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Target Listing


Download table: GFF TXT

Highlighted rows in the table indicate genes with published known targets

All miRNA hits for Caenorhabditis briggsae and cbr-miR-244

134 hits found.


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Gene Name Transcript Description GO Terms Score Energy P-value Length Total Sites No. Cons Species No. miRNAs
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CBG15334 ENSCBRT00000009565 C06E1.9 [Source:RefSeq_peptide;Acc:NP_498894]C06E1.9 [Source:RefSeq_peptide;Acc:NP_498894] BY ORTHOLOGY TO:C06E1.9
17.8293 -20.43 5.41314e-05 1300 7 2 8 [+] picture button
CBG24185 ENSCBRT00000004377 K02F3.8 [Source:RefSeq_peptide;Acc:NP_497271]K02F3.8 [Source:RefSeq_peptide;Acc:NP_497271] BY ORTHOLOGY TO:K02F3.8
16.7342 -19.19 0.000952313 1300 5 1 4 [+] picture button
CBG15356 ENSCBRT00000010176 spe-9 encodes a predicted plasma membrane protein with a short intracellular domain and external EGF-like repeats most closely resembling those of the Delta, Serrate, APX-1, and LAG-2 signaling ligands. SPE-9 is required autonomously in sperm for fertilization, and by homology, likely mediates an adhesive or signaling event necessary for proper oocyte fertilization. spe-9 mRNA is detected solely in animals that are engaged in spermatogenesis. the receptor for SPE-9 is not yet known. [Source: WormBase]spe-9 encodes a predicted plasma membrane protein with a short intracellular domain and external EGF-like repeats most closely resembling those of the Delta, Serrate, APX-1, and LAG-2 signaling ligands. SPE-9 is required autonomously in sperm for fertilization, and by homology, likely mediates an adhesive or signaling event necessary for proper oocyte fertilization. spe-9 mRNA is detected solely in animals that are engaged in spermatogenesis. the receptor for SPE-9 is not yet known. [Source: WormBase] BY ORTHOLOGY TO:C17D12.6
15.7954 -17.25 0.0014213 1300 3 1 2 [+] picture button
CBG15350 ENSCBRT00000009556 B0361.9 [Source:RefSeq_peptide;Acc:NP_498608]B0361.9 [Source:RefSeq_peptide;Acc:NP_498608] BY ORTHOLOGY TO:B0361.9
18.4893 -25.28 0.00184378 1300 5 1 8 [+] picture button
CBG04522 ENSCBRT00000008790 tag-118/F13E6.6 is orthologous to the human gene RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 12 (ARHGEF12. OMIM:604763), which, when fused to the MLL gene (OMIM:159555), leads to primary acute myeloid leukemia. [Source: WormBase]tag-118/F13E6.6 is orthologous to the human gene RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 12 (ARHGEF12. OMIM:604763), which, when fused to the MLL gene (OMIM:159555), leads to primary acute myeloid leukemia. [Source: WormBase] BY ORTHOLOGY TO:F13E6.6
17.3394 -23.75 0.00186105 1300 5 1 4 [+] picture button
CBG09978 ENSCBRT00000008129 Vacuolar protein sorting-associated protein 53 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5VIR6]Vacuolar protein sorting-associated protein 53 homolog. [Source:Uniprot/SWISSPROT;Acc:Q5VIR6] BY ORTHOLOGY TO:ENSMMUT00000004311
15.9448 -18 0.00194861 1300 5 1 5 [+] picture button
CBG09639 ENSCBRT00000005809 F32G8.4 [Source:RefSeq_peptide;Acc:NP_505708]F32G8.4 [Source:RefSeq_peptide;Acc:NP_505708] BY ORTHOLOGY TO:F32G8.4
15.9544 -18.05 0.00204716 1300 6 2 6 [+] picture button
CBG02372 ENSCBRT00000006653 Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1). [Source:Uniprot/SWISSPROT;Acc:Q10038]Tyrosine-protein phosphatase vhp-1 (EC 3.1.3.48) (Vh1 dual specificity phosphatase family protein 1). [Source:Uniprot/SWISSPROT;Acc:Q10038] BY ORTHOLOGY TO:F08B1.1b
18.2058 -25.51 0.00263708 1300 3 1 3 [+] picture button
ENSCBRT00000001791 ZK355.4 [Source:RefSeq_peptide;Acc:NP_494402]ZK355.4 [Source:RefSeq_peptide;Acc:NP_494402] BY ORTHOLOGY TO:ZK355.4
16.435 -20.63 0.00289733 1300 1 1 1 [+] picture button
CBG13502 ENSCBRT00000009374 NOT ANNOTATED
18.0816 -33.61 0.00308435 1300 5 1 5 [+] picture button
CBG22705 ENSCBRT00000004268 C17H11.1 [Source:RefSeq_peptide;Acc:NP_509379]C17H11.1 [Source:RefSeq_peptide;Acc:NP_509379] BY ORTHOLOGY TO:C17H11.1
16.2752 -20.86 0.00361891 1300 4 1 3 [+] picture button
CBG12432 ENSCBRT00000013170 F56D5.2 [Source:RefSeq_peptide;Acc:NP_501656]F56D5.2 [Source:RefSeq_peptide;Acc:NP_501656] BY ORTHOLOGY TO:F56D5.2
16.5547 -16.91 0.00376724 1300 5 1 5 [+] picture button
CBG00779 ENSCBRT00000004026 T28A11.16 [Source:RefSeq_peptide;Acc:NP_503895]T28A11.16 [Source:RefSeq_peptide;Acc:NP_503895] BY ORTHOLOGY TO:T28A11.16
17.8853 -15.8 0.00395029 1300 4 1 14 [+] picture button
CBG21689 ENSCBRT00000004594 Uncharacterized protein C18orf58. [Source:Uniprot/SPTREMBL;Acc:Q8NAR6]Uncharacterized protein C18orf58. [Source:Uniprot/SPTREMBL;Acc:Q8NAR6] BY ORTHOLOGY TO:ENSOANT00000030399
16.6652 -17.13 0.00451291 1300 5 1 3 [+] picture button
CBG01881 ENSCBRT00000005708 potassium channel-interacting protein KChIP [Source:RefSeq_peptide;Acc:NP_001027949]potassium channel-interacting protein KChIP [Source:RefSeq_peptide;Acc:NP_001027949] BY ORTHOLOGY TO:ENSCINT00000018684
16.5642 -17.59 0.00463266 1300 5 1 4 [+] picture button
CBG02430 ENSCBRT00000006560 C27D8.1 [Source:RefSeq_peptide;Acc:NP_502428]C27D8.1 [Source:RefSeq_peptide;Acc:NP_502428] BY ORTHOLOGY TO:C27D8.1
16.6254 -19.33 0.00530776 1300 5 1 7 [+] picture button
CBG19038 ENSCBRT00000014063 Spectrin beta chain. [Source:Uniprot/SWISSPROT;Acc:Q00963]Spectrin beta chain. [Source:Uniprot/SWISSPROT;Acc:Q00963] BY ORTHOLOGY TO:CG5870-RA
16.6794 -18.79 0.00576245 1300 4 2 4 [+] picture button
CBG04441 ENSCBRT00000008931 C43F9.5 [Source:RefSeq_peptide;Acc:NP_501957]C43F9.5 [Source:RefSeq_peptide;Acc:NP_501957] BY ORTHOLOGY TO:C43F9.5
17.5292 -19.82 0.00618491 1300 5 2 7 [+] picture button
CBG10557 ENSCBRT00000007770 C23H5.8b [Source:RefSeq_peptide;Acc:NP_500164]C23H5.8b [Source:RefSeq_peptide;Acc:NP_500164] BY ORTHOLOGY TO:C23H5.8a
17.3422 -26.93 0.00782363 1300 3 1 3 [+] picture button
ENSCBRT00000000276 T25D1.2 [Source:RefSeq_peptide;Acc:NP_510678]T25D1.2 [Source:RefSeq_peptide;Acc:NP_510678] BY ORTHOLOGY TO:T25D1.2
17.3306 -15.96 0.00793758 1300 8 1 12 [+] picture button
CBG00997 ENSCBRT00000002154 Protein FRA10AC1. [Source:Uniprot/SWISSPROT;Acc:Q70Z53]Protein FRA10AC1. [Source:Uniprot/SWISSPROT;Acc:Q70Z53] BY ORTHOLOGY TO:SINFRUT00000140472
17.3229 -22.2 0.00801546 1300 2 1 2 [+] picture button
CBG12454 ENSCBRT00000013185 MGC88947 protein. [Source:Uniprot/SPTREMBL;Acc:Q6DF58]MGC88947 protein. [Source:Uniprot/SPTREMBL;Acc:Q6DF58] BY ORTHOLOGY TO:ENSXETT00000009779
17.3198 -23.78 0.00804625 1300 3 1 3 [+] picture button
CBG07667 ENSCBRT00000010615 T10B10.5 [Source:RefSeq_peptide;Acc:NP_510526]T10B10.5 [Source:RefSeq_peptide;Acc:NP_510526] BY ORTHOLOGY TO:T10B10.5
17.2977 -17.88 0.00827211 1300 2 2 2 [+] picture button
CBG10096 ENSCBRT00000007226 T26G10.5 [Source:RefSeq_peptide;Acc:NP_499072]T26G10.5 [Source:RefSeq_peptide;Acc:NP_499072] BY ORTHOLOGY TO:T26G10.5
15.3194 -18.3 0.00853061 1300 2 1 2 [+] picture button
CBG10982 ENSCBRT00000001211 laminin gamma 1 chainlaminin gamma 1 chain BY ORTHOLOGY TO:AAEL005187-RA
17.1856 -15.29 0.00952079 1300 2 2 2 [+] picture button
CBG23329 ENSCBRT00000011453 Intraflagellar transport 52 homolog (Protein NGD5 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y366]Intraflagellar transport 52 homolog (Protein NGD5 homolog). [Source:Uniprot/SWISSPROT;Acc:Q9Y366] BY ORTHOLOGY TO:ENSORLT00000014622
15.38 -14.82 0.00989736 1300 4 1 4 [+] picture button
CBG10565 ENSCBRT00000007765 Y69A2AR.32a [Source:RefSeq_peptide;Acc:NP_741340]Y69A2AR.32a [Source:RefSeq_peptide;Acc:NP_741340] BY ORTHOLOGY TO:Y69A2AR.32a
17.1529 -23.37 0.00991968 1300 4 1 3 [+] picture button
CBG09382 ENSCBRT00000006399 NACHT and WD repeat domain containing 1 [Source:RefSeq_peptide;Acc:NP_001007526]NACHT and WD repeat domain containing 1 [Source:RefSeq_peptide;Acc:NP_001007526] BY ORTHOLOGY TO:ENSMMUT00000026018
17.1147 -17.3 0.0104056 1300 3 1 3 [+] picture button
CBG08608 ENSCBRT00000002981 R04B5.1 [Source:RefSeq_peptide;Acc:NP_505587]R04B5.1 [Source:RefSeq_peptide;Acc:NP_505587] BY ORTHOLOGY TO:R04B5.1
17.1045 -20.14 0.0105395 1300 4 2 4 [+] picture button
CBG06810 ENSCBRT00000007439 Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (MCCase subunit beta) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta) (3- methylcrotonyl-CoA carboxylase non-biotin-containing [Source:Uniprot/SWISSPROT;Acc:Q9HCC0]Methylcrotonoyl-CoA carboxylase beta chain, mitochondrial precursor (EC 6.4.1.4) (3-methylcrotonyl-CoA carboxylase 2) (MCCase subunit beta) (3-methylcrotonyl-CoA:carbon dioxide ligase subunit beta) (3- methylcrotonyl-CoA carboxylase non-biotin-containing [Source:Uniprot/SWISSPROT;Acc:Q9HCC0] BY ORTHOLOGY TO:ENSMMUT00000021284
17.045 -23.03 0.0113538 1300 4 1 4 [+] picture button
CBG15997 ENSCBRT00000014249 F53H4.3 [Source:RefSeq_peptide;Acc:NP_510611]F53H4.3 [Source:RefSeq_peptide;Acc:NP_510611] BY ORTHOLOGY TO:F53H4.3
17.018 -19.92 0.0117438 1300 1 1 1 [+] picture button
CBG05708 ENSCBRT00000009195 Serpentine Receptor, class X family member (srx-19) [Source:RefSeq_peptide;Acc:NP_501057]Serpentine Receptor, class X family member (srx-19) [Source:RefSeq_peptide;Acc:NP_501057] BY ORTHOLOGY TO:T05A12.1
17.0078 -19.56 0.0118938 1300 5 1 5 [+] picture button
CBG01283 ENSCBRT00000005156 Serpentine Receptor, class X family member (srx-68) [Source:RefSeq_peptide;Acc:NP_504082]Serpentine Receptor, class X family member (srx-68) [Source:RefSeq_peptide;Acc:NP_504082] BY ORTHOLOGY TO:K07C6.11
15.6017 -10.91 0.0133228 1300 4 2 3 [+] picture button
CBG03432 ENSCBRT00000007191 F44D12.2 [Source:RefSeq_peptide;Acc:NP_501806]F44D12.2 [Source:RefSeq_peptide;Acc:NP_501806] BY ORTHOLOGY TO:F44D12.2
16.9112 -16.46 0.0134198 1300 4 1 7 [+] picture button
CBG09230 ENSCBRT00000001842 C31H1.1 [Source:RefSeq_peptide;Acc:NP_500865]C31H1.1 [Source:RefSeq_peptide;Acc:NP_500865] BY ORTHOLOGY TO:C31H1.1
16.8759 -17.58 0.0140237 1300 3 1 3 [+] picture button
CBG20699 ENSCBRT00000001494 Nuclear Hormone Receptor family member (nhr-70) [Source:RefSeq_peptide;Acc:NP_507636]Nuclear Hormone Receptor family member (nhr-70) [Source:RefSeq_peptide;Acc:NP_507636] BY ORTHOLOGY TO:Y51A2D.17
16.8694 -13.56 0.0141389 1300 6 1 6 [+] picture button
CBG17889 ENSCBRT00000000437 R09A1.3 [Source:RefSeq_peptide;Acc:NP_503364]R09A1.3 [Source:RefSeq_peptide;Acc:NP_503364] BY ORTHOLOGY TO:R09A1.3
16.8393 -20.72 0.014679 1300 2 1 2 [+] picture button
CBG18156 ENSCBRT00000003357 Putative DNA topoisomerase II, mitochondrial precursor (EC 5.99.1.3). [Source:Uniprot/SWISSPROT;Acc:P34534]Putative DNA topoisomerase II, mitochondrial precursor (EC 5.99.1.3). [Source:Uniprot/SWISSPROT;Acc:P34534] BY ORTHOLOGY TO:R05D3.1
16.7737 -16.29 0.0159282 1300 2 1 2 [+] picture button
CBG06707 ENSCBRT00000009719 H04M03.1 [Source:RefSeq_peptide;Acc:NP_500887]H04M03.1 [Source:RefSeq_peptide;Acc:NP_500887] BY ORTHOLOGY TO:H04M03.1
16.7427 -18.52 0.0165549 1300 5 1 4 [+] picture button
CBG01400 ENSCBRT00000002359 F59B1.10 [Source:RefSeq_peptide;Acc:NP_872223]F59B1.10 [Source:RefSeq_peptide;Acc:NP_872223] BY ORTHOLOGY TO:F59B1.10
16.6897 -18.29 0.017683 1300 3 1 3 [+] picture button
CBG10957 ENSCBRT00000001236 R173.3 [Source:RefSeq_peptide;Acc:NP_509187]R173.3 [Source:RefSeq_peptide;Acc:NP_509187] BY ORTHOLOGY TO:R173.3
16.6704 -25.16 0.0181134 1300 3 1 3 [+] picture button
CBG24559 ENSCBRT00000012665 hypothetical proteinhypothetical protein BY ORTHOLOGY TO:AAEL005128-RA
16.6492 -23.23 0.0185948 1300 3 1 7 [+] picture button
CBG19837 ENSCBRT00000002401 Serpentine Receptor, class V family member (srv-19) [Source:RefSeq_peptide;Acc:NP_500878]Serpentine Receptor, class V family member (srv-19) [Source:RefSeq_peptide;Acc:NP_500878] BY ORTHOLOGY TO:H04M03.6
16.6307 -15.52 0.0190287 1300 9 1 8 [+] picture button
CBG11639 ENSCBRT00000011428 Seven TM Receptor family member (str-161) [Source:RefSeq_peptide;Acc:NP_500668]Seven TM Receptor family member (str-161) [Source:RefSeq_peptide;Acc:NP_500668] BY ORTHOLOGY TO:T08B6.3
16.5974 -14.78 0.0198299 1300 4 1 4 [+] picture button
CBG14306 ENSCBRT00000002735 F47F2.3 [Source:RefSeq_peptide;Acc:NP_508673]F47F2.3 [Source:RefSeq_peptide;Acc:NP_508673] BY ORTHOLOGY TO:F47F2.3
16.594 -19.34 0.0199145 1300 3 1 3 [+] picture button
CBG24474 ENSCBRT00000010866 H23L24.4 [Source:RefSeq_peptide;Acc:NP_501495]H23L24.4 [Source:RefSeq_peptide;Acc:NP_501495] BY ORTHOLOGY TO:H23L24.4
16.5929 -16.88 0.0199422 1300 4 2 5 [+] picture button
CBG02863 ENSCBRT00000006200 This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. [Source: WormBase]This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins. [Source: WormBase] BY ORTHOLOGY TO:F54D5.9
16.5482 -18.02 0.0210767 1300 2 1 2 [+] picture button
CBG03086 ENSCBRT00000006989 F59B10.2 [Source:RefSeq_peptide;Acc:NP_496263]F59B10.2 [Source:RefSeq_peptide;Acc:NP_496263] BY ORTHOLOGY TO:F59B10.2
16.5445 -24.31 0.0211747 1300 2 1 2 [+] picture button
CBG23369 ENSCBRT00000011480 R07B7.6 [Source:RefSeq_peptide;Acc:NP_506027]R07B7.6 [Source:RefSeq_peptide;Acc:NP_506027] BY ORTHOLOGY TO:R07B7.6
16.5247 -17.97 0.0217001 1300 2 1 3 [+] picture button
CBG24379 ENSCBRT00000009375 C32H11.3 [Source:RefSeq_peptide;Acc:NP_502465]C32H11.3 [Source:RefSeq_peptide;Acc:NP_502465] BY ORTHOLOGY TO:C32H11.3
16.5247 -22.6 0.0217001 1300 2 1 2 [+] picture button

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Download table: GFF TXT
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