ID   Y11023; SV 2; linear; genomic DNA; STD; VRL; 2561 BP.
XX
AC   Y11023;
XX
DT   28-JUL-1997 (Rel. 52, Created)
DT   14-NOV-2006 (Rel. 89, Last updated, Version 5)
XX
DE   Bean yellow dwarf virus putative genes V1, V2, C1, C1:C2
XX
KW   c1 gene; C1:C2 gene; coat protein; replication-associated protein; V1 gene;
KW   V2 gene.
XX
OS   Bean yellow dwarf virus
OC   Viruses; ssDNA viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RX   PUBMED; 9267015.
RA   Liu L., van Tonder T., Pietersen G., Davies J.W., Stanley J.;
RT   "Molecular characterization of a subgroup I geminivirus from a legume";
RL   J. Gen. Virol. 78:2113-2117(1997).
XX
RN   [2]
RC   revised by [3]
RA   Stanley J.;
RT   ;
RL   Submitted (04-FEB-1997) to the INSDC.
RL   J. Stanley, John Innes Institute, Norwich Research Park, Colney, Norwich,
RL   NR4 7UH, UK
XX
RN   [3]
RP   1-2561
RA   Stanley J.;
RT   ;
RL   Submitted (03-DEC-2003) to the INSDC.
RL   J. Stanley, John Innes Institute, Norwich Research Park, Colney, Norwich,
RL   NR4 7UH, UK
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2561
FT                   /organism="Bean yellow dwarf virus"
FT                   /host="Phaseolus vulgaris"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:57119"
FT   CDS             129..407
FT                   /gene="V1"
FT                   /db_xref="GOA:O39519"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/Swiss-Prot:O39519"
FT                   /protein_id="CAA71905.1"
FT                   /translation="MERILYQVFPSDTNYSYDPPAVTAPSQGSSQTDFGKVVIALVVIL
FT                   VSVGVFYLAYTLFLKDCILLFKAKKQRTTTEIGFGQTPARNQDHPGP"
FT   CDS             420..1157
FT                   /gene="V2"
FT                   /product="coat protein"
FT                   /db_xref="GOA:O39520"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/Swiss-Prot:O39520"
FT                   /protein_id="CAA71906.1"
FT                   /translation="MSTVTWGKKRKRSGGDSKAKSRGSSSYIPRSVSSRRESLQVATFS
FT                   WTSSGSGIKFSPGGAAYLVSNFPQGANDNCRHTNKTVLYKFMAKNTIYLDSSHYMKVFR
FT                   APFHFWLVYDKSPGANVPSTGDIFEGPSLFPHNPWTWTVSRAACHRFVVKKTWSCVVES
FT                   NGIDPTKGQGATYYGPGPCNQVKSCNKFFKRLGVSTEWKNSATGDVGDIKEGALYIVGA
FT                   PSQKSDVYVNGYFRVYFKSVGNQ"
FT   CDS             complement(1520..2398)
FT                   /gene="C1"
FT                   /db_xref="GOA:O39521"
FT                   /db_xref="HSSP:1L5I"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/Swiss-Prot:O39521"
FT                   /protein_id="CAA71907.1"
FT                   /translation="MPSASKNFRLQSKYVFLTYPKCSSQRDDLFQFLWEKLTPFLIFFL
FT                   GVASELHQDGTTHYHALIQLDKKPCIRDPSFFDFEGNHPNIQPARNSKQVLDYISKDGD
FT                   IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWATKLQWLEYSANK
FT                   LFPPQPEQYVSPFTESDLRCHEDLHNWRETHLYHVSIDAYTFIHPVSYDQAQSDLEWMA
FT                   DLTRMREGLGSDTPASTSADQLVPERPPGLEVSGDTTTGTGPSTSPTTMNTPPIISSTT
FT                   SPSSSSHCGSN"
FT   CDS             complement(join(1308..1721,1808..2398))
FT                   /gene="C1:C2"
FT                   /product="replication-associated protein"
FT                   /db_xref="GOA:O39522"
FT                   /db_xref="HSSP:1L5I"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR001301"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/Swiss-Prot:O39522"
FT                   /protein_id="CAA71908.2"
FT                   /translation="MPSASKNFRLQSKYVFLTYPKCSSQRDDLFQFLWEKLTPFLIFFL
FT                   GVASELHQDGTTHYHALIQLDKKPCIRDPSFFDFEGNHPNIQPARNSKQVLDYISKDGD
FT                   IKTRGDFRDHKVSPRKSDARWRTIIQTATSKEEYLDMIKEEFPHEWATKLQWLEYSANK
FT                   LFPPQPEQYVSPFTESDLRCHEDLHNWRETHLYHDEGRTGVRHPSLYICGPTRTGKTTW
FT                   ARSLGRHNYWNGTIDFTNYDEHATYNIIDDIPFKFVPLWKQLIGCQSDFTVNPKYGKKK
FT                   KIKGGIPSIILCNPDEDWMLSMTSQQKDYFEDNCVTHYMCDGETFFARESSSH"
FT   intron          complement(1722..1807)
FT                   /number=1
FT   exon            complement(1808..2398)
FT                   /number=1
FT   exon            complement(1308..1721)
FT                   /number=2
XX
SQ   Sequence 2561 BP; 684 A; 497 C; 635 G; 745 T; 0 other;
     accggcgtgg ccccacctta tcgcgagtgc tttagcacga gcggtccaga tttaaagtag        60
     aaaagttccc gcccactagg gttaaaggtg ttcacactat aaaagcatat acgatgtgat       120
     ggtatttgat ggagcgtata ttgtatcagg tatttccgtc ggatacgaat tattcgtacg       180
     accctcctgc agtaactgct ccttcacagg gttcatctca aacggatttc ggtaaggttg       240
     ttattgcttt ggtggttatc ttggtcagcg taggtgtttt ctatctggcc tataccttgt       300
     tcttgaagga ctgcatcctt ctgttcaagg cgaagaagca gagaaccaca accgaaatcg       360
     ggtttggaca aaccccggct agaaatcagg atcatccagg accgtaggcg gggtgcatca       420
     tgtctactgt gacatggggt aagaagcgga agcgaagcgg aggggattct aaggcgaaga       480
     gtaggggctc cagttcctat attccaagat ctgtttcctc caggagagaa tcgttgcagg       540
     ttgctacctt ttcctggacg agttccggtt cgggtataaa gttctctccc ggtggtgctg       600
     cttatcttgt gagcaatttt ccacagggtg ccaacgataa ttgtcgtcac accaacaaga       660
     ccgtgttata caaattcatg gccaagaata ctatatactt ggactctagt cactatatga       720
     aagtgtttag agctccattt catttttggc tggtgtacga caagtctcct ggtgctaatg       780
     ttcccagtac tggggatata tttgagggac cttcgttgtt tcctcataat ccttggacgt       840
     ggactgtgtc tagggctgct tgccatcgtt ttgtggtgaa gaaaacgtgg tcatgcgtgg       900
     tggagagcaa tggtattgac ccaaccaaag gtcaaggagc tacttattat gggcctgggc       960
     cttgtaatca ggttaagtcc tgtaataagt tctttaagag attgggtgtg tccacagagt      1020
     ggaaaaatag tgcaacgggt gatgttggtg atataaagga aggagccctt tacattgttg      1080
     gtgctccttc ccaaaagtcc gatgtatatg taaatggtta tttccgagtg tacttcaagt      1140
     cagttggaaa tcaataaaat gattatttta tgaatatatt tcattgtgca agtagataga      1200
     aattacatat gttacataac acacgaaata aacaaaaaaa cacaatccaa aacaaacacc      1260
     ccaaacaaaa taacactata tatatcctcg tatgaggaga ggcacgttca gtgactcgac      1320
     gattcccgag caaaaaaagt ctccccgtca cacatatagt gggtgacgca attatcttca      1380
     aagtaatcct tctgttgact tgtcattgat aacatccagt cttcgtcagg attgcaaaga      1440
     attatagaag ggatcccacc ttttattttc ttcttttttc catatttagg gttgacagtg      1500
     aaatcagact ggcaacctat taattgcttc cacaatggga cgaacttgaa ggggatgtcg      1560
     tcgatgatat tataggtggc gtgttcatcg tagttggtga agtcgatggt cccgttccag      1620
     tagttgtgtc gcccgagact tctagcccag gtggtctttc cggtacgagt tggtccgcag      1680
     atgtagaggc tggggtgtct gaccccagtc cttccctcat cctggttaga tcggccatcc      1740
     actcaaggtc agattgtgct tgatcgtagg agacaggatg tatgaaagtg taggcatcga      1800
     tgcttacatg atataggtgc gtctctctcc agttgtgcag atcttcgtgg cagcggagat      1860
     ctgattctgt gaagggcgac acgtactgct caggttgtgg aggaaataat ttgttggctg      1920
     aatattccag ccattgaagc tttgttgccc attcatgagg gaattcttct ttgatcatgt      1980
     caagatactc ctccttagac gttgcagtct ggataatagt tcgccatcgt gcgtcagatt      2040
     tgcgaggaga gaccttatga tctcggaaat ctcctctggt tttaatatct ccgtcctttg      2100
     atatgtaatc aaggacttgt ttagagtttc tagctggctg gatattaggg tgatttcctt      2160
     caaaatcgaa aaaagaagga tccctaatac aaggtttttt atcaagctgg ataagagcat      2220
     gatagtgggt agtgccatct tgatgaagct cagaagcaac accaaggaag aaaataagaa      2280
     aaggtgtgag tttctcccag agaaactgga ataaatcatc tctttgagat gagcacttgg      2340
     ggtaggtaag gaaaacatat ttagattgga gtctgaagtt cttgctagca gaaggcatgt      2400
     tgttgtgact ccgaggggtt gcctcaaact ctatcttata accggcgtgg aggcatggag      2460
     gcaagggcat tttggtaatt taagtagtta gtggaaaatg acgtcattta cttaaagacg      2520
     aagtcttgcg acaagggggg cccacgccga attttaatat t                          2561
//