ID V01108; SV 1; circular; genomic DNA; STD; VRL; 5153 BP. XX AC V01108; J02038; XX DT 03-NOV-1982 (Rel. 02, Created) DT 18-APR-2005 (Rel. 83, Last updated, Version 6) XX DE Human BK virus (strain Dunlop) genome. (Closely related to SV40.) XX KW circular; genome. XX OS BK polyomavirus OC Viruses; dsDNA viruses, no RNA stage; Polyomaviridae; Polyomavirus. XX RN [1] RP 1-5153 RX DOI; 10.1016/0092-8674(79)90209-5. RX PUBMED; 229976. RA Seif I., Khoury G., Dhar R.; RT "The genome of human papovavirus BKV"; RL Cell 18(4):963-977(1979). XX RN [2] RP 1-2160 RA Seif I., Khoury G., Dhar R.; RT "Errata"; RL Cell 19:567-567(1980). XX DR EPD; EP11213; BKV_TA. XX CC This entry was previously named . CC CC The sequence is listed starting at the translation initiation CC codon common to the large T and small t antigens, in the polarity CC of the late mRNAs. XX FH Key Location/Qualifiers FH FT source 1..5153 FT /organism="BK polyomavirus" FT /mol_type="genomic DNA" FT /db_xref="taxon:10629" FT rep_origin 97..119 FT /note="origin of replication" FT CDS 388..588 FT /product="putative VPx (agnogene)" FT /db_xref="GOA:P03085" FT /db_xref="InterPro:IPR002643" FT /db_xref="UniProtKB/Swiss-Prot:P03085" FT /protein_id="CAA24296.1" FT /translation="MVLRQLSRQASVKVGKTWTGTKKRAQRIFIFILELLLEFCRGEDS FT VDGKNKSTTALPAVKDSVKDS" FT CDS 624..1679 FT /note="VP2" FT /db_xref="GOA:P03094" FT /db_xref="InterPro:IPR001070" FT /db_xref="UniProtKB/Swiss-Prot:P03094" FT /protein_id="CAA24297.1" FT /translation="MGAALALLGDLVASVSEAAAATGFSVAEIAAGEAAAAIEVQIASL FT ATVEGITSTSEAIAAIGLTPQTYAVIAGAPGAIAGFAALIQTVSGISSLAQVGYKFFDD FT WDHKVSTVGLYQQSGMALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQ FT ALWHVIRDDIPSITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQQYYSDL FT SPIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQSVHSGEFIEKTIA FT PGGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQKKRRVSRGSSQKAKGTRASAKT FT TNKRRSRSSRS" FT CDS 981..1679 FT /note="VP3" FT /db_xref="GOA:Q84180" FT /db_xref="InterPro:IPR001070" FT /db_xref="UniProtKB/TrEMBL:Q84180" FT /protein_id="CAA24298.1" FT /translation="MALELFNPDEYYDILFPGVNTFVNNIQYLDPRHWGPSLFATISQA FT LWHVIRDDIPSITSQELQRRTERFFRDSLARFLEETTWTIVNAPINFYNYIQQYYSDLS FT PIRPSMVRQVAEREGTRVHFGHTYSIDDADSIEEVTQRMDLRNQQSVHSGEFIEKTIAP FT GGANQRTAPQWMLPLLLGLYGTVTPALEAYEDGPNQKKRRVSRGSSQKAKGTRASAKTT FT NKRRSRSSRS" FT CDS 1564..2652 FT /note="VP1" FT /db_xref="GOA:P03088" FT /db_xref="InterPro:IPR000662" FT /db_xref="InterPro:IPR011222" FT /db_xref="UniProtKB/Swiss-Prot:P03088" FT /protein_id="CAA24299.1" FT /translation="MAPTKRKGECPGAAPKKPKEPVQVPKLLIKGGVEVLEVKTGVDAI FT TEVECFLNPEMGDPDENLRGFSLKLSAENDFSSDSPERKMLPCYSTARIPLPNLNEDLT FT CGNLLMWEAVTVQTEVIGITSMLNLHAGSQKVHEHGGGKPIQGSNFHFFAVGGEPLEMQ FT GVLMNYRSKYPDGTITPKNPTAQSQVMNTDHKAYLDKNNAYPVECWVPDPSRNENARYF FT GTFTGGENVPPVLHVTNTATTVLLDEQGVGPLCKADSLYVSAADICGLFTNSSGTQQWR FT GLARYFKIRLRKRSVKNPYPISFLLSDLINRRTQRVDGQPMYGMESQVEEVRVFDGTER FT LPGDPDMIRYIDKQGQLQTKML" FT CDS complement(join(2722..4566,4911..5153)) FT /product="large T antigen" FT /db_xref="GOA:P03071" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR003133" FT /db_xref="InterPro:IPR010932" FT /db_xref="InterPro:IPR014015" FT /db_xref="InterPro:IPR016392" FT /db_xref="InterPro:IPR017910" FT /db_xref="UniProtKB/Swiss-Prot:P03071" FT /protein_id="CAA24300.1" FT /translation="MDKVLNREESMELMDLLGLERAAWGNLPLMRKAYLRKCKEFHPDK FT GGDEDKMKRMNTLYKKMEQDVKVAHQPDFGTWSSSEVPTYGTEEWESWWSSFNEKWDED FT LFCHEDMFASDEEATADSQHSTPPKKKRKVEDPKDFPSDLHQFLSQAVFSNRTLACFAV FT YTTKEKAQILYKKLMEKYSVTFISRHMCAGHNIIFFLTPHRHRVSAINNFCQKLCTFSF FT LICKGVNKEYLLYSALTRDPYHTIEESIQGGLKEHDFSPEEPEETKQVSWKLITEYAVE FT TKCEDVFLLLGMYLEFQYNVEECKKCQKKDQPYHFKYHEKHFANAIIFAESKNQKSICQ FT QAVDTVLAKKRVDTLHMTREEMLTERFNHILDKMDLIFGAHGNAVLEQYMAGVAWLHCL FT LPKMDSVIFDFLHCIVFNVPKRRYWLFKGPIDSGKTTLAAGLLDLCGGKALNVNLPMER FT LTFELGVAIDQYMVVFEDVKGTGAESKDLPSGHGINNLDSLRDYLDGSVKVNLEKKHLN FT KRTQIFPPGLVTMNEYPVPKTLQARFVRQIDFRPKIYLRKSLQNSEFLLEKRILQSGMT FT LLLLLIWFRPVADFATDIQSRIVEWKERLDSEISMYTFSRMKYNICMGKCILDITREED FT SETEDSGHGSSTESQSQCSSQVSDTSAPAEDSQRSDPHSQELHLCKGFQCFKRPKTPPP FT K" FT intron complement(4567..4910) FT /note="putative IVS for large T antigen" FT CDS complement(4635..5153) FT /product="small t antigen" FT /db_xref="GOA:P03082" FT /db_xref="InterPro:IPR001623" FT /db_xref="InterPro:IPR003354" FT /db_xref="UniProtKB/Swiss-Prot:P03082" FT /protein_id="CAA24301.1" FT /translation="MDKVLNREESMELMDLLGLERAAWGNLPLMRKAYLRKCKEFHPDK FT GGDEDKMKRMNTLYKKMEQDVKVAHQPDFGTWSSSEVCADFPLCPDTLYCKEWPICSKK FT PSVHCPCMLCQLRLRHLNRKFLRKEPLVWIDCYCIDCFTQWFGLDLTEETLQWWVQIIG FT ETPFRDLKL" XX SQ Sequence 5153 BP; 1546 A; 1024 C; 1013 G; 1570 T; 0 other; ttttgcaaaa attgcaaaag aatagggatt tccccaaata gttttgctag gcctcagaaa 60 aagcctccac acccttacta cttgagagaa agggtggagg cagaggcggc ctcggcctct 120 tatatattat aaaaaaaaag gccacaggga ggagctgctt acccatggaa tgcagccaaa 180 ccatgacctc aggaaggaaa gtgcatgact cacaggggaa tgcagccaaa ccatgacctc 240 aggaaggaaa gtgcatgact cacagggagg agctgcttac ccatggaatg cagccaaacc 300 atgacctcag gaaggaaagt gcatgacaga catgttttgc gagcctagga atcttggcct 360 tgtccccagt taaactggac aaaggccatg gttctgcgcc agctgtcacg acaagcttca 420 gtgaaagttg gtaaaacctg gactggaaca aaaaaaagag ctcagaggat ttttattttt 480 attttagagc ttttgctgga attttgtaga ggtgaagaca gtgtagacgg gaaaaacaaa 540 agtaccactg ctttacctgc tgtaaaagac tctgtaaaag actcctaggt aagtaatccc 600 tttttttttg tatttccagg ttcatgggtg ctgctctagc acttttgggg gacctagttg 660 ccagtgtatc tgaggctgct gctgccacag gattttcagt ggctgaaatt gctgctgggg 720 aggctgctgc tgctatagaa gttcaaattg catcccttgc tactgtagag ggcataacaa 780 gtacctcaga ggctatagct gctataggcc taactcctca aacatatgct gtaattgctg 840 gtgctcctgg ggctattgct gggtttgctg ctttaattca aactgttagt ggtattagtt 900 ccttagctca agtagggtat aagttctttg atgattggga tcacaaagtt tccactgtag 960 gcctctatca gcaatcaggc atggctttgg aattgtttaa cccagatgag tactatgata 1020 ttctgtttcc tggtgtaaat acttttgtta ataatattca ataccttgat cctaggcatt 1080 ggggtccttc tttgtttgct actatttccc aggctttgtg gcatgttatt agggatgata 1140 taccttctat aacctcacag gaattgcaga gaagaacaga aagatttttt agagactcct 1200 tggctagatt tttggaggaa actacctgga caattgtaaa tgcccctata aacttttata 1260 attatattca acaatattat tctgatcttt cccctattag gccctcaatg gttagacaag 1320 tagctgaaag ggaaggtacc cgtgtacatt ttggccatac ttatagtata gatgatgctg 1380 acagtataga agaagttaca caaagaatgg acttaagaaa tcaacaaagt gtacattcag 1440 gagagtttat agaaaaaact attgccccag gaggtgctaa tcaaagaact gctcctcaat 1500 ggatgttgcc tttacttcta ggcctgtacg ggactgtaac acctgctctt gaagcatatg 1560 aagatggccc caaccaaaag aaaaggagag tgtccagggg cagctcccaa aaagccaaag 1620 gaacccgtgc aagtgccaaa actactaata aaaggaggag tagaagttct agaagttaaa 1680 actggggtag atgctattac agaggtagaa tgcttcctaa acccagaaat gggggatcca 1740 gatgaaaacc ttaggggctt tagtctaaag ctaagtgctg aaaatgactt tagcagtgat 1800 agcccagaga gaaaaatgct tccctgttac agcacagcaa gaattcccct ccccaattta 1860 aatgaggacc taacctgtgg aaatctactg atgtgggagg ctgtaactgt acaaacagag 1920 gttattggaa taactagcat gcttaacctt catgcagggt cacaaaaagt gcatgagcat 1980 ggtggaggaa aacctattca aggcagtaat ttccacttct ttgctgtagg tggagaaccc 2040 ttggaaatgc agggagtgct aatgaattac aggtcaaagt accctgatgg tactataacc 2100 cctaaaaacc caacagccca gtcccaggta atgaatactg accataaggc ctatttggac 2160 aaaaacaatg cttatccagt tgagtgctgg gtacctgatc ccagtagaaa tgaaaatgct 2220 aggtattttg ggactttcac aggaggggaa aatgttcccc cagtacttca tgtgaccaac 2280 acagctacca cagtgttgct agatgaacag ggtgtggggc ctctttgtaa agctgatagc 2340 ctgtatgttt cagctgctga tatttgtggc ctgtttacta acagctctgg aacacaacag 2400 tggagaggcc ttgcaagata ttttaagatc cgcctgagaa aaagatctgt aaagaatcct 2460 tacccaattt cctttttgct aagtgacctt ataaacagga gaacccagag agtggatggg 2520 cagcctatgt atggtatgga atcccaggta gaagaggtta gggtgtttga tggcacagaa 2580 agacttccag gggacccaga tatgataaga tatattgaca aacagggaca attgcaaacc 2640 aaaatgcttt aaacaggtgc ttttattgta catatacatt taataaatgc tgcttttgta 2700 taagccactt ttaagcttgt gttattttgg gggtggtgtt ttaggccttt taaaacactg 2760 aaagccttta cacaaatgca actcttgact atgggggtct gacctttggg aatcttcagc 2820 aggggctgaa gtatctgaga cttgggaaga gcattgtgat tgggattcag tgcttgatcc 2880 atgtccagag tcttcagttt ctgaatcctc ttctcttgta atatcaagaa tacatttccc 2940 catgcatata ttatatttca tccttgaaaa agtatacata cttatctcag aatccagcct 3000 ttccttccat tcaacaattc tagattgtat atcagttgca aaatcagcta caggcctaaa 3060 ccaaattagc agtagcaaca aggtcattcc actttgtaaa attctttttt caagtaagaa 3120 ctctgagttt tgtaaggatt ttcttaaata tattttgggc ctaaaatcta tttgtcttac 3180 aaatctagct tgcagggttt tagggacagg atactcattc attgtaacca agcctggtgg 3240 aaatatttgg gttcttttgt ttaaatgttt cttttctaaa tttaccttaa cacttccatc 3300 taaataatct ctcaaactgt ctaaattgtt tattccatgt cctgaaggca aatcctttga 3360 ttcagctcct gtccctttta catcttcaaa aacaaccatg tactgatcta tagctacacc 3420 tagctcaaag gttagccttt ccatgggtag gtttacattt aaggctttac caccacacaa 3480 atctaataac cctgcagcta gtgttgtttt tccactatca atgggacctt taaataacca 3540 gtatcttctt ttaggtacat tgaaaacaat acagtgcaaa aaatcaaata ttacagaatc 3600 cattttaggt agcaaacagt gcagccaagc aacacctgcc atatattgtt ctagtacagc 3660 atttccatga gctccaaata ttaaatccat tttatctaat atatgattga atctttctgt 3720 tagcatttct tccctggtca tatgaagggt atctactctt tttttagcta aaactgtatc 3780 tactgcttgc tgacaaatac ttttttgatt tttactttct gcaaaaataa tagcatttgc 3840 aaagtgcttt tcatgatact taaagtgata aggctggtct tttttctgac actttttaca 3900 ctcctctaca ttgtattgaa attctaaata catacctaat aataaaaaca catcctcaca 3960 ctttgtctct actgcatact cagtaattaa tttccaagac acctgctttg tttcttcagg 4020 ctcttctggg ctaaaatcat gctcctttaa gcccccttga atgctttctt ctatagtatg 4080 gtatggatct ctagttaagg cactatatag taagtattcc ttattaacac ccttacaaat 4140 taaaaaacta aaggtacaca gcttttgaca gaaattatta attgcagaaa ctctatgtct 4200 atgtggagtt aaaaagaata taatattatg cccagcacac atgtgtctac taataaaagt 4260 tacagaatat ttttccataa gttttttata cagaatttga gctttttctt tagtagtata 4320 cacagcaaag caggcaaggg ttctattact aaatacagct tgactaagaa actggtgtag 4380 atcagaggga aagtctttag ggtcttctac ctttcttttt tttttgggtg gtgttgagtg 4440 ttgagaatct gctgttgctt cttcatcact ggcaaacata tcttcatggc aaaataaatc 4500 ttcatcccat ttttcattaa aggaactcca ccaggactcc cactcttctg ttccataggt 4560 tggcacctat aaaaaaaata attacttagg gccttttaat attttattat ttatctaaat 4620 ataagttagt taccttaaag ctttagatct ctgaagggag tttctccaat tatttggacc 4680 caccattgca gagtttcttc agttaggtct aagccaaacc actgtgtgaa gcagtcaatg 4740 cagtagcaat ctatccaaac caagggctct tttcttaaaa attttctatt taaatgcctt 4800 aatctaagct gacatagcat gcaagggcag tgcacagaag gctttttgga acaaataggc 4860 cattccttgc agtacagggt atctgggcaa agaggaaaat cagcacaaac ctctgagcta 4920 ctccaggttc caaaatcagg ctgatgagct acctttacat cctgctccat ttttttatac 4980 aaagtattca ttctcttcat tttatcctcg tcgccccctt tgtcagggtg aaattcctta 5040 cacttcctta aataagcttt tctcattaag ggaagatttc cccaggcagc tctttcaagg 5100 cctaaaaggt ccatgagctc catggattct tccctgttaa gaactttatc cat 5153 //