.0127175 1300 4 1 6 [+] picture button
CBG20862 ENSCBRT00000000678 DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:RefSeq_peptide;Acc:NP_956318]DEAH (Asp-Glu-Ala-His) box polypeptide 16 [Source:RefSeq_peptide;Acc:NP_956318] BY ORTHOLOGY TO:ENSDART00000006288
16.1484 -22.06 0.0131178 1300 3 1 3 [+] picture button
CBG14631 ENSCBRT00000003208 Serpentine Receptor, class U family member (sru-48) [Source:RefSeq_peptide;Acc:NP_508881]Serpentine Receptor, class U family member (sru-48) [Source:RefSeq_peptide;Acc:NP_508881] BY ORTHOLOGY TO:T03G11.2
16.1329 -18.03 0.0133356 1300 6 1 6 [+] picture button
CBG09447 ENSCBRT00000006429 Serpentine Receptor, class R family member (srr-1) [Source:RefSeq_peptide;Acc:NP_506262]Serpentine Receptor, class R family member (srr-1) [Source:RefSeq_peptide;Acc:NP_506262] BY ORTHOLOGY TO:W07G4.6
16.097 -22.45 0.0138548 1300 6 1 6 [+] picture button
CBG24237 ENSCBRT00000006256 CG7671-PA [Source:RefSeq_peptide;Acc:NP_650716]CG7671-PA [Source:RefSeq_peptide;Acc:NP_650716] BY ORTHOLOGY TO:CG7671-RA
16.0824 -21.83 0.014072 1300 2 1 2 [+] picture button
CBG12982 ENSCBRT00000012928 Uncharacterized protein B0495.8. [Source:Uniprot/SWISSPROT;Acc:Q09217]Uncharacterized protein B0495.8. [Source:Uniprot/SWISSPROT;Acc:Q09217] BY ORTHOLOGY TO:B0495.8a
15.9826 -21.5 0.0156466 1300 3 1 4 [+] picture button
CBG08345 ENSCBRT00000012940 C02F4.4 [Source:RefSeq_peptide;Acc:NP_501941]C02F4.4 [Source:RefSeq_peptide;Acc:NP_501941] BY ORTHOLOGY TO:C02F4.4
15.9612 -25.08 0.0160053 1300 3 2 4 [+] picture button
CBG00919 ENSCBRT00000003934 C01G6.3 [Source:RefSeq_peptide;Acc:NP_495975]C01G6.3 [Source:RefSeq_peptide;Acc:NP_495975] BY ORTHOLOGY TO:C01G6.3
15.9275 -29.14 0.0165887 1300 3 1 3 [+] picture button
CBG05151 ENSCBRT00000010318 Leukocyte receptor cluster member 1. [Source:Uniprot/SWISSPROT;Acc:Q96BZ8]Leukocyte receptor cluster member 1. [Source:Uniprot/SWISSPROT;Acc:Q96BZ8] BY ORTHOLOGY TO:ENSMMUT00000013547
15.925 -16.77 0.0166323 1300 7 1 10 [+] picture button

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