ID M19465; SV 1; circular; genomic DNA; STD; UNC; 4548 BP. XX AC M19465; X03885; XX DT 15-MAR-1994 (Rel. 38, Created) DT 15-JAN-2007 (Rel. 90, Last updated, Version 7) XX DE Plasmid pUB110 (from S.aureus) complete genome. XX KW circular; complete genome; neomycin resistance. XX OS Plasmid pUB110 OC other sequences; plasmids. OG Plasmid pUB110 XX RN [1] RP 1-4548 RX DOI; 10.1016/0147-619X(86)90046-6. RX PUBMED; 3010356. RA McKenzie T., Hoshino T., Tanaka T., Sueoka N.; RT "The nucleotide sequence of pUB110: some salient features in relation to RT replication and its regulation"; RL Plasmid 15(2):93-103(1986). XX RN [2] RP 1-4548 RX DOI; 10.1016/0147-619X(87)90015-1. RX PUBMED; 3033723. RA McKenzie T., Hoshino T., Tanaka T., Sueoka N.; RT "Correction. A revision of the nucleotide sequence and functional map of RT pUB110"; RL Plasmid 17(1):83-85(1987). XX CC On Feb 26, 2002 this sequence version replaced gi:46654. CC Draft entry and computer-readable sequence for [1] kindly provided CC by T.L.McKenzie, 20-JUN-1988. CC SWISS-PROT; P05061; REPB$STAAU. CC [2] revises [1]. XX FH Key Location/Qualifiers FH FT source 1..4548 FT /organism="Plasmid pUB110" FT /plasmid="pUB110" FT /host="Staphylococcus aureus" FT /mol_type="genomic DNA" FT /db_xref="taxon:2655" FT CDS complement(1581..1979) FT /codon_start=1 FT /transl_table=11 FT /product="gamma-protein" FT /note="putative" FT /db_xref="GOA:Q7DJ53" FT /db_xref="InterPro:IPR000335" FT /db_xref="UniProtKB/Swiss-Prot:Q7DJ53" FT /protein_id="AAA88360.1" FT /translation="MLQSIPALPVGDIKKSIGFYCDKLGFTLVHHEDGFAVLMCNEVRI FT HLWEASDEGWRSRSNDSPVCTGAESFIAGTASCRIEVEGIDELYQHIKPLGILHPNTSL FT KDQWWDERDFAVIDPDNNLISFFQQIKS" FT CDS complement(2202..2963) FT /codon_start=1 FT /transl_table=11 FT /product="neomycin resistance protein" FT /db_xref="GOA:P05057" FT /db_xref="InterPro:IPR002934" FT /db_xref="InterPro:IPR012481" FT /db_xref="PDB:1KAN" FT /db_xref="PDB:1KNY" FT /db_xref="UniProtKB/Swiss-Prot:P05057" FT /protein_id="AAA88361.1" FT /translation="MNGPIIMTREERMKIVHEIKERILDKYGDDVKAIGVYGSLGRQTD FT GPYSDIEMMCVMSTEEAEFSHEWTTGEWKVEVNFDSEEILLDYASQVESDWPLTHGQFF FT SILPIYDSGGYLEKVYQTAKSVEAQTFHDAICALIVEELFEYAGKWRNIRVQGPTTFLP FT SLTVQVAMAGAMLIGLHHRICYTTSASVLTEAVKQSDLPSGYDHLCQFVMSGQLSDSEK FT LLESLENFWNGIQEWTERHGYIVDVSKRIPF" FT CDS complement(3132..4136) FT /codon_start=1 FT /transl_table=11 FT /product="alpha protein" FT /note="putative" FT /db_xref="GOA:P0A0C3" FT /db_xref="InterPro:IPR000989" FT /db_xref="UniProtKB/Swiss-Prot:P0A0C3" FT /protein_id="AAA88362.1" FT /translation="MGVSFNIMCPNSSIYSDEKSRVLVDKTKSGKVRPWREKKIANVDY FT FELLHILEFKKAERVKDCAEILEYKQNRETGERKLYRVWFCKSRLCPMCNWRRAMKHGI FT QSQKVVAEVIKQKPTVRWLFLTLTVKNVYDGEELNKSLSDMAQGFRRMMQYKKINKNLV FT GFMRATEVTINNKDNSYNQHMHVLVCVEPTYFKNTENYVNQKQWIQFWKKAMKLDYDPN FT VKVQMIRPKNKYKSDIQSAIDETAKYPVKDTDFMTDDEEKNLKRLSDLEEGLHRKRLIS FT YGGLLKEIHKKLNLDDTEEGDLIHTDDDEKADEDGFSIIAMWNWERKNYFIKE" FT CDS complement(join(4360..4548,1..1074)) FT /codon_start=1 FT /transl_table=11 FT /product="beta protein" FT /db_xref="GOA:P0A0C7" FT /db_xref="InterPro:IPR001668" FT /db_xref="UniProtKB/Swiss-Prot:P0A0C7" FT /protein_id="AAA88359.1" FT /translation="MSYAVCRMQKVKSAGLKGMQFHNQRERKSRTNDDIDHERTRENYD FT LKNDKNIDYNERVKEIIESQKTGTRKTRKDAVLVNELLVTSDRDFFEQLDPGEQKRFFE FT ESYKLFSERYGKQNIAYATVHNDEQTPHMHLGVVPMRDGKLQGKNVFNRQELLWLQDKF FT PEHMKKQGFELKRGERGSDRKHIETAKFKKQTLEKEIDFLEKNLAVKKDEWTAYSDKVK FT SDLEVPAKRHMKSVEVPTGEKSMFGLGKEIMKTEKKPTKNVVISERDYKNLVTAARDND FT RLKQHVRNLMSTDMAREYKKLSKEHGQVKEKYSGLVERFNENVNDYNELLEENKSLKSK FT ISDLKRDVSLIYESTKEFLKERTDGLKAFKNVFKGFVDKVKDKTAQFQEKHDLEPKKNE FT FELTHNREVKKERSRDQGMSL" XX SQ Sequence 4548 BP; 1307 A; 1000 C; 624 G; 1617 T; 0 other; gaattcctta gtgctttcat agattaaact cacatcacgc tttaaatcgc ttattttaga 60 ctttaaagac ttgttttctt caagcaactc attataatca tttacatttt cattaaatcg 120 ctctacaaga ccactatatt tttctttaac ttgcccatgt tctttactta attttttata 180 ttctctcgcc atatcagtac tcatgagatt tctaacatgc tgttttaacc tatcgttatc 240 tctcgcagca gtcactaagt ttttataatc acgctccgat ataacaacat ttttggttgg 300 tttcttttct gttttcatta tttcttttcc caaaccaaac atggactttt cacccgttgg 360 cacttcaaca cttttcatgt gtcgtttcgc tggtacttct aaatctgatt taactttatc 420 gctataagca gtccattcat cttttttaac tgctaaattt ttttctagaa aatcaatctc 480 tttttccaaa gtttgttttt taaatttagc tgtctcaata tgtttacggt cagagccacg 540 ttcaccacgc ttcaactcaa aaccctgttt tttcatatgc tcggggaatt tatcttgtag 600 ccataacagt tcttgacgat taaacacatt ttttccttgc agttttccat cacgcatagg 660 cacaacacct aaatgcatgt gaggggtttg ctcatcatta tgaactgttg cataagcaat 720 attttgcttg ccatatcgtt cggaaaataa tttataactt tcctcaaaaa atcgtttttg 780 ttctcctgga tccagttgct caaaaaaatc tcggtcagat gttactagca actcatttac 840 aagaacagca tctttcctcg tttttcttgt acctgttttt tgtgattcaa taatttcttt 900 gacacgttcg ttgtaatcaa tatttttatc atttttcaaa tcataatttt cacgtgttcg 960 ctcatggtca atatcatcat tcgttctact ttttcgctct ctttgattat gaaattgcat 1020 gccttttagt ccagctgatt tcactttttg cattctacaa actgcataac tcatatgtaa 1080 atcgctcctt tttaggtggc acaaatgtga ggcattttcg ctctttccgg caaccacttc 1140 caagtaaagt ataacacact atactttata ttcataaagt gtgtgctctg cgaggctgtc 1200 ggcagtgccg accaaaacca taaaaccttt aagacctttc ttttttttac gagaaaaaag 1260 aaacaaaaaa acctgccctc tgccacctca gcaaaggggg gttttgctct cgtgctcgtt 1320 taaaaatcag caagggacag gtagtatttt ttgagaagat cactcaaaaa atctccacct 1380 ttaaaccctt gccaattttt attttgtccg ttttgtctag cttaccgaaa gccagactca 1440 gcaagaataa aatttttatt gtctttcggt tttctagtgt aacggacaaa accactcaaa 1500 ataaaaaaga tacaagagag gtctctcgta tcttttattc agcaatcgcg cccgattgct 1560 gaacagatta ataatagatt ttagcttttt atttgttgaa aaaagctaat caaattgttg 1620 tcgggatcaa ttactgcaaa gtctcgttca tcccaccact gatcttttaa tgatgtattg 1680 gggtgcaaaa tgcccaaagg cttaatatgt tgatataatt catcaattcc ctctacttca 1740 atgcggcaac tagcagtacc agcaataaac gactccgcac ctgtacaaac cggtgaatca 1800 ttactacgag agcgccagcc ttcatcactt gcctcccata gatgaatccg aacctcatta 1860 cacattagaa ctgcgaatcc atcttcatgg tgaaccaaag tgaaacctag tttatcgcaa 1920 taaaaaccta tactcttttt aatatccccg actggcaatg ccgggataga ctgtaacatt 1980 ctcacgcata aaatcccctt tcattttcta atgtaaatct attaccttat tattaattca 2040 attcgctcat aattaatcct ttttcttatt acgcaaaatg gcccgattta agcacaccct 2100 ttattccgtt aatgcgccat gacagccatg ataattacta atactaggag aagttaataa 2160 atacgtaacc aacatgatta acaattatta gaggtcatcg ttcaaaatgg tatgcgtttt 2220 gacacatcca ctatatatcc gtgtcgttct gtccactcct gaatcccatt ccagaaattc 2280 tctagcgatt ccagaagttt ctcagagtcg gaaagttgac cagacattac gaactggcac 2340 agatggtcat aacctgaagg aagatctgat tgcttaactg cttcagttaa gaccgaagcg 2400 ctcgtcgtat aacagatgcg atgatgcaga ccaatcaaca tggcacctgc cattgctacc 2460 tgtacagtca aggatggtag aaatgttgtc ggtccttgca cacgaatatt acgccatttg 2520 cctgcatatt caaacagctc ttctacgata agggcacaaa tcgcatcgtg gaacgtttgg 2580 gcttctaccg atttagcagt ttgatacact ttctctaagt atccacctga atcataaatc 2640 ggcaaaatag agaaaaattg accatgtgta agcggccaat ctgattccac ctgagatgca 2700 taatctagta gaatctcttc gctatcaaaa ttcacttcca ccttccactc accggttgtc 2760 cattcatggc tgaactctgc ttcctctgtt gacatgacac acatcatctc aatatccgaa 2820 tagggcccat cagtctgacg accaagagag ccataaacac caatagcctt aacatcatcc 2880 ccatatttat ccaatattcg ttccttaatt tcatgaacaa tcttcattct ttcttctcta 2940 gtcattatta ttggtccatt cactattctc attccctttt cagataattt tagatttgct 3000 tttctaaata agaatatttg gagagcaccg ttcttattca gctattaata actcgtcttc 3060 ctaagcatcc ttcaatcctt ttaataacaa ttatagcatc taatcttcaa caaactggcc 3120 cgtttgttga actactcttt aataaaataa tttttccgtt cccaattcca cattgcaata 3180 atagaaaatc catcttcatc ggctttttcg tcatcatctg tatgaatcaa atcgccttct 3240 tctgtgtcat caaggtttaa ttttttatgt atttctttta acaaaccacc ataggagatt 3300 aaccttttac ggtgtaaacc ttcctccaaa tcagacaaac gtttcaaatt cttttcttca 3360 tcatcggtca taaaatccgt atcctttaca ggatattttg cagtttcgtc aattgccgat 3420 tgtatatccg atttatattt atttttcggt cgaatcattt gaacttttac atttggatca 3480 tagtctaatt tcattgcctt tttccaaaat tgaatccatt gtttttgatt cacgtagttt 3540 tctgtattct taaaataagt tggttccaca cataccaata catgcatgtg ctgattataa 3600 gaattatctt tattatttat tgtcacttcc gttgcacgca taaaaccaac aagattttta 3660 ttaatttttt tatattgcat cattcggcga aatccttgag ccatatctga caaactctta 3720 tttaattctt cgccatcata aacattttta actgttaatg tgagaaacaa ccaacgaact 3780 gttggctttt gtttaataac ttcagcaaca accttttgtg actgaatgcc atgtttcatt 3840 gctctcctcc agttgcacat tggacaaagc ctggatttac aaaaccacac tcgatacaac 3900 tttctttcgc ctgtttcacg attttgttta tactctaata tttcagcaca atcttttact 3960 ctttcagcct ttttaaattc aagaatatgc agaagttcaa agtaatcaac attagcgatt 4020 ttcttttctc tccatggtct cacttttcca ctttttgtct tgtccactaa aacccttgat 4080 ttttcatctg aataaatgct actattagga cacataatat taaaagaaac ccccatctat 4140 ttagttattt gtttagtcac ttataacttt aacagatggg gtttttctgt gcaaccaatt 4200 ttaagggttt tcaatacttt aaaacacata cataccaaca cttcaacgca cctttcagca 4260 actaaaataa aaatgacgtt atttctatat gtatcaagat aagaaagaac aagttcaaaa 4320 ccatcaaaaa aagacacctt ttcaggtgct ttttttattt tataaactca ttccctgatc 4380 tcgacttcgt tcttttttta cctctcggtt atgagttagt tcaaattcgt tctttttagg 4440 ttctaaatcg tgtttttctt ggaattgtgc tgttttatcc tttaccttgt ctacaaaccc 4500 cttaaaaacg tttttaaagg cttttaagcc gtctgtacgt tccttaag 4548 //